RNA–Protein interactions for RNA: ENST00000562118.1

CDH1-204, Transcript of cadherin 1, humanhuman

TSL 2

Gene CDH1, Length 952 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-204ENST00000562118 RNF148Q8N7C7 305 aa11.99□□□□□ -0.49
CDH1-204ENST00000562118 GEMIN6Q8WXD5 167 aaKnown RBP11.99□□□□□ -0.49
CDH1-204ENST00000562118 LZICQ8WZA0 190 aa11.99□□□□□ -0.49
CDH1-204ENST00000562118 GMPPAQ96IJ6 420 aaPredicted RBP11.99□□□□□ -0.49
CDH1-204ENST00000562118 MPP4Q96JB8 637 aa11.99□□□□□ -0.49
CDH1-204ENST00000562118 C7orf34Q96L11 122 aa11.99□□□□□ -0.49
CDH1-204ENST00000562118 OR5B2Q96R09 309 aa11.99□□□□□ -0.49
CDH1-204ENST00000562118 AMBRA1Q9C0C7 1298 aa11.99□□□□□ -0.49
CDH1-204ENST00000562118 TMEM27Q9HBJ8 222 aa11.99□□□□□ -0.49
CDH1-204ENST00000562118 ADPRHL2Q9NX46 363 aa11.99□□□□□ -0.49
CDH1-204ENST00000562118 ALKBH4Q9NXW9 302 aa11.99□□□□□ -0.49
CDH1-204ENST00000562118 COQ3Q9NZJ6 369 aa11.99□□□□□ -0.49
CDH1-204ENST00000562118 ACTR3BQ9P1U1 418 aa11.99□□□□□ -0.49
CDH1-204ENST00000562118 RPS6KA6Q9UK32 745 aa11.99□□□□□ -0.49
CDH1-204ENST00000562118 A4GNTQ9UNA3 340 aa11.99□□□□□ -0.49
CDH1-204ENST00000562118 SAMD4AQ9UPU9 718 aaKnown RBP11.99□□□□□ -0.49
CDH1-204ENST00000562118 SH3GLB1Q9Y371 365 aa11.99□□□□□ -0.49
CDH1-204ENST00000562118 CELSR2Q9HCU4 2923 aa11.99□□□□□ -0.49
CDH1-204ENST00000562118 ZNF716A6NP11 495 aa11.98□□□□□ -0.49
CDH1-204ENST00000562118 ACOT8O14734 319 aa11.98□□□□□ -0.49
CDH1-204ENST00000562118 TMIGD3P0DMS9 266 aaPredicted RBP11.98□□□□□ -0.49
CDH1-204ENST00000562118 TNFRSF1BP20333 461 aa11.98□□□□□ -0.49
CDH1-204ENST00000562118 OPRM1P35372 400 aa11.98□□□□□ -0.49
CDH1-204ENST00000562118 NCALDP61601 193 aa11.98□□□□□ -0.49
CDH1-204ENST00000562118 MXRA7P84157 204 aa11.98□□□□□ -0.49
CDH1-204ENST00000562118 TRIM25Q14258 630 aaKnown RBP11.98□□□□□ -0.49
CDH1-204ENST00000562118 RNPS1Q15287 305 aaKnown RBP11.98□□□□□ -0.49
CDH1-204ENST00000562118 DNAL1Q4LDG9 190 aa11.98□□□□□ -0.49
CDH1-204ENST00000562118 MTX3Q5HYI7 312 aa11.98□□□□□ -0.49
CDH1-204ENST00000562118 C1orf140Q5VVS0 124 aa11.98□□□□□ -0.49
CDH1-204ENST00000562118 PAQR6Q6TCH4 344 aa11.98□□□□□ -0.49
CDH1-204ENST00000562118 CHMP1BQ7LBR1 199 aa11.98□□□□□ -0.49
CDH1-204ENST00000562118 LSRQ86X29 649 aaPredicted RBP11.98□□□□□ -0.49
CDH1-204ENST00000562118 FAM86B1Q8N7N1 296 aa11.98□□□□□ -0.49
CDH1-204ENST00000562118 MFSD8Q8NHS3 518 aa11.98□□□□□ -0.49
CDH1-204ENST00000562118 SDCCAG3Q96C92 435 aa11.98□□□□□ -0.49
CDH1-204ENST00000562118 STARD4Q96DR4 205 aa11.98□□□□□ -0.49
CDH1-204ENST00000562118 ASB9Q96DX5 294 aa11.98□□□□□ -0.49
CDH1-204ENST00000562118 HSH2DQ96JZ2 352 aa11.98□□□□□ -0.49
CDH1-204ENST00000562118 DHRS1Q96LJ7 313 aa11.98□□□□□ -0.49
CDH1-204ENST00000562118 PRRC1Q96M27 445 aa11.98□□□□□ -0.49
CDH1-204ENST00000562118 PSD2Q9BQI7 771 aa11.98□□□□□ -0.49
CDH1-204ENST00000562118 SLC19A3Q9BZV2 496 aa11.98□□□□□ -0.49
CDH1-204ENST00000562118 MAN2C1Q9NTJ4 1040 aa11.98□□□□□ -0.49
CDH1-204ENST00000562118 UNC79Q9P2D8 2635 aa11.97□□□□□ -0.49
CDH1-204ENST00000562118 TCRBV5S2A0A599 114 aa11.97□□□□□ -0.49
CDH1-204ENST00000562118 ZNF724A8MTY0 619 aa11.97□□□□□ -0.49
CDH1-204ENST00000562118 ZNF814B7Z6K7 855 aa11.97□□□□□ -0.49
CDH1-204ENST00000562118 SULT2B1O00204 365 aa11.97□□□□□ -0.49
CDH1-204ENST00000562118 FFAR1O14842 300 aa11.97□□□□□ -0.49
CDH1-204ENST00000562118 GSTA4O15217 222 aa11.97□□□□□ -0.49
CDH1-204ENST00000562118 EIF1BO60739 113 aaKnown RBP11.97□□□□□ -0.49
CDH1-204ENST00000562118 CD8BP10966 210 aa11.97□□□□□ -0.49
CDH1-204ENST00000562118 KLK2P20151 261 aa11.97□□□□□ -0.49
CDH1-204ENST00000562118 ENPP1P22413 925 aa11.97□□□□□ -0.49
CDH1-204ENST00000562118 IDUAP35475 653 aa11.97□□□□□ -0.49
CDH1-204ENST00000562118 RBM34P42696 430 aaKnown RBP11.97□□□□□ -0.49
CDH1-204ENST00000562118 OR1E2P47887 323 aa11.97□□□□□ -0.49
CDH1-204ENST00000562118 SLC35A1P78382 337 aa11.97□□□□□ -0.49
CDH1-204ENST00000562118 MS4A2Q01362 244 aa11.97□□□□□ -0.49
CDH1-204ENST00000562118 SGCBQ16585 318 aa11.97□□□□□ -0.49
CDH1-204ENST00000562118 IFI44LQ53G44 452 aa11.97□□□□□ -0.49
CDH1-204ENST00000562118 FCRLAQ7L513 359 aa11.97□□□□□ -0.49
CDH1-204ENST00000562118 FAM214BQ7L5A3 538 aa11.97□□□□□ -0.49
CDH1-204ENST00000562118 MAMDC2Q7Z304 686 aaPredicted RBP11.97□□□□□ -0.49
CDH1-204ENST00000562118 GDF7Q7Z4P5 450 aa11.97□□□□□ -0.49
CDH1-204ENST00000562118 OFCC1Q8IZS5 231 aa11.97□□□□□ -0.49
CDH1-204ENST00000562118 ADPRHL1Q8NDY3 354 aa11.97□□□□□ -0.49
CDH1-204ENST00000562118 OR10Q1Q8NGQ4 319 aa11.97□□□□□ -0.49
CDH1-204ENST00000562118 VANGL1Q8TAA9 524 aaPredicted RBP11.97□□□□□ -0.49
CDH1-204ENST00000562118 FAM162AQ96A26 154 aa11.97□□□□□ -0.49
CDH1-204ENST00000562118 KTI12Q96EK9 354 aaPredicted RBP11.97□□□□□ -0.49
CDH1-204ENST00000562118 SLC41A3Q96GZ6 507 aa11.97□□□□□ -0.49
CDH1-204ENST00000562118 BTBD10Q9BSF8 475 aa11.97□□□□□ -0.49
CDH1-204ENST00000562118 TACO1Q9BSH4 297 aaKnown RBP11.97□□□□□ -0.49
CDH1-204ENST00000562118 PIGMQ9H3S5 423 aa11.97□□□□□ -0.49
CDH1-204ENST00000562118 FANCFQ9NPI8 374 aa11.97□□□□□ -0.49
CDH1-204ENST00000562118 KLHL13Q9P2N7 655 aa11.97□□□□□ -0.49
CDH1-204ENST00000562118 RPS6KB2Q9UBS0 482 aa11.97□□□□□ -0.49
CDH1-204ENST00000562118 FREM1Q5H8C1 2179 aa11.96□□□□□ -0.49
CDH1-204ENST00000562118 CENPEQ02224 2701 aa11.96□□□□□ -0.49
CDH1-204ENST00000562118 ANKHD1Q8IWZ3 2542 aaKnown RBP11.96□□□□□ -0.49
CDH1-204ENST00000562118 TRAV36DV7A0A075B6V5 113 aa11.96□□□□□ -0.49
CDH1-204ENST00000562118 AQP7P3A6NL99 342 aa11.96□□□□□ -0.49
CDH1-204ENST00000562118 ELOA3DA6NLF2 546 aaPredicted RBP11.96□□□□□ -0.49
CDH1-204ENST00000562118 CPSF4LA6NMK7 179 aaKnown RBP11.96□□□□□ -0.49
CDH1-204ENST00000562118 DVL2O14641 736 aa11.96□□□□□ -0.49
CDH1-204ENST00000562118 ATP5HO75947 161 aa11.96□□□□□ -0.49
CDH1-204ENST00000562118 SYNGR4O95473 234 aa11.96□□□□□ -0.49
CDH1-204ENST00000562118 BGLAPP02818 100 aa11.96□□□□□ -0.49
CDH1-204ENST00000562118 IFNW1P05000 195 aa11.96□□□□□ -0.49
CDH1-204ENST00000562118 GPIP06744 558 aa11.96□□□□□ -0.49
CDH1-204ENST00000562118 TSPAN19P0C672 248 aa11.96□□□□□ -0.49
CDH1-204ENST00000562118 TCN1P20061 433 aaPredicted RBP11.96□□□□□ -0.49
CDH1-204ENST00000562118 ATP6V1B2P21281 511 aa11.96□□□□□ -0.49
CDH1-204ENST00000562118 AGTR1P30556 359 aa11.96□□□□□ -0.49
CDH1-204ENST00000562118 MAGEA2P43356 314 aa11.96□□□□□ -0.49
CDH1-204ENST00000562118 TRAP1Q12931 704 aaKnown RBP11.96□□□□□ -0.49
CDH1-204ENST00000562118 POU4F3Q15319 338 aa11.96□□□□□ -0.49
CDH1-204ENST00000562118 ELOA3BQ3SY89 546 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms