RNA–Protein interactions for RNA: ENST00000563149.1

USB1-207, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-207ENST00000563149 SCP2D1Q9UJQ7 156 aa12.02□□□□□ -0.48
USB1-207ENST00000563149 IER3IP1Q9Y5U9 82 aa12.02□□□□□ -0.48
USB1-207ENST00000563149 NPTNQ9Y639 398 aa12.02□□□□□ -0.48
USB1-207ENST00000563149 AUP1Q9Y679 476 aa12.02□□□□□ -0.48
USB1-207ENST00000563149 GPR171O14626 319 aa12.02□□□□□ -0.49
USB1-207ENST00000563149 NDUFB5O43674 189 aa12.02□□□□□ -0.49
USB1-207ENST00000563149 OR10H2O60403 315 aa12.02□□□□□ -0.49
USB1-207ENST00000563149 TPPPO94811 219 aa12.02□□□□□ -0.49
USB1-207ENST00000563149 RASGRP1O95267 797 aa12.02□□□□□ -0.49
USB1-207ENST00000563149 CRYZL1O95825 349 aa12.02□□□□□ -0.49
USB1-207ENST00000563149 IGF2P01344 180 aa12.02□□□□□ -0.49
USB1-207ENST00000563149 SRMP19623 302 aa12.02□□□□□ -0.49
USB1-207ENST00000563149 S1PR1P21453 382 aa12.02□□□□□ -0.49
USB1-207ENST00000563149 HNRNPA2B1P22626 353 aaKnown RBP12.02□□□□□ -0.49
USB1-207ENST00000563149 AP2S1P53680 142 aaPredicted RBP12.02□□□□□ -0.49
USB1-207ENST00000563149 EPHA4P54764 986 aa12.02□□□□□ -0.49
USB1-207ENST00000563149 RPL6Q02878 288 aaKnown RBP12.02□□□□□ -0.49
USB1-207ENST00000563149 TCEA2Q15560 299 aa12.02□□□□□ -0.49
USB1-207ENST00000563149 ELFN2Q5R3F8 820 aa12.02□□□□□ -0.49
USB1-207ENST00000563149 SLC6A19Q695T7 634 aa12.02□□□□□ -0.49
USB1-207ENST00000563149 CCDC28AQ8IWP9 274 aa12.02□□□□□ -0.49
USB1-207ENST00000563149 TMEFF1Q8IYR6 380 aa12.02□□□□□ -0.49
USB1-207ENST00000563149 CSNK1A1LQ8N752 337 aa12.02□□□□□ -0.49
USB1-207ENST00000563149 ZNF680Q8NEM1 530 aa12.02□□□□□ -0.49
USB1-207ENST00000563149 OR4D9Q8NGE8 314 aa12.02□□□□□ -0.49
USB1-207ENST00000563149 OR5T3Q8NGG3 340 aa12.02□□□□□ -0.49
USB1-207ENST00000563149 C15orf40Q8WUR7 153 aa12.02□□□□□ -0.49
USB1-207ENST00000563149 GIMAP1Q8WWP7 306 aa12.02□□□□□ -0.49
USB1-207ENST00000563149 DDOQ99489 341 aa12.02□□□□□ -0.49
USB1-207ENST00000563149 KXD1Q9BQD3 176 aa12.02□□□□□ -0.49
USB1-207ENST00000563149 LMAN2LQ9H0V9 348 aa12.02□□□□□ -0.49
USB1-207ENST00000563149 NCDNQ9UBB6 729 aa12.02□□□□□ -0.49
USB1-207ENST00000563149 MRPS7Q9Y2R9 242 aaKnown RBP12.02□□□□□ -0.49
USB1-207ENST00000563149 AK6Q9Y3D8 172 aaKnown RBP12.02□□□□□ -0.49
USB1-207ENST00000563149 A0A087WUJ7 227 aa12.01□□□□□ -0.49
USB1-207ENST00000563149 A0A1W2PQ72 361 aa12.01□□□□□ -0.49
USB1-207ENST00000563149 BLACEA4D250 179 aa12.01□□□□□ -0.49
USB1-207ENST00000563149 SYNDIG1LA6NDD5 238 aa12.01□□□□□ -0.49
USB1-207ENST00000563149 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.01□□□□□ -0.49
USB1-207ENST00000563149 NPIPB9F8W1W9 429 aa12.01□□□□□ -0.49
USB1-207ENST00000563149 GABARAPH6UMI1 98 aa12.01□□□□□ -0.49
USB1-207ENST00000563149 ZNF593O00488 134 aaPredicted RBP12.01□□□□□ -0.49
USB1-207ENST00000563149 SHOXO15266 292 aa12.01□□□□□ -0.49
USB1-207ENST00000563149 PEX14O75381 377 aa12.01□□□□□ -0.49
USB1-207ENST00000563149 TGM6O95932 706 aa12.01□□□□□ -0.49
USB1-207ENST00000563149 HOXB2P14652 356 aa12.01□□□□□ -0.49
USB1-207ENST00000563149 MYOGP15173 224 aa12.01□□□□□ -0.49
USB1-207ENST00000563149 GDNFP39905 211 aa12.01□□□□□ -0.49
USB1-207ENST00000563149 CCR9P51686 369 aa12.01□□□□□ -0.49
USB1-207ENST00000563149 PRPS1P60891 318 aa12.01□□□□□ -0.49
USB1-207ENST00000563149 SRP54P61011 504 aaKnown RBP12.01□□□□□ -0.49
USB1-207ENST00000563149 CAMK2DQ13557 499 aa12.01□□□□□ -0.49
USB1-207ENST00000563149 ST3GAL2Q16842 350 aa12.01□□□□□ -0.49
USB1-207ENST00000563149 KCTD20Q7Z5Y7 419 aa12.01□□□□□ -0.49
USB1-207ENST00000563149 SLC35F3Q8IY50 421 aa12.01□□□□□ -0.49
USB1-207ENST00000563149 ZNF440Q8IYI8 595 aa12.01□□□□□ -0.49
USB1-207ENST00000563149 ELMOD2Q8IZ81 293 aa12.01□□□□□ -0.49
USB1-207ENST00000563149 CMTM4Q8IZR5 234 aa12.01□□□□□ -0.49
USB1-207ENST00000563149 NPEPL1Q8NDH3 523 aa12.01□□□□□ -0.49
USB1-207ENST00000563149 FAM71CQ8NEG0 241 aa12.01□□□□□ -0.49
USB1-207ENST00000563149 OR51Q1Q8NH59 317 aa12.01□□□□□ -0.49
USB1-207ENST00000563149 LGALS14Q8TCE9 139 aa12.01□□□□□ -0.49
USB1-207ENST00000563149 SMAP2Q8WU79 429 aaPredicted RBP12.01□□□□□ -0.49
USB1-207ENST00000563149 NXPE2Q96DL1 559 aa12.01□□□□□ -0.49
USB1-207ENST00000563149 SIPA1Q96FS4 1042 aa12.01□□□□□ -0.49
USB1-207ENST00000563149 CDCA3Q99618 268 aaPredicted RBP12.01□□□□□ -0.49
USB1-207ENST00000563149 G6PC3Q9BUM1 346 aa12.01□□□□□ -0.49
USB1-207ENST00000563149 NMNAT2Q9BZQ4 307 aa12.01□□□□□ -0.49
USB1-207ENST00000563149 SLC19A3Q9BZV2 496 aa12.01□□□□□ -0.49
USB1-207ENST00000563149 SLC6A17Q9H1V8 727 aa12.01□□□□□ -0.49
USB1-207ENST00000563149 NANSQ9NR45 359 aa12.01□□□□□ -0.49
USB1-207ENST00000563149 DLL4Q9NR61 685 aa12.01□□□□□ -0.49
USB1-207ENST00000563149 GNG8Q9UK08 70 aa12.01□□□□□ -0.49
USB1-207ENST00000563149 ZNF281Q9Y2X9 895 aa12.01□□□□□ -0.49
USB1-207ENST00000563149 ZNF337Q9Y3M9 751 aa12.01□□□□□ -0.49
USB1-207ENST00000563149 A0A1W2PQF6 199 aa12□□□□□ -0.49
USB1-207ENST00000563149 MCIDASD6RGH6 385 aa12□□□□□ -0.49
USB1-207ENST00000563149 AIPO00170 330 aa12□□□□□ -0.49
USB1-207ENST00000563149 KHNYNO15037 678 aaKnown RBP12□□□□□ -0.49
USB1-207ENST00000563149 ADAM11O75078 769 aa12□□□□□ -0.49
USB1-207ENST00000563149 TSC22D2O75157 780 aa12□□□□□ -0.49
USB1-207ENST00000563149 GLCEO94923 617 aa12□□□□□ -0.49
USB1-207ENST00000563149 WNT1P04628 370 aa12□□□□□ -0.49
USB1-207ENST00000563149 RAB40ALP0C0E4 278 aa12□□□□□ -0.49
USB1-207ENST00000563149 CALCBP10092 127 aa12□□□□□ -0.49
USB1-207ENST00000563149 SPI1P17947 270 aa12□□□□□ -0.49
USB1-207ENST00000563149 M6PRP20645 277 aa12□□□□□ -0.49
USB1-207ENST00000563149 DNASE1P24855 282 aa12□□□□□ -0.49
USB1-207ENST00000563149 MNDAP41218 407 aa12□□□□□ -0.49
USB1-207ENST00000563149 LSSP48449 732 aa12□□□□□ -0.49
USB1-207ENST00000563149 CCR6P51684 374 aa12□□□□□ -0.49
USB1-207ENST00000563149 HCCSP53701 268 aa12□□□□□ -0.49
USB1-207ENST00000563149 KIRREL2Q6UWL6 708 aa12□□□□□ -0.49
USB1-207ENST00000563149 ZNF687Q8N1G0 1237 aa12□□□□□ -0.49
USB1-207ENST00000563149 ARL14Q8N4G2 192 aa12□□□□□ -0.49
USB1-207ENST00000563149 RFLNBQ8N5W9 214 aa12□□□□□ -0.49
USB1-207ENST00000563149 RAB40AQ8WXH6 277 aa12□□□□□ -0.49
USB1-207ENST00000563149 RBM18Q96H35 190 aaKnown RBP12□□□□□ -0.49
USB1-207ENST00000563149 OR14A2Q96R54 314 aa12□□□□□ -0.49
USB1-207ENST00000563149 GPX7Q96SL4 187 aaPredicted RBP12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms