RNA–Protein interactions for RNA: ENST00000563560.1

RPUSD1-204, Transcript of RNA pseudouridylate synthase domain containing 1, humanhuman

TSL 2

Gene RPUSD1, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD1-204ENST00000563560 C6orf203Q9P0P8 240 aaPredicted RBP13.1□□□□□ -0.31
RPUSD1-204ENST00000563560 ZNF232Q9UNY5 417 aa13.1□□□□□ -0.31
RPUSD1-204ENST00000563560 GPR52Q9Y2T5 361 aa13.1□□□□□ -0.31
RPUSD1-204ENST00000563560 DSCAMO60469 2012 aa13.1□□□□□ -0.31
RPUSD1-204ENST00000563560 TMEM247A6NEH6 219 aa13.09□□□□□ -0.31
RPUSD1-204ENST00000563560 EVPLLA8MZ36 301 aa13.09□□□□□ -0.31
RPUSD1-204ENST00000563560 ATE1O95260 518 aa13.09□□□□□ -0.31
RPUSD1-204ENST00000563560 LYPD3O95274 346 aa13.09□□□□□ -0.31
RPUSD1-204ENST00000563560 TFPIP10646 304 aa13.09□□□□□ -0.31
RPUSD1-204ENST00000563560 CD247P20963 164 aa13.09□□□□□ -0.31
RPUSD1-204ENST00000563560 FPR1P21462 350 aa13.09□□□□□ -0.31
RPUSD1-204ENST00000563560 ADSLP30566 484 aaPredicted RBP13.09□□□□□ -0.31
RPUSD1-204ENST00000563560 SF3A3Q12874 501 aaKnown RBP eCLIP13.09□□□□□ -0.315e-6■■■■■ 39.5
RPUSD1-204ENST00000563560 NFYCQ13952 458 aa13.09□□□□□ -0.31
RPUSD1-204ENST00000563560 POU4F3Q15319 338 aa13.09□□□□□ -0.31
RPUSD1-204ENST00000563560 TSC22D1Q15714 1073 aa13.09□□□□□ -0.31
RPUSD1-204ENST00000563560 NPTX1Q15818 432 aa13.09□□□□□ -0.31
RPUSD1-204ENST00000563560 DUSP7Q16829 419 aa13.09□□□□□ -0.31
RPUSD1-204ENST00000563560 SFRP5Q5T4F7 317 aa13.09□□□□□ -0.31
RPUSD1-204ENST00000563560 REP15Q6BDI9 236 aa13.09□□□□□ -0.31
RPUSD1-204ENST00000563560 PAQR6Q6TCH4 344 aa13.09□□□□□ -0.31
RPUSD1-204ENST00000563560 OR4D11Q8NGI4 311 aa13.09□□□□□ -0.31
RPUSD1-204ENST00000563560 ZNF775Q96BV0 537 aaPredicted RBP13.09□□□□□ -0.31
RPUSD1-204ENST00000563560 DDIT4LQ96D03 193 aa13.09□□□□□ -0.31
RPUSD1-204ENST00000563560 MBD6Q96DN6 1003 aa13.09□□□□□ -0.31
RPUSD1-204ENST00000563560 REXO5Q96IC2 774 aaKnown RBP13.09□□□□□ -0.31
RPUSD1-204ENST00000563560 TMEM204Q9BSN7 226 aa13.09□□□□□ -0.31
RPUSD1-204ENST00000563560 KLHL4Q9C0H6 718 aa13.09□□□□□ -0.31
RPUSD1-204ENST00000563560 ACTR6Q9GZN1 396 aa13.09□□□□□ -0.31
RPUSD1-204ENST00000563560 PLCE1Q9P212 2302 aa13.09□□□□□ -0.31
RPUSD1-204ENST00000563560 FLVCR1Q9Y5Y0 555 aa13.09□□□□□ -0.31
RPUSD1-204ENST00000563560 ACANP16112 2415 aa13.09□□□□□ -0.31
RPUSD1-204ENST00000563560 ALPK2Q86TB3 2170 aa13.08□□□□□ -0.31
RPUSD1-204ENST00000563560 AQP7P3A6NL99 342 aa13.08□□□□□ -0.32
RPUSD1-204ENST00000563560 A8MVM7 634 aa13.08□□□□□ -0.32
RPUSD1-204ENST00000563560 SLC22A2O15244 555 aa13.08□□□□□ -0.32
RPUSD1-204ENST00000563560 CNOT4O95628 575 aaKnown RBP13.08□□□□□ -0.32
RPUSD1-204ENST00000563560 LGI1O95970 557 aa13.08□□□□□ -0.32
RPUSD1-204ENST00000563560 VIMP08670 466 aaKnown RBP13.08□□□□□ -0.32
RPUSD1-204ENST00000563560 UQCRBP14927 111 aa13.08□□□□□ -0.32
RPUSD1-204ENST00000563560 PPP3CBP16298 524 aa13.08□□□□□ -0.32
RPUSD1-204ENST00000563560 IGHV1-2P23083 117 aa13.08□□□□□ -0.32
RPUSD1-204ENST00000563560 SLC6A2P23975 617 aa13.08□□□□□ -0.32
RPUSD1-204ENST00000563560 PCGF2P35227 344 aa13.08□□□□□ -0.32
RPUSD1-204ENST00000563560 KCNJ5P48544 419 aa13.08□□□□□ -0.32
RPUSD1-204ENST00000563560 SLC35A1P78382 337 aa13.08□□□□□ -0.32
RPUSD1-204ENST00000563560 NRF1Q16656 503 aa13.08□□□□□ -0.32
RPUSD1-204ENST00000563560 RABL3Q5HYI8 236 aa13.08□□□□□ -0.32
RPUSD1-204ENST00000563560 LINC00114Q6XXX2 140 aa13.08□□□□□ -0.32
RPUSD1-204ENST00000563560 CCDC80Q76M96 950 aa13.08□□□□□ -0.32
RPUSD1-204ENST00000563560 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.08□□□□□ -0.32
RPUSD1-204ENST00000563560 CADM2Q8N3J6 435 aa13.08□□□□□ -0.32
RPUSD1-204ENST00000563560 TMEM99Q8N816 258 aa13.08□□□□□ -0.32
RPUSD1-204ENST00000563560 PIGXQ8TBF5 258 aa13.08□□□□□ -0.32
RPUSD1-204ENST00000563560 STK35Q8TDR2 534 aa13.08□□□□□ -0.32
RPUSD1-204ENST00000563560 S100PBPQ96BU1 408 aa13.08□□□□□ -0.32
RPUSD1-204ENST00000563560 LRRC58Q96CX6 371 aa13.08□□□□□ -0.32
RPUSD1-204ENST00000563560 ZNF583Q96ND8 569 aa13.08□□□□□ -0.32
RPUSD1-204ENST00000563560 ARHGDIGQ99819 225 aa13.08□□□□□ -0.32
RPUSD1-204ENST00000563560 MED18Q9BUE0 208 aa13.08□□□□□ -0.32
RPUSD1-204ENST00000563560 USP22Q9UPT9 525 aa13.08□□□□□ -0.32
RPUSD1-204ENST00000563560 MTORP42345 2549 aa13.08□□□□□ -0.32
RPUSD1-204ENST00000563560 ZFHX3Q15911 3703 aa13.08□□□□□ -0.32
RPUSD1-204ENST00000563560 A0A0B4J2E0 115 aa13.07□□□□□ -0.32
RPUSD1-204ENST00000563560 A0A1B0GWA3 101 aa13.07□□□□□ -0.32
RPUSD1-204ENST00000563560 A0A1B0GX12 115 aa13.07□□□□□ -0.32
RPUSD1-204ENST00000563560 BBIP1A8MTZ0 92 aa13.07□□□□□ -0.32
RPUSD1-204ENST00000563560 C5orf58C9J3I9 102 aa13.07□□□□□ -0.32
RPUSD1-204ENST00000563560 EIF1BO60739 113 aaKnown RBP13.07□□□□□ -0.32
RPUSD1-204ENST00000563560 ADAP00813 363 aa13.07□□□□□ -0.32
RPUSD1-204ENST00000563560 NPPAP01160 153 aa13.07□□□□□ -0.32
RPUSD1-204ENST00000563560 THY1P04216 161 aa13.07□□□□□ -0.32
RPUSD1-204ENST00000563560 CD53P19397 219 aa13.07□□□□□ -0.32
RPUSD1-204ENST00000563560 CXCR1P25024 350 aa13.07□□□□□ -0.32
RPUSD1-204ENST00000563560 AQP1P29972 269 aa13.07□□□□□ -0.32
RPUSD1-204ENST00000563560 IDUAP35475 653 aa13.07□□□□□ -0.32
RPUSD1-204ENST00000563560 FOXG1P55316 489 aaPredicted RBP13.07□□□□□ -0.32
RPUSD1-204ENST00000563560 OR2B6P58173 313 aa13.07□□□□□ -0.32
RPUSD1-204ENST00000563560 CEACAM7Q14002 265 aa13.07□□□□□ -0.32
RPUSD1-204ENST00000563560 P2RY6Q15077 328 aa13.07□□□□□ -0.32
RPUSD1-204ENST00000563560 C1orf140Q5VVS0 124 aa13.07□□□□□ -0.32
RPUSD1-204ENST00000563560 C8orf82Q6P1X6 216 aaPredicted RBP13.07□□□□□ -0.32
RPUSD1-204ENST00000563560 NHLRC1Q6VVB1 395 aa13.07□□□□□ -0.32
RPUSD1-204ENST00000563560 GALNT5Q7Z7M9 940 aa13.07□□□□□ -0.32
RPUSD1-204ENST00000563560 STK32CQ86UX6 486 aa13.07□□□□□ -0.32
RPUSD1-204ENST00000563560 SNX32Q86XE0 403 aa13.07□□□□□ -0.32
RPUSD1-204ENST00000563560 TREML1Q86YW5 311 aa13.07□□□□□ -0.32
RPUSD1-204ENST00000563560 KRTAP1-3Q8IUG1 177 aa13.07□□□□□ -0.32
RPUSD1-204ENST00000563560 C11orf65Q8NCR3 313 aa13.07□□□□□ -0.32
RPUSD1-204ENST00000563560 OR8J3Q8NGG0 315 aa13.07□□□□□ -0.32
RPUSD1-204ENST00000563560 OR10A6Q8NH74 314 aa13.07□□□□□ -0.32
RPUSD1-204ENST00000563560 SLC38A4Q969I6 547 aa13.07□□□□□ -0.32
RPUSD1-204ENST00000563560 TMEM45BQ96B21 275 aa13.07□□□□□ -0.32
RPUSD1-204ENST00000563560 TAMM41Q96BW9 452 aa13.07□□□□□ -0.32
RPUSD1-204ENST00000563560 FOXC2Q99958 501 aa13.07□□□□□ -0.32
RPUSD1-204ENST00000563560 AMBRA1Q9C0C7 1298 aa13.07□□□□□ -0.32
RPUSD1-204ENST00000563560 CCM2LQ9NUG4 571 aaPredicted RBP13.07□□□□□ -0.32
RPUSD1-204ENST00000563560 MRGBPQ9NV56 204 aa13.07□□□□□ -0.32
RPUSD1-204ENST00000563560 ZNF226Q9NYT6 803 aa13.07□□□□□ -0.32
RPUSD1-204ENST00000563560 MALT1Q9UDY8 824 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms