RNA–Protein interactions for RNA: ENST00000561940.1

SMG1-204, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 964 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-204ENST00000561940 A2MP01023 1474 aa4.53□□□□□ -1.68
SMG1-204ENST00000561940 IQGAP1P46940 1657 aa4.53□□□□□ -1.68
SMG1-204ENST00000561940 RTEL1-TNFRSF6BF6WH68 1400 aa4.53□□□□□ -1.68
SMG1-204ENST00000561940 PHF3Q92576 2039 aaKnown RBP4.53□□□□□ -1.68
SMG1-204ENST00000561940 STRCP1A6NGW2 1772 aa4.53□□□□□ -1.69
SMG1-204ENST00000561940 PHLPP1O60346 1717 aa4.52□□□□□ -1.69
SMG1-204ENST00000561940 POLR1AO95602 1720 aaPredicted RBP4.52□□□□□ -1.69
SMG1-204ENST00000561940 SUPT6HQ7KZ85 1726 aaKnown RBP4.52□□□□□ -1.69
SMG1-204ENST00000561940 ARHGAP23Q9P227 1491 aa4.52□□□□□ -1.69
SMG1-204ENST00000561940 F5H6K3 240 aa4.52□□□□□ -1.69
SMG1-204ENST00000561940 TNFSF11O14788 317 aa4.52□□□□□ -1.69
SMG1-204ENST00000561940 NBR2O15453 112 aa4.52□□□□□ -1.69
SMG1-204ENST00000561940 SERF1AO75920 110 aa4.52□□□□□ -1.69
SMG1-204ENST00000561940 P2RY4P51582 365 aa4.52□□□□□ -1.69
SMG1-204ENST00000561940 KLRC3Q07444 240 aa4.52□□□□□ -1.69
SMG1-204ENST00000561940 EGFEM1PQ0D2K5 195 aa4.52□□□□□ -1.69
SMG1-204ENST00000561940 SLC10A7Q0GE19 358 aa4.52□□□□□ -1.69
SMG1-204ENST00000561940 LRRC36Q1X8D7 754 aa4.52□□□□□ -1.69
SMG1-204ENST00000561940 RNF212Q495C1 297 aa4.52□□□□□ -1.69
SMG1-204ENST00000561940 SFT2D3Q587I9 215 aa4.52□□□□□ -1.69
SMG1-204ENST00000561940 ZNF544Q6NX49 715 aa4.52□□□□□ -1.69
SMG1-204ENST00000561940 EFL1Q7Z2Z2 1120 aaKnown RBP4.52□□□□□ -1.69
SMG1-204ENST00000561940 DHDDSQ86SQ9 333 aa4.52□□□□□ -1.69
SMG1-204ENST00000561940 ZNF589Q86UQ0 364 aaPredicted RBP4.52□□□□□ -1.69
SMG1-204ENST00000561940 NRMQ8IXM6 262 aa4.52□□□□□ -1.69
SMG1-204ENST00000561940 LRRC75A-AS1Q8N1F1 130 aa4.52□□□□□ -1.69
SMG1-204ENST00000561940 BHLHE23Q8NDY6 225 aa4.52□□□□□ -1.69
SMG1-204ENST00000561940 FGGYQ96C11 551 aa4.52□□□□□ -1.69
SMG1-204ENST00000561940 MYCBPQ99417 103 aaPredicted RBP4.52□□□□□ -1.69
SMG1-204ENST00000561940 ZBTB18Q99592 522 aa4.52□□□□□ -1.69
SMG1-204ENST00000561940 GCOM2Q9BZD3 368 aaPredicted RBP4.52□□□□□ -1.69
SMG1-204ENST00000561940 TMEM9Q9P0T7 183 aa4.52□□□□□ -1.69
SMG1-204ENST00000561940 ADAM28Q9UKQ2 775 aa4.52□□□□□ -1.69
SMG1-204ENST00000561940 ABCA6Q8N139 1617 aa4.52□□□□□ -1.69
SMG1-204ENST00000561940 ARHGAP5Q13017 1502 aa4.51□□□□□ -1.69
SMG1-204ENST00000561940 NKTRP30414 1462 aaKnown RBP4.51□□□□□ -1.69
SMG1-204ENST00000561940 RALGAPBQ86X10 1494 aa4.51□□□□□ -1.69
SMG1-204ENST00000561940 AHDC1Q5TGY3 1603 aaPredicted RBP4.51□□□□□ -1.69
SMG1-204ENST00000561940 ZFP92A6NM28 416 aa4.51□□□□□ -1.69
SMG1-204ENST00000561940 E7ESA3 106 aa4.51□□□□□ -1.69
SMG1-204ENST00000561940 RAMP3O60896 148 aa4.51□□□□□ -1.69
SMG1-204ENST00000561940 TBL1XO60907 577 aa4.51□□□□□ -1.69
SMG1-204ENST00000561940 ATP5LO75964 103 aa4.51□□□□□ -1.69
SMG1-204ENST00000561940 LYPD3O95274 346 aa4.51□□□□□ -1.69
SMG1-204ENST00000561940 IGKV3-15P01624 115 aa4.51□□□□□ -1.69
SMG1-204ENST00000561940 HSPB1P04792 205 aaKnown RBP4.51□□□□□ -1.69
SMG1-204ENST00000561940 HTR1FP30939 366 aa4.51□□□□□ -1.69
SMG1-204ENST00000561940 MAP3K8P41279 467 aa4.51□□□□□ -1.69
SMG1-204ENST00000561940 QARSP47897 775 aaKnown RBP4.51□□□□□ -1.69
SMG1-204ENST00000561940 TDO2P48775 406 aa4.51□□□□□ -1.69
SMG1-204ENST00000561940 KLRB1Q12918 225 aa4.51□□□□□ -1.69
SMG1-204ENST00000561940 VGLL4Q14135 290 aa4.51□□□□□ -1.69
SMG1-204ENST00000561940 SLC15A2Q16348 729 aa4.51□□□□□ -1.69
SMG1-204ENST00000561940 DMRTC1Q5HYR2 192 aa4.51□□□□□ -1.69
SMG1-204ENST00000561940 LCE3EQ5T5B0 92 aa4.51□□□□□ -1.69
SMG1-204ENST00000561940 HSD17B13Q7Z5P4 300 aaPredicted RBP4.51□□□□□ -1.69
SMG1-204ENST00000561940 LCA5Q86VQ0 697 aa4.51□□□□□ -1.69
SMG1-204ENST00000561940 ZNF564Q8TBZ8 553 aaPredicted RBP4.51□□□□□ -1.69
SMG1-204ENST00000561940 FAM110BQ8TC76 370 aa4.51□□□□□ -1.69
SMG1-204ENST00000561940 SCFD1Q8WVM8 642 aa4.51□□□□□ -1.69
SMG1-204ENST00000561940 TCTEX1D2Q8WW35 142 aa4.51□□□□□ -1.69
SMG1-204ENST00000561940 MAIP1Q8WWC4 291 aa4.51□□□□□ -1.69
SMG1-204ENST00000561940 TIMD4Q96H15 378 aa4.51□□□□□ -1.69
SMG1-204ENST00000561940 CNOT6LQ96LI5 555 aaKnown RBP4.51□□□□□ -1.69
SMG1-204ENST00000561940 RBM14Q96PK6 669 aaKnown RBP4.51□□□□□ -1.69
SMG1-204ENST00000561940 GAL3ST1Q99999 423 aa4.51□□□□□ -1.69
SMG1-204ENST00000561940 MAPKAP1Q9BPZ7 522 aa4.51□□□□□ -1.69
SMG1-204ENST00000561940 CNPY3Q9BT09 278 aa4.51□□□□□ -1.69
SMG1-204ENST00000561940 SMYD3Q9H7B4 428 aa4.51□□□□□ -1.69
SMG1-204ENST00000561940 PTGES2Q9H7Z7 377 aa4.51□□□□□ -1.69
SMG1-204ENST00000561940 PNPLA6Q8IY17 1366 aa4.51□□□□□ -1.69
SMG1-204ENST00000561940 MAP3K1Q13233 1512 aa4.51□□□□□ -1.69
SMG1-204ENST00000561940 CLSPNQ9HAW4 1339 aa4.5□□□□□ -1.69
SMG1-204ENST00000561940 KIAA1107Q9UPP5 1409 aa4.5□□□□□ -1.69
SMG1-204ENST00000561940 ZNF318Q5VUA4 2279 aa4.5□□□□□ -1.69
SMG1-204ENST00000561940 A0A0G2JRQ6 117 aa4.5□□□□□ -1.69
SMG1-204ENST00000561940 EPOPA6NHQ4 379 aa4.5□□□□□ -1.69
SMG1-204ENST00000561940 FOXE1O00358 373 aaPredicted RBP4.5□□□□□ -1.69
SMG1-204ENST00000561940 PRKAB2O43741 272 aa4.5□□□□□ -1.69
SMG1-204ENST00000561940 PFKFB2O60825 505 aa4.5□□□□□ -1.69
SMG1-204ENST00000561940 B4GALT2O60909 372 aa4.5□□□□□ -1.69
SMG1-204ENST00000561940 LYPLA1O75608 230 aaPredicted RBP4.5□□□□□ -1.69
SMG1-204ENST00000561940 SCGNO76038 276 aa4.5□□□□□ -1.69
SMG1-204ENST00000561940 LALBAP00709 142 aa4.5□□□□□ -1.69
SMG1-204ENST00000561940 OPN1MWP04001 364 aa4.5□□□□□ -1.69
SMG1-204ENST00000561940 SEMG1P04279 462 aa4.5□□□□□ -1.69
SMG1-204ENST00000561940 OPN1MW2P0DN77 364 aa4.5□□□□□ -1.69
SMG1-204ENST00000561940 OPN1MW3P0DN78 364 aa4.5□□□□□ -1.69
SMG1-204ENST00000561940 DBTP11182 482 aaKnown RBP4.5□□□□□ -1.69
SMG1-204ENST00000561940 RNH1P13489 461 aaKnown RBP4.5□□□□□ -1.69
SMG1-204ENST00000561940 ZBTB25P24278 435 aa4.5□□□□□ -1.69
SMG1-204ENST00000561940 YWHABP31946 246 aaKnown RBP4.5□□□□□ -1.69
SMG1-204ENST00000561940 RPL13AP40429 203 aaKnown RBP4.5□□□□□ -1.69
SMG1-204ENST00000561940 PTGDSP41222 190 aa4.5□□□□□ -1.69
SMG1-204ENST00000561940 ATP1B3P54709 279 aa4.5□□□□□ -1.69
SMG1-204ENST00000561940 ZMYND11Q15326 602 aa4.5□□□□□ -1.69
SMG1-204ENST00000561940 OR2G6Q5TZ20 316 aa4.5□□□□□ -1.69
SMG1-204ENST00000561940 OLFML2AQ68BL7 652 aa4.5□□□□□ -1.69
SMG1-204ENST00000561940 MRPS31Q92665 395 aaKnown RBP4.5□□□□□ -1.69
SMG1-204ENST00000561940 NEIL2Q969S2 332 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms