RNA–Protein interactions for RNA: ENST00000561431.1

LRRC28-222, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 754 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-222ENST00000561431 WBP2Q969T9 261 aa3.63□□□□□ -1.83
LRRC28-222ENST00000561431 TSNARE1Q96NA8 513 aa3.63□□□□□ -1.83
LRRC28-222ENST00000561431 KRT12Q99456 494 aa3.63□□□□□ -1.83
LRRC28-222ENST00000561431 FEVQ99581 238 aa3.63□□□□□ -1.83
LRRC28-222ENST00000561431 NPAS2Q99743 824 aa3.63□□□□□ -1.83
LRRC28-222ENST00000561431 CIB1Q99828 191 aa3.63□□□□□ -1.83
LRRC28-222ENST00000561431 ATG101Q9BSB4 218 aa3.63□□□□□ -1.83
LRRC28-222ENST00000561431 RHNO1Q9BSD3 238 aa3.63□□□□□ -1.83
LRRC28-222ENST00000561431 URM1Q9BTM9 101 aaKnown RBP3.63□□□□□ -1.83
LRRC28-222ENST00000561431 MIS12Q9H081 205 aa3.63□□□□□ -1.83
LRRC28-222ENST00000561431 RAB1BQ9H0U4 201 aa3.63□□□□□ -1.83
LRRC28-222ENST00000561431 FAM124BQ9H5Z6 455 aaPredicted RBP3.63□□□□□ -1.83
LRRC28-222ENST00000561431 NMUR1Q9HB89 426 aa3.63□□□□□ -1.83
LRRC28-222ENST00000561431 ZBTB20Q9HC78 741 aaPredicted RBP3.63□□□□□ -1.83
LRRC28-222ENST00000561431 ZNF160Q9HCG1 818 aa3.63□□□□□ -1.83
LRRC28-222ENST00000561431 MRPL40Q9NQ50 206 aaKnown RBP3.63□□□□□ -1.83
LRRC28-222ENST00000561431 GKN1Q9NS71 199 aa3.63□□□□□ -1.83
LRRC28-222ENST00000561431 C2orf42Q9NWW7 574 aa3.63□□□□□ -1.83
LRRC28-222ENST00000561431 SLC2A8Q9NY64 477 aa3.63□□□□□ -1.83
LRRC28-222ENST00000561431 RSPH14Q9UHP6 348 aa3.63□□□□□ -1.83
LRRC28-222ENST00000561431 RWDD2AQ9UIY3 292 aa3.63□□□□□ -1.83
LRRC28-222ENST00000561431 NAGKQ9UJ70 344 aa3.63□□□□□ -1.83
LRRC28-222ENST00000561431 ERRFI1Q9UJM3 462 aaPredicted RBP3.63□□□□□ -1.83
LRRC28-222ENST00000561431 ZNF229Q9UJW7 825 aa3.63□□□□□ -1.83
LRRC28-222ENST00000561431 ZNF580Q9UK33 172 aa3.63□□□□□ -1.83
LRRC28-222ENST00000561431 VANGL2Q9ULK5 521 aa3.63□□□□□ -1.83
LRRC28-222ENST00000561431 NDRG2Q9UN36 371 aaKnown RBP3.63□□□□□ -1.83
LRRC28-222ENST00000561431 FRYLO94915 3013 aa3.63□□□□□ -1.83
LRRC28-222ENST00000561431 VPS13AQ96RL7 3174 aa3.62□□□□□ -1.83
LRRC28-222ENST00000561431 ZNF638Q14966 1978 aaKnown RBP3.62□□□□□ -1.83
LRRC28-222ENST00000561431 ILVBLA1L0T0 632 aa3.62□□□□□ -1.83
LRRC28-222ENST00000561431 BCLAF3A2AJT9 711 aaKnown RBP3.62□□□□□ -1.83
LRRC28-222ENST00000561431 ANTXRLA6NF34 631 aa3.62□□□□□ -1.83
LRRC28-222ENST00000561431 C5orf60A6NFR6 353 aa3.62□□□□□ -1.83
LRRC28-222ENST00000561431 MGAT4DA6NG13 374 aa3.62□□□□□ -1.83
LRRC28-222ENST00000561431 DUXAA6NLW8 204 aa3.62□□□□□ -1.83
LRRC28-222ENST00000561431 WASHC1A8K0Z3 465 aa3.62□□□□□ -1.83
LRRC28-222ENST00000561431 CYSRT1A8MQ03 144 aa3.62□□□□□ -1.83
LRRC28-222ENST00000561431 PRR32B1ATL7 298 aa3.62□□□□□ -1.83
LRRC28-222ENST00000561431 H0YIG0 161 aa3.62□□□□□ -1.83
LRRC28-222ENST00000561431 GAPDHSO14556 408 aaPredicted RBP3.62□□□□□ -1.83
LRRC28-222ENST00000561431 AIM2O14862 343 aa3.62□□□□□ -1.83
LRRC28-222ENST00000561431 ARPC3O15145 178 aa3.62□□□□□ -1.83
LRRC28-222ENST00000561431 GATCO43716 136 aaKnown RBP3.62□□□□□ -1.83
LRRC28-222ENST00000561431 NME2P1O60361 137 aa3.62□□□□□ -1.83
LRRC28-222ENST00000561431 LMX1BO60663 402 aa3.62□□□□□ -1.83
LRRC28-222ENST00000561431 ANXA5P08758 320 aa3.62□□□□□ -1.83
LRRC28-222ENST00000561431 DANCRP0C864 163 aa3.62□□□□□ -1.83
LRRC28-222ENST00000561431 CEACAM1P13688 526 aa3.62□□□□□ -1.83
LRRC28-222ENST00000561431 GNSP15586 552 aa3.62□□□□□ -1.83
LRRC28-222ENST00000561431 NQO2P16083 231 aa3.62□□□□□ -1.83
LRRC28-222ENST00000561431 PAICSP22234 425 aaKnown RBP3.62□□□□□ -1.83
LRRC28-222ENST00000561431 ACKR3P25106 362 aa3.62□□□□□ -1.83
LRRC28-222ENST00000561431 ELAVL4P26378 380 aaKnown RBP3.62□□□□□ -1.83
LRRC28-222ENST00000561431 OXTRP30559 389 aa3.62□□□□□ -1.83
LRRC28-222ENST00000561431 OPRD1P41143 372 aa3.62□□□□□ -1.83
LRRC28-222ENST00000561431 MNDAP41218 407 aa3.62□□□□□ -1.83
LRRC28-222ENST00000561431 P2RY2P41231 377 aa3.62□□□□□ -1.83
LRRC28-222ENST00000561431 CDKN2CP42773 168 aa3.62□□□□□ -1.83
LRRC28-222ENST00000561431 NSFP46459 744 aaKnown RBP3.62□□□□□ -1.83
LRRC28-222ENST00000561431 NPBWR1P48145 328 aa3.62□□□□□ -1.83
LRRC28-222ENST00000561431 ASCL1P50553 236 aa3.62□□□□□ -1.83
LRRC28-222ENST00000561431 MAPK12P53778 367 aa3.62□□□□□ -1.83
LRRC28-222ENST00000561431 FOLH1Q04609 750 aa3.62□□□□□ -1.83
LRRC28-222ENST00000561431 STX5Q13190 355 aa3.62□□□□□ -1.83
LRRC28-222ENST00000561431 PMS2P3Q13401 168 aa3.62□□□□□ -1.83
LRRC28-222ENST00000561431 RUNX3Q13761 415 aa3.62□□□□□ -1.83
LRRC28-222ENST00000561431 PDGFRLQ15198 375 aa3.62□□□□□ -1.83
LRRC28-222ENST00000561431 TAF13Q15543 124 aa3.62□□□□□ -1.83
LRRC28-222ENST00000561431 PSG3Q16557 428 aa3.62□□□□□ -1.83
LRRC28-222ENST00000561431 C18orf21Q32NC0 220 aaPredicted RBP3.62□□□□□ -1.83
LRRC28-222ENST00000561431 ALKBH6Q3KRA9 238 aa3.62□□□□□ -1.83
LRRC28-222ENST00000561431 ZNF528Q3MIS6 628 aa3.62□□□□□ -1.83
LRRC28-222ENST00000561431 C2CD6Q53TS8 623 aa3.62□□□□□ -1.83
LRRC28-222ENST00000561431 LRRC73Q5JTD7 316 aa3.62□□□□□ -1.83
LRRC28-222ENST00000561431 CTSL3PQ5NE16 218 aa3.62□□□□□ -1.83
LRRC28-222ENST00000561431 ELFN2Q5R3F8 820 aa3.62□□□□□ -1.83
LRRC28-222ENST00000561431 BEND6Q5SZJ8 279 aaPredicted RBP3.62□□□□□ -1.83
LRRC28-222ENST00000561431 GPR157Q5UAW9 335 aa3.62□□□□□ -1.83
LRRC28-222ENST00000561431 C1orf94Q6P1W5 598 aa3.62□□□□□ -1.83
LRRC28-222ENST00000561431 CBLN3Q6UW01 205 aa3.62□□□□□ -1.83
LRRC28-222ENST00000561431 ENPP7Q6UWV6 458 aa3.62□□□□□ -1.83
LRRC28-222ENST00000561431 WASH2PQ6VEQ5 465 aa3.62□□□□□ -1.83
LRRC28-222ENST00000561431 SSX9Q7RTT3 188 aa3.62□□□□□ -1.83
LRRC28-222ENST00000561431 ARHGAP22Q7Z5H3 698 aa3.62□□□□□ -1.83
LRRC28-222ENST00000561431 ZNF554Q86TJ5 538 aa3.62□□□□□ -1.83
LRRC28-222ENST00000561431 SLC51BQ86UW2 128 aa3.62□□□□□ -1.83
LRRC28-222ENST00000561431 RBM45Q8IUH3 476 aaKnown RBP3.62□□□□□ -1.83
LRRC28-222ENST00000561431 TMEM126BQ8IUX1 230 aa3.62□□□□□ -1.83
LRRC28-222ENST00000561431 NUDCD3Q8IVD9 361 aa3.62□□□□□ -1.83
LRRC28-222ENST00000561431 LAX1Q8IWV1 398 aa3.62□□□□□ -1.83
LRRC28-222ENST00000561431 ZNF683Q8IZ20 524 aa3.62□□□□□ -1.83
LRRC28-222ENST00000561431 SELENOHQ8IZQ5 122 aaKnown RBP3.62□□□□□ -1.83
LRRC28-222ENST00000561431 IQCKQ8N0W5 287 aa3.62□□□□□ -1.83
LRRC28-222ENST00000561431 FAM86B1Q8N7N1 296 aa3.62□□□□□ -1.83
LRRC28-222ENST00000561431 SUMF1Q8NBK3 374 aa3.62□□□□□ -1.83
LRRC28-222ENST00000561431 OR5D13Q8NGL4 314 aa3.62□□□□□ -1.83
LRRC28-222ENST00000561431 GRHL3Q8TE85 626 aa3.62□□□□□ -1.83
LRRC28-222ENST00000561431 CACNG8Q8WXS5 425 aa3.62□□□□□ -1.83
LRRC28-222ENST00000561431 PHYHIPQ92561 330 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms