RNA–Protein interactions for RNA: ENST00000561960.5

NSMCE1-202, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-202ENST00000561960 LILRA1O75019 489 aa10.14□□□□□ -0.79
NSMCE1-202ENST00000561960 KRT16P08779 473 aa10.14□□□□□ -0.79
NSMCE1-202ENST00000561960 CECR9P0C854 216 aa10.14□□□□□ -0.79
NSMCE1-202ENST00000561960 G6PDP11413 515 aa10.14□□□□□ -0.79
NSMCE1-202ENST00000561960 EGR1P18146 543 aa10.14□□□□□ -0.79
NSMCE1-202ENST00000561960 KRT4P19013 534 aa10.14□□□□□ -0.79
NSMCE1-202ENST00000561960 ALDH3A1P30838 453 aa10.14□□□□□ -0.79
NSMCE1-202ENST00000561960 THBS2P35442 1172 aa10.14□□□□□ -0.79
NSMCE1-202ENST00000561960 THBS4P35443 961 aa10.14□□□□□ -0.79
NSMCE1-202ENST00000561960 APOBEC1P41238 236 aaKnown RBP10.14□□□□□ -0.79
NSMCE1-202ENST00000561960 SELENOPP49908 381 aa10.14□□□□□ -0.79
NSMCE1-202ENST00000561960 NPRL3Q12980 569 aa10.14□□□□□ -0.79
NSMCE1-202ENST00000561960 CEACAM7Q14002 265 aa10.14□□□□□ -0.79
NSMCE1-202ENST00000561960 ARHGAP11BQ3KRB8 267 aa10.14□□□□□ -0.79
NSMCE1-202ENST00000561960 LSM12Q3MHD2 195 aaKnown RBP10.14□□□□□ -0.79
NSMCE1-202ENST00000561960 TBRG1Q3YBR2 411 aa10.14□□□□□ -0.79
NSMCE1-202ENST00000561960 CCDC153Q494R4 210 aa10.14□□□□□ -0.79
NSMCE1-202ENST00000561960 GPAT3Q53EU6 434 aa10.14□□□□□ -0.79
NSMCE1-202ENST00000561960 DEF8Q6ZN54 512 aa10.14□□□□□ -0.79
NSMCE1-202ENST00000561960 AAED1Q7RTV5 226 aa10.14□□□□□ -0.79
NSMCE1-202ENST00000561960 SPATA21Q7Z572 469 aa10.14□□□□□ -0.79
NSMCE1-202ENST00000561960 LCA5Q86VQ0 697 aa10.14□□□□□ -0.79
NSMCE1-202ENST00000561960 KDM8Q8N371 416 aa10.14□□□□□ -0.79
NSMCE1-202ENST00000561960 ARFGAP2Q8N6H7 521 aa10.14□□□□□ -0.79
NSMCE1-202ENST00000561960 ZIC4Q8N9L1 334 aa10.14□□□□□ -0.79
NSMCE1-202ENST00000561960 SLC25A43Q8WUT9 341 aaPredicted RBP10.14□□□□□ -0.79
NSMCE1-202ENST00000561960 ZBTB9Q96C00 473 aa10.14□□□□□ -0.79
NSMCE1-202ENST00000561960 MTERF3Q96E29 417 aa10.14□□□□□ -0.79
NSMCE1-202ENST00000561960 ZNF350Q9GZX5 532 aa10.14□□□□□ -0.79
NSMCE1-202ENST00000561960 ADPRHL2Q9NX46 363 aa10.14□□□□□ -0.79
NSMCE1-202ENST00000561960 TMEM181Q9P2C4 612 aa10.14□□□□□ -0.79
NSMCE1-202ENST00000561960 SLC17A7Q9P2U7 560 aa10.14□□□□□ -0.79
NSMCE1-202ENST00000561960 DCTN4Q9UJW0 460 aa10.14□□□□□ -0.79
NSMCE1-202ENST00000561960 WDR45Q9Y484 360 aa10.14□□□□□ -0.79
NSMCE1-202ENST00000561960 ZNF503-AS2A6NEH8 195 aa10.13□□□□□ -0.79
NSMCE1-202ENST00000561960 TMEM114B3SHH9 223 aa10.13□□□□□ -0.79
NSMCE1-202ENST00000561960 NDUFS8O00217 210 aa10.13□□□□□ -0.79
NSMCE1-202ENST00000561960 SPAG7O75391 227 aa10.13□□□□□ -0.79
NSMCE1-202ENST00000561960 WNT11O96014 354 aa10.13□□□□□ -0.79
NSMCE1-202ENST00000561960 IGFBP1P08833 259 aaPredicted RBP10.13□□□□□ -0.79
NSMCE1-202ENST00000561960 ADRA2AP08913 450 aa10.13□□□□□ -0.79
NSMCE1-202ENST00000561960 GKN3PP0CG01 181 aa10.13□□□□□ -0.79
NSMCE1-202ENST00000561960 IFNGR1P15260 489 aa10.13□□□□□ -0.79
NSMCE1-202ENST00000561960 TACR3P29371 465 aa10.13□□□□□ -0.79
NSMCE1-202ENST00000561960 MPGP29372 298 aa10.13□□□□□ -0.79
NSMCE1-202ENST00000561960 CHN2P52757 468 aa10.13□□□□□ -0.79
NSMCE1-202ENST00000561960 SLC16A1P53985 500 aa10.13□□□□□ -0.79
NSMCE1-202ENST00000561960 NME5P56597 212 aa10.13□□□□□ -0.79
NSMCE1-202ENST00000561960 IL1RL1Q01638 556 aa10.13□□□□□ -0.79
NSMCE1-202ENST00000561960 NAAAQ02083 359 aa10.13□□□□□ -0.79
NSMCE1-202ENST00000561960 HGFACQ04756 655 aa10.13□□□□□ -0.79
NSMCE1-202ENST00000561960 SLC17A1Q14916 467 aa10.13□□□□□ -0.79
NSMCE1-202ENST00000561960 PDK3Q15120 406 aa10.13□□□□□ -0.79
NSMCE1-202ENST00000561960 ADRM1Q16186 407 aa10.13□□□□□ -0.79
NSMCE1-202ENST00000561960 WHAMMP3Q1A5X7 153 aa10.13□□□□□ -0.79
NSMCE1-202ENST00000561960 C6orf136Q5SQH8 315 aa10.13□□□□□ -0.79
NSMCE1-202ENST00000561960 KRT80Q6KB66 452 aa10.13□□□□□ -0.79
NSMCE1-202ENST00000561960 FRRS1Q6ZNA5 592 aa10.13□□□□□ -0.79
NSMCE1-202ENST00000561960 TRMT10CQ7L0Y3 403 aaKnown RBP10.13□□□□□ -0.79
NSMCE1-202ENST00000561960 GRINAQ7Z429 371 aa10.13□□□□□ -0.79
NSMCE1-202ENST00000561960 RFLNBQ8N5W9 214 aa10.13□□□□□ -0.79
NSMCE1-202ENST00000561960 LINC01356Q8N9X3 169 aa10.13□□□□□ -0.79
NSMCE1-202ENST00000561960 FAM71CQ8NEG0 241 aa10.13□□□□□ -0.79
NSMCE1-202ENST00000561960 OR9K2Q8NGE7 335 aa10.13□□□□□ -0.79
NSMCE1-202ENST00000561960 OR1K1Q8NGR3 316 aa10.13□□□□□ -0.79
NSMCE1-202ENST00000561960 PSMA8Q8TAA3 256 aa10.13□□□□□ -0.79
NSMCE1-202ENST00000561960 PNPT1Q8TCS8 783 aaKnown RBP10.13□□□□□ -0.79
NSMCE1-202ENST00000561960 TSPYL1Q9H0U9 437 aa10.13□□□□□ -0.79
NSMCE1-202ENST00000561960 DYNLRB1Q9NP97 96 aa10.13□□□□□ -0.79
NSMCE1-202ENST00000561960 SEC14L4Q9UDX3 406 aa10.13□□□□□ -0.79
NSMCE1-202ENST00000561960 OSGIN1Q9UJX0 560 aa10.13□□□□□ -0.79
NSMCE1-202ENST00000561960 FZR1Q9UM11 496 aa10.13□□□□□ -0.79
NSMCE1-202ENST00000561960 SLC9A8Q9Y2E8 581 aa10.13□□□□□ -0.79
NSMCE1-202ENST00000561960 TMED5Q9Y3A6 229 aa10.13□□□□□ -0.79
NSMCE1-202ENST00000561960 HDGFL3Q9Y3E1 203 aa10.13□□□□□ -0.79
NSMCE1-202ENST00000561960 SPIN1Q9Y657 262 aaPredicted RBP10.13□□□□□ -0.79
NSMCE1-202ENST00000561960 OR6C65A6NJZ3 312 aa10.12□□□□□ -0.79
NSMCE1-202ENST00000561960 FAM157AC9JC47 383 aa10.12□□□□□ -0.79
NSMCE1-202ENST00000561960 DNAJA2O60884 412 aa10.12□□□□□ -0.79
NSMCE1-202ENST00000561960 LYPLA1O75608 230 aaPredicted RBP10.12□□□□□ -0.79
NSMCE1-202ENST00000561960 UPK3AO75631 287 aa10.12□□□□□ -0.79
NSMCE1-202ENST00000561960 CRHR1P34998 444 aa10.12□□□□□ -0.79
NSMCE1-202ENST00000561960 SLC1A3P43003 542 aa10.12□□□□□ -0.79
NSMCE1-202ENST00000561960 IDH3GP51553 393 aaPredicted RBP10.12□□□□□ -0.79
NSMCE1-202ENST00000561960 CDH15P55291 814 aa10.12□□□□□ -0.79
NSMCE1-202ENST00000561960 UBE2NP61088 152 aaKnown RBP10.12□□□□□ -0.79
NSMCE1-202ENST00000561960 H3F3AP84243 136 aa10.12□□□□□ -0.79
NSMCE1-202ENST00000561960 SYPL1Q16563 259 aa10.12□□□□□ -0.79
NSMCE1-202ENST00000561960 ZSWIM7Q19AV6 140 aa10.12□□□□□ -0.79
NSMCE1-202ENST00000561960 MSMPQ1L6U9 139 aa10.12□□□□□ -0.79
NSMCE1-202ENST00000561960 ALKBH6Q3KRA9 238 aa10.12□□□□□ -0.79
NSMCE1-202ENST00000561960 XKR7Q5GH72 579 aa10.12□□□□□ -0.79
NSMCE1-202ENST00000561960 NIPAL3Q6P499 406 aa10.12□□□□□ -0.79
NSMCE1-202ENST00000561960 ANKRD16Q6P6B7 361 aa10.12□□□□□ -0.79
NSMCE1-202ENST00000561960 RIMKLAQ8IXN7 391 aa10.12□□□□□ -0.79
NSMCE1-202ENST00000561960 ANKFN1Q8N957 763 aa10.12□□□□□ -0.79
NSMCE1-202ENST00000561960 SEMA6DQ8NFY4 1073 aa10.12□□□□□ -0.79
NSMCE1-202ENST00000561960 KIF18AQ8NI77 898 aa10.12□□□□□ -0.79
NSMCE1-202ENST00000561960 UBLCP1Q8WVY7 318 aaPredicted RBP10.12□□□□□ -0.79
NSMCE1-202ENST00000561960 ROPN1LQ96C74 230 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms