RNA–Protein interactions for RNA: ENST00000563418.2

CLK3-212, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 10,498 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-212ENST00000563418 EDN3P14138 238 aa5.85□□□□□ -1.47
CLK3-212ENST00000563418 DAOP14920 347 aa5.85□□□□□ -1.47
CLK3-212ENST00000563418 SLC16A14Q7RTX9 510 aa5.85□□□□□ -1.47
CLK3-212ENST00000563418 VSIG10LQ86VR7 867 aa5.85□□□□□ -1.47
CLK3-212ENST00000563418 C1orf127Q8N9H9 656 aa5.85□□□□□ -1.47
CLK3-212ENST00000563418 OR5AK3PQ8NH89 298 aa5.85□□□□□ -1.47
CLK3-212ENST00000563418 ZNF516Q92618 1163 aa5.85□□□□□ -1.47
CLK3-212ENST00000563418 GNPNAT1Q96EK6 184 aaPredicted RBP5.85□□□□□ -1.47
CLK3-212ENST00000563418 LRIG1Q96JA1 1093 aa5.85□□□□□ -1.47
CLK3-212ENST00000563418 DDA1Q9BW61 102 aa5.85□□□□□ -1.47
CLK3-212ENST00000563418 HRASLSQ9HDD0 168 aa5.85□□□□□ -1.47
CLK3-212ENST00000563418 SLC6A14Q9UN76 642 aa5.85□□□□□ -1.47
CLK3-212ENST00000563418 LSM5Q9Y4Y9 91 aaKnown RBP5.85□□□□□ -1.47
CLK3-212ENST00000563418 ARRB2P32121 409 aa5.85□□□□□ -1.47
CLK3-212ENST00000563418 MASP1P48740 699 aa5.85□□□□□ -1.47
CLK3-212ENST00000563418 THBS3P49746 956 aa5.85□□□□□ -1.47
CLK3-212ENST00000563418 ECH1Q13011 328 aa5.85□□□□□ -1.47
CLK3-212ENST00000563418 TMEM130Q8N3G9 435 aa5.85□□□□□ -1.47
CLK3-212ENST00000563418 OR8J2Q8NGG1 315 aa5.85□□□□□ -1.47
CLK3-212ENST00000563418 OR14L1PQ8NHC6 308 aa5.85□□□□□ -1.47
CLK3-212ENST00000563418 TMED6Q8WW62 240 aa5.85□□□□□ -1.47
CLK3-212ENST00000563418 SMPDL3BQ92485 455 aa5.85□□□□□ -1.47
CLK3-212ENST00000563418 AKR1E2Q96JD6 320 aa5.85□□□□□ -1.47
CLK3-212ENST00000563418 C20orf24Q9BUV8 137 aa5.85□□□□□ -1.47
CLK3-212ENST00000563418 PLEKHA2Q9HB19 425 aa5.85□□□□□ -1.47
CLK3-212ENST00000563418 FZD9O00144 591 aa5.85□□□□□ -1.47
CLK3-212ENST00000563418 PIRTP0C851 137 aa5.85□□□□□ -1.47
CLK3-212ENST00000563418 CD37P11049 281 aa5.85□□□□□ -1.47
CLK3-212ENST00000563418 ABOP16442 354 aa5.85□□□□□ -1.47
CLK3-212ENST00000563418 CAV2P51636 162 aa5.85□□□□□ -1.47
CLK3-212ENST00000563418 OR4D1Q15615 310 aa5.85□□□□□ -1.47
CLK3-212ENST00000563418 GUCA2BQ16661 112 aa5.85□□□□□ -1.47
CLK3-212ENST00000563418 NHLRC3Q5JS37 347 aa5.85□□□□□ -1.47
CLK3-212ENST00000563418 TOMM20LQ6UXN7 152 aa5.85□□□□□ -1.47
CLK3-212ENST00000563418 Q6ZRG5 221 aa5.85□□□□□ -1.47
CLK3-212ENST00000563418 ANGPTL5Q86XS5 388 aa5.85□□□□□ -1.47
CLK3-212ENST00000563418 TGIF2LXQ8IUE1 241 aa5.85□□□□□ -1.47
CLK3-212ENST00000563418 FAM26EQ8N5C1 309 aa5.85□□□□□ -1.47
CLK3-212ENST00000563418 NLGN4YQ8NFZ3 816 aaPredicted RBP5.85□□□□□ -1.47
CLK3-212ENST00000563418 POM121Q96HA1 1249 aa5.85□□□□□ -1.47
CLK3-212ENST00000563418 RAB11FIP5Q9BXF6 653 aa5.85□□□□□ -1.47
CLK3-212ENST00000563418 IKZF4Q9H2S9 585 aa5.85□□□□□ -1.47
CLK3-212ENST00000563418 ZCCHC4Q9H5U6 513 aa5.85□□□□□ -1.47
CLK3-212ENST00000563418 RPH3ALQ9UNE2 315 aa5.85□□□□□ -1.47
CLK3-212ENST00000563418 PLCH1Q4KWH8 1693 aa5.85□□□□□ -1.47
CLK3-212ENST00000563418 COL1A2P08123 1366 aa5.85□□□□□ -1.47
CLK3-212ENST00000563418 XKRY2A2RUG3 117 aa5.85□□□□□ -1.47
CLK3-212ENST00000563418 RAB27BO00194 218 aa5.85□□□□□ -1.47
CLK3-212ENST00000563418 NCR1O76036 304 aa5.85□□□□□ -1.47
CLK3-212ENST00000563418 CST3P01034 146 aaPredicted RBP5.85□□□□□ -1.47
CLK3-212ENST00000563418 SERPINA7P05543 415 aa5.85□□□□□ -1.47
CLK3-212ENST00000563418 MMP11P24347 488 aa5.85□□□□□ -1.47
CLK3-212ENST00000563418 UBE2MP61081 183 aaKnown RBP5.85□□□□□ -1.47
CLK3-212ENST00000563418 HNRNPKP61978 463 aaKnown RBP eCLIP5.85□□□□□ -1.47
CLK3-212ENST00000563418 ZNF252P-AS1Q0IIN9 211 aa5.85□□□□□ -1.47
CLK3-212ENST00000563418 HLA-DQA1Q5Y7H0 255 aa5.85□□□□□ -1.47
CLK3-212ENST00000563418 LCTLQ6UWM7 567 aa5.85□□□□□ -1.47
CLK3-212ENST00000563418 MON1AQ86VX9 555 aa5.85□□□□□ -1.47
CLK3-212ENST00000563418 SLX4Q8IY92 1834 aa5.85□□□□□ -1.47
CLK3-212ENST00000563418 BLOC1S5-TXNDC5H3BN57 136 aa5.85□□□□□ -1.47
CLK3-212ENST00000563418 SDHBP21912 280 aa5.85□□□□□ -1.47
CLK3-212ENST00000563418 ZNF626Q68DY1 528 aa5.85□□□□□ -1.47
CLK3-212ENST00000563418 C15orf39Q6ZRI6 1047 aa5.85□□□□□ -1.47
CLK3-212ENST00000563418 OR56B2PQ8NGI1 322 aa5.85□□□□□ -1.47
CLK3-212ENST00000563418 MAL2Q969L2 176 aa5.85□□□□□ -1.47
CLK3-212ENST00000563418 NPIPB9F8W1W9 429 aa5.84□□□□□ -1.47
CLK3-212ENST00000563418 CTSLP07711 333 aa5.84□□□□□ -1.47
CLK3-212ENST00000563418 TBXA2RP21731 343 aa5.84□□□□□ -1.47
CLK3-212ENST00000563418 GABRR1P24046 479 aa5.84□□□□□ -1.47
CLK3-212ENST00000563418 AGTR2P50052 363 aa5.84□□□□□ -1.47
CLK3-212ENST00000563418 HBA1P69905 142 aa5.84□□□□□ -1.47
CLK3-212ENST00000563418 CXADRP78310 365 aa5.84□□□□□ -1.47
CLK3-212ENST00000563418 EIF2B1Q14232 305 aaKnown RBP5.84□□□□□ -1.47
CLK3-212ENST00000563418 ALG10BQ5I7T1 473 aa5.84□□□□□ -1.47
CLK3-212ENST00000563418 OR7E24Q6IFN5 339 aa5.84□□□□□ -1.47
CLK3-212ENST00000563418 GLB1LQ6UWU2 654 aa5.84□□□□□ -1.47
CLK3-212ENST00000563418 TMPRSS7Q7RTY8 843 aa5.84□□□□□ -1.47
CLK3-212ENST00000563418 SERINC5Q86VE9 423 aa5.84□□□□□ -1.47
CLK3-212ENST00000563418 SLC35F2Q8IXU6 374 aa5.84□□□□□ -1.47
CLK3-212ENST00000563418 GPX8Q8TED1 209 aa5.84□□□□□ -1.47
CLK3-212ENST00000563418 SENP5Q96HI0 755 aaPredicted RBP5.84□□□□□ -1.47
CLK3-212ENST00000563418 OR51I2Q9H344 312 aa5.84□□□□□ -1.47
CLK3-212ENST00000563418 USP36Q9P275 1121 aaKnown RBP5.84□□□□□ -1.47
CLK3-212ENST00000563418 GABRR3A8MPY1 467 aa5.84□□□□□ -1.47
CLK3-212ENST00000563418 B3GAT3O94766 335 aa5.84□□□□□ -1.47
CLK3-212ENST00000563418 NUDT14O95848 222 aa5.84□□□□□ -1.47
CLK3-212ENST00000563418 CSNK2A2P19784 350 aaPredicted RBP5.84□□□□□ -1.47
CLK3-212ENST00000563418 ADIRFQ15847 76 aa5.84□□□□□ -1.47
CLK3-212ENST00000563418 ATP6V1FQ16864 119 aa5.84□□□□□ -1.47
CLK3-212ENST00000563418 OR2A2Q6IF42 318 aa5.84□□□□□ -1.47
CLK3-212ENST00000563418 GPC2Q8N158 579 aa5.84□□□□□ -1.47
CLK3-212ENST00000563418 FAM86B1Q8N7N1 296 aa5.84□□□□□ -1.47
CLK3-212ENST00000563418 HASPINQ8TF76 798 aa5.84□□□□□ -1.47
CLK3-212ENST00000563418 NTMT1Q9BV86 223 aa5.84□□□□□ -1.47
CLK3-212ENST00000563418 NMNAT2Q9BZQ4 307 aa5.84□□□□□ -1.47
CLK3-212ENST00000563418 RNF167Q9H6Y7 350 aa5.84□□□□□ -1.47
CLK3-212ENST00000563418 SYNPO2LQ9H987 977 aa5.84□□□□□ -1.47
CLK3-212ENST00000563418 NCDNQ9UBB6 729 aa5.84□□□□□ -1.47
CLK3-212ENST00000563418 MRPS33Q9Y291 106 aaKnown RBP5.84□□□□□ -1.47
CLK3-212ENST00000563418 CSAG2Q9Y5P2 127 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms