RNA–Protein interactions for RNA: ENST00000561395.5

TPM1-231, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 673 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-231ENST00000561395 TMCO6Q96DC7 493 aa6.84□□□□□ -1.31
TPM1-231ENST00000561395 BPIFA2Q96DR5 249 aa6.84□□□□□ -1.31
TPM1-231ENST00000561395 SH3YL1Q96HL8 342 aaPredicted RBP6.84□□□□□ -1.31
TPM1-231ENST00000561395 NODALQ96S42 347 aa6.84□□□□□ -1.31
TPM1-231ENST00000561395 RASL10BQ96S79 203 aa6.84□□□□□ -1.31
TPM1-231ENST00000561395 KLHDC3Q9BQ90 382 aa6.84□□□□□ -1.31
TPM1-231ENST00000561395 FAM192AQ9GZU8 254 aa6.84□□□□□ -1.31
TPM1-231ENST00000561395 C12orf10Q9HB07 376 aa6.84□□□□□ -1.31
TPM1-231ENST00000561395 ZBTB20Q9HC78 741 aaPredicted RBP6.84□□□□□ -1.31
TPM1-231ENST00000561395 ZNF160Q9HCG1 818 aa6.84□□□□□ -1.31
TPM1-231ENST00000561395 ATP13A2Q9NQ11 1180 aa6.84□□□□□ -1.31
TPM1-231ENST00000561395 MEPEQ9NQ76 525 aaPredicted RBP6.84□□□□□ -1.31
TPM1-231ENST00000561395 C20orf141Q9NUB4 165 aa6.84□□□□□ -1.31
TPM1-231ENST00000561395 PLCXD1Q9NUJ7 323 aa6.84□□□□□ -1.31
TPM1-231ENST00000561395 TBC1D23Q9NUY8 699 aa6.84□□□□□ -1.31
TPM1-231ENST00000561395 IL20Q9NYY1 176 aa6.84□□□□□ -1.31
TPM1-231ENST00000561395 ICAM5Q9UMF0 924 aa6.84□□□□□ -1.31
TPM1-231ENST00000561395 TPRKBQ9Y3C4 175 aa6.84□□□□□ -1.31
TPM1-231ENST00000561395 MTORP42345 2549 aa6.83□□□□□ -1.32
TPM1-231ENST00000561395 IGKV1D-42A0A075B6H8 117 aa6.83□□□□□ -1.32
TPM1-231ENST00000561395 SMIM31A0A1B0GVY4 71 aa6.83□□□□□ -1.32
TPM1-231ENST00000561395 SH3D21A4FU49 640 aa6.83□□□□□ -1.32
TPM1-231ENST00000561395 ELOA3DA6NLF2 546 aaPredicted RBP6.83□□□□□ -1.32
TPM1-231ENST00000561395 TTLL8A6PVC2 850 aa6.83□□□□□ -1.32
TPM1-231ENST00000561395 EFCAB9A8MZ26 197 aa6.83□□□□□ -1.32
TPM1-231ENST00000561395 GNB5O14775 395 aa6.83□□□□□ -1.32
TPM1-231ENST00000561395 HCRTR2O43614 444 aa6.83□□□□□ -1.32
TPM1-231ENST00000561395 RAD1O60671 282 aa6.83□□□□□ -1.32
TPM1-231ENST00000561395 MRPS14O60783 128 aaKnown RBP6.83□□□□□ -1.32
TPM1-231ENST00000561395 FAM20BO75063 409 aa6.83□□□□□ -1.32
TPM1-231ENST00000561395 ITGA10O75578 1167 aa6.83□□□□□ -1.32
TPM1-231ENST00000561395 HPP00738 406 aa6.83□□□□□ -1.32
TPM1-231ENST00000561395 IGF2P01344 180 aa6.83□□□□□ -1.32
TPM1-231ENST00000561395 PGCP20142 388 aa6.83□□□□□ -1.32
TPM1-231ENST00000561395 SOX3P41225 446 aa6.83□□□□□ -1.32
TPM1-231ENST00000561395 SLC1A3P43003 542 aa6.83□□□□□ -1.32
TPM1-231ENST00000561395 GIPRP48546 466 aa6.83□□□□□ -1.32
TPM1-231ENST00000561395 PCYT1AP49585 367 aa6.83□□□□□ -1.32
TPM1-231ENST00000561395 P2RX1P51575 399 aa6.83□□□□□ -1.32
TPM1-231ENST00000561395 FXYD6P3P58550 94 aa6.83□□□□□ -1.32
TPM1-231ENST00000561395 SLC35A2P78381 396 aa6.83□□□□□ -1.32
TPM1-231ENST00000561395 IL10RAQ13651 578 aa6.83□□□□□ -1.32
TPM1-231ENST00000561395 CBFBQ13951 182 aa6.83□□□□□ -1.32
TPM1-231ENST00000561395 PGGHGQ32M88 737 aa6.83□□□□□ -1.32
TPM1-231ENST00000561395 ZNF791Q3KP31 576 aaPredicted RBP6.83□□□□□ -1.32
TPM1-231ENST00000561395 ELOA3BQ3SY89 546 aa6.83□□□□□ -1.32
TPM1-231ENST00000561395 ACSM5Q6NUN0 579 aa6.83□□□□□ -1.32
TPM1-231ENST00000561395 RPL13AP3Q6NVV1 102 aa6.83□□□□□ -1.32
TPM1-231ENST00000561395 SLC27A4Q6P1M0 643 aa6.83□□□□□ -1.32
TPM1-231ENST00000561395 CASP12Q6UXS9 341 aa6.83□□□□□ -1.32
TPM1-231ENST00000561395 KCTD8Q6ZWB6 473 aa6.83□□□□□ -1.32
TPM1-231ENST00000561395 SATL1Q86VE3 508 aa6.83□□□□□ -1.32
TPM1-231ENST00000561395 P3H2Q8IVL5 708 aa6.83□□□□□ -1.32
TPM1-231ENST00000561395 CDK20Q8IZL9 346 aa6.83□□□□□ -1.32
TPM1-231ENST00000561395 ARMC10Q8N2F6 343 aa6.83□□□□□ -1.32
TPM1-231ENST00000561395 ELOA3Q8NG57 546 aa6.83□□□□□ -1.32
TPM1-231ENST00000561395 OR10G3Q8NGC4 313 aa6.83□□□□□ -1.32
TPM1-231ENST00000561395 OR5M3Q8NGP4 307 aa6.83□□□□□ -1.32
TPM1-231ENST00000561395 OR13C2Q8NGS9 318 aa6.83□□□□□ -1.32
TPM1-231ENST00000561395 B4GALNT2Q8NHY0 566 aa6.83□□□□□ -1.32
TPM1-231ENST00000561395 ZNF563Q8TA94 476 aa6.83□□□□□ -1.32
TPM1-231ENST00000561395 GPR119Q8TDV5 335 aa6.83□□□□□ -1.32
TPM1-231ENST00000561395 TRUB1Q8WWH5 349 aaKnown RBP6.83□□□□□ -1.32
TPM1-231ENST00000561395 IPCEF1Q8WWN9 437 aaPredicted RBP6.83□□□□□ -1.32
TPM1-231ENST00000561395 NACC2Q96BF6 587 aa6.83□□□□□ -1.32
TPM1-231ENST00000561395 ZNF524Q96C55 264 aa6.83□□□□□ -1.32
TPM1-231ENST00000561395 SPACA9Q96E40 222 aaPredicted RBP6.83□□□□□ -1.32
TPM1-231ENST00000561395 SAMD8Q96LT4 415 aa6.83□□□□□ -1.32
TPM1-231ENST00000561395 SIGLEC11Q96RL6 698 aa6.83□□□□□ -1.32
TPM1-231ENST00000561395 RHNO1Q9BSD3 238 aa6.83□□□□□ -1.32
TPM1-231ENST00000561395 TMEM43Q9BTV4 400 aa6.83□□□□□ -1.32
TPM1-231ENST00000561395 TSSK6Q9BXA6 273 aa6.83□□□□□ -1.32
TPM1-231ENST00000561395 GPR87Q9BY21 358 aa6.83□□□□□ -1.32
TPM1-231ENST00000561395 POLDIP3Q9BY77 421 aaKnown RBP6.83□□□□□ -1.32
TPM1-231ENST00000561395 PRRG3Q9BZD7 231 aa6.83□□□□□ -1.32
TPM1-231ENST00000561395 SLC19A3Q9BZV2 496 aa6.83□□□□□ -1.32
TPM1-231ENST00000561395 ADAM19Q9H013 955 aa6.83□□□□□ -1.32
TPM1-231ENST00000561395 DUSP21Q9H596 190 aa6.83□□□□□ -1.32
TPM1-231ENST00000561395 CCNB1IP1Q9NPC3 277 aa6.83□□□□□ -1.32
TPM1-231ENST00000561395 FKBP14Q9NWM8 211 aa6.83□□□□□ -1.32
TPM1-231ENST00000561395 CLN6Q9NWW5 311 aa6.83□□□□□ -1.32
TPM1-231ENST00000561395 SCN3BQ9NY72 215 aa6.83□□□□□ -1.32
TPM1-231ENST00000561395 FBXL4Q9UKA2 621 aa6.83□□□□□ -1.32
TPM1-231ENST00000561395 FBN3Q75N90 2809 aa6.83□□□□□ -1.32
TPM1-231ENST00000561395 MPDZO75970 2070 aa6.83□□□□□ -1.32
TPM1-231ENST00000561395 IGLV3-32A0A0A0MS00 114 aa6.82□□□□□ -1.32
TPM1-231ENST00000561395 LOC101059948A0A1B0GTJ6 334 aa6.82□□□□□ -1.32
TPM1-231ENST00000561395 HTR3EA5X5Y0 456 aa6.82□□□□□ -1.32
TPM1-231ENST00000561395 ANKUB1A6NFN9 424 aa6.82□□□□□ -1.32
TPM1-231ENST00000561395 PTGES3LE9PB15 166 aa6.82□□□□□ -1.32
TPM1-231ENST00000561395 RGS10O43665 173 aa6.82□□□□□ -1.32
TPM1-231ENST00000561395 PRKYO43930 277 aa6.82□□□□□ -1.32
TPM1-231ENST00000561395 CDC40O60508 579 aaKnown RBP eCLIP6.82□□□□□ -1.32
TPM1-231ENST00000561395 HCN1O60741 890 aa6.82□□□□□ -1.32
TPM1-231ENST00000561395 ENTPD6O75354 484 aa6.82□□□□□ -1.32
TPM1-231ENST00000561395 OR7A10O76100 309 aa6.82□□□□□ -1.32
TPM1-231ENST00000561395 RCBTB2O95199 551 aa6.82□□□□□ -1.32
TPM1-231ENST00000561395 SAGP10523 405 aaPredicted RBP6.82□□□□□ -1.32
TPM1-231ENST00000561395 ICAM2P13598 275 aa6.82□□□□□ -1.32
TPM1-231ENST00000561395 JUNBP17275 347 aaPredicted RBP6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms