RNA–Protein interactions for RNA: ENST00000562806.1

CHD9-207, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 400 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-207ENST00000562806 EIF4EBP1Q13541 118 aaPredicted RBP1.77□□□□□ -2.13
CHD9-207ENST00000562806 ATP6AP1Q15904 470 aa1.77□□□□□ -2.13
CHD9-207ENST00000562806 UBE2SQ16763 222 aa1.77□□□□□ -2.13
CHD9-207ENST00000562806 NSUN5P1Q3KNT7 163 aa1.77□□□□□ -2.13
CHD9-207ENST00000562806 PIGGQ5H8A4 983 aa1.77□□□□□ -2.13
CHD9-207ENST00000562806 FAM71E1Q6IPT2 247 aa1.77□□□□□ -2.13
CHD9-207ENST00000562806 ACP7Q6ZNF0 438 aa1.77□□□□□ -2.13
CHD9-207ENST00000562806 KRTAP5-5Q701N2 237 aaPredicted RBP1.77□□□□□ -2.13
CHD9-207ENST00000562806 H2AFVQ71UI9 128 aa1.77□□□□□ -2.13
CHD9-207ENST00000562806 ZNF571Q7Z3V5 609 aaPredicted RBP1.77□□□□□ -2.13
CHD9-207ENST00000562806 ZNF573Q86YE8 665 aa1.77□□□□□ -2.13
CHD9-207ENST00000562806 RDH10Q8IZV5 341 aa1.77□□□□□ -2.13
CHD9-207ENST00000562806 ATP6V0D2Q8N8Y2 350 aa1.77□□□□□ -2.13
CHD9-207ENST00000562806 TSG101Q99816 390 aa1.77□□□□□ -2.13
CHD9-207ENST00000562806 ECSITQ9BQ95 431 aa1.77□□□□□ -2.13
CHD9-207ENST00000562806 ALG12Q9BV10 488 aa1.77□□□□□ -2.13
CHD9-207ENST00000562806 IFI27L2Q9H2X8 130 aa1.77□□□□□ -2.13
CHD9-207ENST00000562806 SDAD1Q9NVU7 687 aaKnown RBP eCLIP1.77□□□□□ -2.13
CHD9-207ENST00000562806 NECAP2Q9NVZ3 263 aa1.77□□□□□ -2.13
CHD9-207ENST00000562806 TRAF3IP3Q9Y228 551 aa1.77□□□□□ -2.13
CHD9-207ENST00000562806 AK6Q9Y3D8 172 aaKnown RBP1.77□□□□□ -2.13
CHD9-207ENST00000562806 A6NIZ1 184 aa1.76□□□□□ -2.13
CHD9-207ENST00000562806 IDSB3KWA1 339 aa1.76□□□□□ -2.13
CHD9-207ENST00000562806 F5H6K3 240 aa1.76□□□□□ -2.13
CHD9-207ENST00000562806 DCTN6O00399 190 aa1.76□□□□□ -2.13
CHD9-207ENST00000562806 BET1O15155 118 aa1.76□□□□□ -2.13
CHD9-207ENST00000562806 TAPBPO15533 448 aa1.76□□□□□ -2.13
CHD9-207ENST00000562806 OR1F1O43749 312 aa1.76□□□□□ -2.13
CHD9-207ENST00000562806 BCAS1O75363 584 aaPredicted RBP1.76□□□□□ -2.13
CHD9-207ENST00000562806 KRT8P05787 483 aa1.76□□□□□ -2.13
CHD9-207ENST00000562806 HSMCR30P0CW71 290 aa1.76□□□□□ -2.13
CHD9-207ENST00000562806 ATP6V1B2P21281 511 aa1.76□□□□□ -2.13
CHD9-207ENST00000562806 IL12AP29459 219 aa1.76□□□□□ -2.13
CHD9-207ENST00000562806 ADSSP30520 456 aa1.76□□□□□ -2.13
CHD9-207ENST00000562806 HOXA9P31269 272 aa1.76□□□□□ -2.13
CHD9-207ENST00000562806 MDH1P40925 334 aaKnown RBP1.76□□□□□ -2.13
CHD9-207ENST00000562806 PKNOX1P55347 436 aa1.76□□□□□ -2.13
CHD9-207ENST00000562806 RAP1BP61224 184 aa1.76□□□□□ -2.13
CHD9-207ENST00000562806 KLRC3Q07444 240 aa1.76□□□□□ -2.13
CHD9-207ENST00000562806 ZNF763Q0D2J5 394 aa1.76□□□□□ -2.13
CHD9-207ENST00000562806 PJVKQ0ZLH3 352 aa1.76□□□□□ -2.13
CHD9-207ENST00000562806 GANABQ14697 944 aaKnown RBP1.76□□□□□ -2.13
CHD9-207ENST00000562806 SLC25A52Q3SY17 297 aa1.76□□□□□ -2.13
CHD9-207ENST00000562806 RIPPLY2Q5TAB7 128 aa1.76□□□□□ -2.13
CHD9-207ENST00000562806 LRRC31Q6UY01 552 aa1.76□□□□□ -2.13
CHD9-207ENST00000562806 HSDL2Q6YN16 418 aa1.76□□□□□ -2.13
CHD9-207ENST00000562806 KIAA1328Q86T90 577 aa1.76□□□□□ -2.13
CHD9-207ENST00000562806 LRRC43Q8N309 656 aa1.76□□□□□ -2.13
CHD9-207ENST00000562806 CCDC54Q8NEL0 328 aa1.76□□□□□ -2.13
CHD9-207ENST00000562806 NPBQ8NG41 125 aa1.76□□□□□ -2.13
CHD9-207ENST00000562806 FAM3CQ92520 227 aa1.76□□□□□ -2.13
CHD9-207ENST00000562806 NDRG1Q92597 394 aaKnown RBP1.76□□□□□ -2.13
CHD9-207ENST00000562806 RNF185Q96GF1 192 aa1.76□□□□□ -2.13
CHD9-207ENST00000562806 TSNARE1Q96NA8 513 aa1.76□□□□□ -2.13
CHD9-207ENST00000562806 C20orf85Q9H1P6 137 aa1.76□□□□□ -2.13
CHD9-207ENST00000562806 VCPKMTQ9H867 229 aa1.76□□□□□ -2.13
CHD9-207ENST00000562806 TM9SF3Q9HD45 589 aa1.76□□□□□ -2.13
CHD9-207ENST00000562806 LHX9Q9NQ69 397 aa1.76□□□□□ -2.13
CHD9-207ENST00000562806 TBX21Q9UL17 535 aa1.76□□□□□ -2.13
CHD9-207ENST00000562806 AURKCQ9UQB9 309 aa1.76□□□□□ -2.13
CHD9-207ENST00000562806 PRG3Q9Y2Y8 225 aaPredicted RBP1.76□□□□□ -2.13
CHD9-207ENST00000562806 RPL36Q9Y3U8 105 aaKnown RBP1.76□□□□□ -2.13
CHD9-207ENST00000562806 DDX49Q9Y6V7 483 aaKnown RBP1.76□□□□□ -2.13
CHD9-207ENST00000562806 CARMIL3Q8ND23 1372 aa1.75□□□□□ -2.13
CHD9-207ENST00000562806 ATP8B3O60423 1300 aa1.75□□□□□ -2.13
CHD9-207ENST00000562806 A0A096LNJ9 63 aa1.75□□□□□ -2.13
CHD9-207ENST00000562806 A0A1B0GUS0 222 aa1.75□□□□□ -2.13
CHD9-207ENST00000562806 A0A1B0GWJ7 208 aa1.75□□□□□ -2.13
CHD9-207ENST00000562806 LRCOL1A6NCL2 159 aa1.75□□□□□ -2.13
CHD9-207ENST00000562806 ANKRD63C9JTQ0 380 aa1.75□□□□□ -2.13
CHD9-207ENST00000562806 LOC110117498-PIK3R3F6TDL0 507 aa1.75□□□□□ -2.13
CHD9-207ENST00000562806 BTN3A3O00478 584 aa1.75□□□□□ -2.13
CHD9-207ENST00000562806 SLC31A2O15432 143 aa1.75□□□□□ -2.13
CHD9-207ENST00000562806 RBMY1CP0DJD4 496 aa1.75□□□□□ -2.13
CHD9-207ENST00000562806 CCDC130P13994 396 aa1.75□□□□□ -2.13
CHD9-207ENST00000562806 ABOP16442 354 aa1.75□□□□□ -2.13
CHD9-207ENST00000562806 POLR2EP19388 210 aaKnown RBP1.75□□□□□ -2.13
CHD9-207ENST00000562806 FMO3P31513 532 aa1.75□□□□□ -2.13
CHD9-207ENST00000562806 CHI3L1P36222 383 aaPredicted RBP1.75□□□□□ -2.13
CHD9-207ENST00000562806 MAP3K8P41279 467 aa1.75□□□□□ -2.13
CHD9-207ENST00000562806 NMUP48645 174 aa1.75□□□□□ -2.13
CHD9-207ENST00000562806 HSPA2P54652 639 aa1.75□□□□□ -2.13
CHD9-207ENST00000562806 SNTB2Q13425 540 aaKnown RBP1.75□□□□□ -2.13
CHD9-207ENST00000562806 DPYSL2Q16555 572 aa1.75□□□□□ -2.13
CHD9-207ENST00000562806 LRRC10Q5BKY1 277 aa1.75□□□□□ -2.13
CHD9-207ENST00000562806 MARCH8Q5T0T0 291 aa1.75□□□□□ -2.13
CHD9-207ENST00000562806 NCR3LG1Q68D85 454 aa1.75□□□□□ -2.13
CHD9-207ENST00000562806 FRMPD2BQ6IN97 320 aa1.75□□□□□ -2.13
CHD9-207ENST00000562806 RFLNAQ6ZTI6 216 aa1.75□□□□□ -2.13
CHD9-207ENST00000562806 PRSS41Q7RTY9 318 aa1.75□□□□□ -2.13
CHD9-207ENST00000562806 LYPD1Q8N2G4 141 aa1.75□□□□□ -2.13
CHD9-207ENST00000562806 ZNF540Q8NDQ6 660 aa1.75□□□□□ -2.13
CHD9-207ENST00000562806 OR4D9Q8NGE8 314 aa1.75□□□□□ -2.13
CHD9-207ENST00000562806 OR5L2Q8NGL0 311 aa1.75□□□□□ -2.13
CHD9-207ENST00000562806 OR1N2Q8NGR9 330 aa1.75□□□□□ -2.13
CHD9-207ENST00000562806 OR2L8Q8NGY9 312 aa1.75□□□□□ -2.13
CHD9-207ENST00000562806 MAIP1Q8WWC4 291 aa1.75□□□□□ -2.13
CHD9-207ENST00000562806 RPUSD4Q96CM3 377 aaKnown RBP1.75□□□□□ -2.13
CHD9-207ENST00000562806 FCRL1Q96LA6 429 aa1.75□□□□□ -2.13
CHD9-207ENST00000562806 TPPP3Q9BW30 176 aa1.75□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms