RNA–Protein interactions for RNA: ENST00000563184.1

LINC00557-201, long intergenic non-protein coding RNA 557, humanhuman

BASIC

Gene LINC00557, Length 1,279 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00557-201ENST00000563184 A6NIZ1 184 aa3.73□□□□□ -1.81
LINC00557-201ENST00000563184 A8MUA0 341 aa3.73□□□□□ -1.81
LINC00557-201ENST00000563184 GFYI3L273 518 aa3.73□□□□□ -1.81
LINC00557-201ENST00000563184 MBTPS2O43462 519 aa3.73□□□□□ -1.81
LINC00557-201ENST00000563184 TRAF3IP2O43734 574 aaPredicted RBP3.73□□□□□ -1.81
LINC00557-201ENST00000563184 RAMP3O60896 148 aa3.73□□□□□ -1.81
LINC00557-201ENST00000563184 NPIPB7O75200 414 aa3.73□□□□□ -1.81
LINC00557-201ENST00000563184 OPN1MWP04001 364 aa3.73□□□□□ -1.81
LINC00557-201ENST00000563184 ZNF853P0CG23 659 aa3.73□□□□□ -1.81
LINC00557-201ENST00000563184 OPN1MW2P0DN77 364 aa3.73□□□□□ -1.81
LINC00557-201ENST00000563184 OPN1MW3P0DN78 364 aa3.73□□□□□ -1.81
LINC00557-201ENST00000563184 POU2F1P14859 743 aa3.73□□□□□ -1.81
LINC00557-201ENST00000563184 NCK1P16333 377 aa3.73□□□□□ -1.81
LINC00557-201ENST00000563184 AZU1P20160 251 aa3.73□□□□□ -1.81
LINC00557-201ENST00000563184 ATP6V1B2P21281 511 aa3.73□□□□□ -1.81
LINC00557-201ENST00000563184 CCNE1P24864 410 aa3.73□□□□□ -1.81
LINC00557-201ENST00000563184 ANXA13P27216 316 aa3.73□□□□□ -1.81
LINC00557-201ENST00000563184 SHMT2P34897 504 aa3.73□□□□□ -1.81
LINC00557-201ENST00000563184 CTRLP40313 264 aa3.73□□□□□ -1.81
LINC00557-201ENST00000563184 NUP107P57740 925 aa3.73□□□□□ -1.81
LINC00557-201ENST00000563184 RAP1BP61224 184 aa3.73□□□□□ -1.81
LINC00557-201ENST00000563184 TGFBR3Q03167 851 aa3.73□□□□□ -1.81
LINC00557-201ENST00000563184 VGLL4Q14135 290 aa3.73□□□□□ -1.81
LINC00557-201ENST00000563184 PDK3Q15120 406 aa3.73□□□□□ -1.81
LINC00557-201ENST00000563184 EXOC3L2Q2M3D2 409 aa3.73□□□□□ -1.81
LINC00557-201ENST00000563184 C1orf100Q5SVJ3 147 aa3.73□□□□□ -1.81
LINC00557-201ENST00000563184 CASC10Q5T4H9 136 aa3.73□□□□□ -1.81
LINC00557-201ENST00000563184 ZSCAN25Q6NSZ9 544 aa3.73□□□□□ -1.81
LINC00557-201ENST00000563184 Q6ZPB1 254 aaPredicted RBP3.73□□□□□ -1.81
LINC00557-201ENST00000563184 SLC34A3Q8N130 599 aa3.73□□□□□ -1.81
LINC00557-201ENST00000563184 FTMTQ8N4E7 242 aa3.73□□□□□ -1.81
LINC00557-201ENST00000563184 OR5D13Q8NGL4 314 aa3.73□□□□□ -1.81
LINC00557-201ENST00000563184 ELSPBP1Q96BH3 223 aa3.73□□□□□ -1.81
LINC00557-201ENST00000563184 PAGE5Q96GU1 130 aa3.73□□□□□ -1.81
LINC00557-201ENST00000563184 SEC22AQ96IW7 307 aa3.73□□□□□ -1.81
LINC00557-201ENST00000563184 CYYR1Q96J86 154 aa3.73□□□□□ -1.81
LINC00557-201ENST00000563184 SLC35E1Q96K37 410 aa3.73□□□□□ -1.81
LINC00557-201ENST00000563184 RNF2Q99496 336 aa3.73□□□□□ -1.81
LINC00557-201ENST00000563184 NPAS2Q99743 824 aa3.73□□□□□ -1.81
LINC00557-201ENST00000563184 TSG101Q99816 390 aa3.73□□□□□ -1.81
LINC00557-201ENST00000563184 TMEM43Q9BTV4 400 aa3.73□□□□□ -1.81
LINC00557-201ENST00000563184 CAPS2Q9BXY5 557 aa3.73□□□□□ -1.81
LINC00557-201ENST00000563184 PARD6BQ9BYG5 372 aa3.73□□□□□ -1.81
LINC00557-201ENST00000563184 RAB34Q9BZG1 259 aa3.73□□□□□ -1.81
LINC00557-201ENST00000563184 SELENOIQ9C0D9 397 aa3.73□□□□□ -1.81
LINC00557-201ENST00000563184 ASB8Q9H765 288 aa3.73□□□□□ -1.81
LINC00557-201ENST00000563184 ATP10AO60312 1499 aa3.73□□□□□ -1.81
LINC00557-201ENST00000563184 KRTAP4-16G5E9R7 235 aaPredicted RBP3.72□□□□□ -1.81
LINC00557-201ENST00000563184 ATP5LO75964 103 aa3.72□□□□□ -1.81
LINC00557-201ENST00000563184 ZNF17P17021 662 aa3.72□□□□□ -1.81
LINC00557-201ENST00000563184 CXCR2P25025 360 aa3.72□□□□□ -1.81
LINC00557-201ENST00000563184 HTR1EP28566 365 aa3.72□□□□□ -1.81
LINC00557-201ENST00000563184 DDOSTP39656 456 aa3.72□□□□□ -1.81
LINC00557-201ENST00000563184 RPL13AP40429 203 aaKnown RBP3.72□□□□□ -1.81
LINC00557-201ENST00000563184 ACTR1AP61163 376 aa3.72□□□□□ -1.81
LINC00557-201ENST00000563184 TIMM10P62072 90 aa3.72□□□□□ -1.81
LINC00557-201ENST00000563184 DPYSL2Q16555 572 aa3.72□□□□□ -1.81
LINC00557-201ENST00000563184 PDZK1Q5T2W1 519 aa3.72□□□□□ -1.81
LINC00557-201ENST00000563184 GDPD3Q7L5L3 318 aa3.72□□□□□ -1.81
LINC00557-201ENST00000563184 CCDC50Q8IVM0 306 aa3.72□□□□□ -1.81
LINC00557-201ENST00000563184 DCAF4L2Q8NA75 395 aa3.72□□□□□ -1.81
LINC00557-201ENST00000563184 SUMF2Q8NBJ7 301 aa3.72□□□□□ -1.81
LINC00557-201ENST00000563184 OR51S1Q8NGJ8 323 aa3.72□□□□□ -1.81
LINC00557-201ENST00000563184 FBXO30Q8TB52 745 aa3.72□□□□□ -1.81
LINC00557-201ENST00000563184 RNF138Q8WVD3 245 aa3.72□□□□□ -1.81
LINC00557-201ENST00000563184 UBE2E3Q969T4 207 aa3.72□□□□□ -1.81
LINC00557-201ENST00000563184 SLC41A3Q96GZ6 507 aa3.72□□□□□ -1.81
LINC00557-201ENST00000563184 OXGR1Q96P68 337 aa3.72□□□□□ -1.81
LINC00557-201ENST00000563184 HIST1H4GQ99525 98 aa3.72□□□□□ -1.81
LINC00557-201ENST00000563184 RBKSQ9H477 322 aa3.72□□□□□ -1.81
LINC00557-201ENST00000563184 YY1AP1Q9H869 796 aa3.72□□□□□ -1.81
LINC00557-201ENST00000563184 HOXC10Q9NYD6 342 aa3.72□□□□□ -1.81
LINC00557-201ENST00000563184 COPS3Q9UNS2 423 aa3.72□□□□□ -1.81
LINC00557-201ENST00000563184 LTBP1Q14766 1721 aa3.71□□□□□ -1.82
LINC00557-201ENST00000563184 NBR2O15453 112 aa3.71□□□□□ -1.82
LINC00557-201ENST00000563184 SCGNO76038 276 aa3.71□□□□□ -1.82
LINC00557-201ENST00000563184 HSMCR30P0CW71 290 aa3.71□□□□□ -1.82
LINC00557-201ENST00000563184 COX7A1P24310 79 aa3.71□□□□□ -1.82
LINC00557-201ENST00000563184 RFC4P35249 363 aa3.71□□□□□ -1.82
LINC00557-201ENST00000563184 PRPHP41219 470 aa3.71□□□□□ -1.82
LINC00557-201ENST00000563184 KIR2DS4P43632 304 aa3.71□□□□□ -1.82
LINC00557-201ENST00000563184 CCT3P49368 545 aaKnown RBP3.71□□□□□ -1.82
LINC00557-201ENST00000563184 DUSP3P51452 185 aaPredicted RBP3.71□□□□□ -1.82
LINC00557-201ENST00000563184 CRYBB1P53674 252 aaPredicted RBP3.71□□□□□ -1.82
LINC00557-201ENST00000563184 PKNOX1P55347 436 aa3.71□□□□□ -1.82
LINC00557-201ENST00000563184 NSDHLQ15738 373 aa3.71□□□□□ -1.82
LINC00557-201ENST00000563184 DUSP7Q16829 419 aa3.71□□□□□ -1.82
LINC00557-201ENST00000563184 DMRTC1Q5HYR2 192 aa3.71□□□□□ -1.82
LINC00557-201ENST00000563184 OR52E8Q6IFG1 317 aa3.71□□□□□ -1.82
LINC00557-201ENST00000563184 ZNF530Q6P9A1 599 aaPredicted RBP3.71□□□□□ -1.82
LINC00557-201ENST00000563184 PGAP1Q75T13 922 aa3.71□□□□□ -1.82
LINC00557-201ENST00000563184 LINC01555Q8NAE3 123 aa3.71□□□□□ -1.82
LINC00557-201ENST00000563184 OR10G3Q8NGC4 313 aa3.71□□□□□ -1.82
LINC00557-201ENST00000563184 MAIP1Q8WWC4 291 aa3.71□□□□□ -1.82
LINC00557-201ENST00000563184 MYDGFQ969H8 173 aa3.71□□□□□ -1.82
LINC00557-201ENST00000563184 VCX2Q9H322 139 aa3.71□□□□□ -1.82
LINC00557-201ENST00000563184 NXF3Q9H4D5 531 aaKnown RBP3.71□□□□□ -1.82
LINC00557-201ENST00000563184 REEP4Q9H6H4 257 aa3.71□□□□□ -1.82
LINC00557-201ENST00000563184 C6orf203Q9P0P8 240 aaPredicted RBP3.71□□□□□ -1.82
LINC00557-201ENST00000563184 CDH9Q9ULB4 789 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms