RNA–Protein interactions for RNA: ENST00000561348.1

HERC1-212, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 588 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-212ENST00000561348 C1orf140Q5VVS0 124 aa9.01□□□□□ -0.97
HERC1-212ENST00000561348 AP1ARQ63HQ0 302 aa9.01□□□□□ -0.97
HERC1-212ENST00000561348 DHRS4L2Q6PKH6 230 aa9.01□□□□□ -0.97
HERC1-212ENST00000561348 DEF8Q6ZN54 512 aa9.01□□□□□ -0.97
HERC1-212ENST00000561348 GALNT5Q7Z7M9 940 aa9.01□□□□□ -0.97
HERC1-212ENST00000561348 WFDC8Q8IUA0 241 aa9.01□□□□□ -0.97
HERC1-212ENST00000561348 RBM45Q8IUH3 476 aaKnown RBP9.01□□□□□ -0.97
HERC1-212ENST00000561348 SLC30A8Q8IWU4 369 aa9.01□□□□□ -0.97
HERC1-212ENST00000561348 TMEM99Q8N816 258 aa9.01□□□□□ -0.97
HERC1-212ENST00000561348 BHLHE22Q8NFJ8 381 aaPredicted RBP9.01□□□□□ -0.97
HERC1-212ENST00000561348 NRGNQ92686 78 aa9.01□□□□□ -0.97
HERC1-212ENST00000561348 PROX1Q92786 737 aa9.01□□□□□ -0.97
HERC1-212ENST00000561348 C3orf49Q96BT1 292 aa9.01□□□□□ -0.97
HERC1-212ENST00000561348 TAMM41Q96BW9 452 aa9.01□□□□□ -0.97
HERC1-212ENST00000561348 CMTM5Q96DZ9 223 aa9.01□□□□□ -0.97
HERC1-212ENST00000561348 WFIKKN1Q96NZ8 548 aa9.01□□□□□ -0.97
HERC1-212ENST00000561348 PSD2Q9BQI7 771 aa9.01□□□□□ -0.97
HERC1-212ENST00000561348 WFDC6Q9BQY6 131 aa9.01□□□□□ -0.97
HERC1-212ENST00000561348 RSPO3Q9BXY4 272 aaPredicted RBP9.01□□□□□ -0.97
HERC1-212ENST00000561348 POLDIP3Q9BY77 421 aaKnown RBP9.01□□□□□ -0.97
HERC1-212ENST00000561348 MCCC2Q9HCC0 563 aa9.01□□□□□ -0.97
HERC1-212ENST00000561348 FANCFQ9NPI8 374 aa9.01□□□□□ -0.97
HERC1-212ENST00000561348 PLSCR4Q9NRQ2 329 aa9.01□□□□□ -0.97
HERC1-212ENST00000561348 JKAMPQ9P055 326 aa9.01□□□□□ -0.97
HERC1-212ENST00000561348 EMC3Q9P0I2 261 aa9.01□□□□□ -0.97
HERC1-212ENST00000561348 UNC79Q9P2D8 2635 aa9.01□□□□□ -0.97
HERC1-212ENST00000561348 PRSS50Q9UI38 385 aa9.01□□□□□ -0.97
HERC1-212ENST00000561348 ARL2BPQ9Y2Y0 163 aa9.01□□□□□ -0.97
HERC1-212ENST00000561348 ELOVL7A1L3X0 281 aa9□□□□□ -0.97
HERC1-212ENST00000561348 ZNF814B7Z6K7 855 aa9□□□□□ -0.97
HERC1-212ENST00000561348 ETV2O00321 342 aaPredicted RBP9□□□□□ -0.97
HERC1-212ENST00000561348 FAAHO00519 579 aa9□□□□□ -0.97
HERC1-212ENST00000561348 KPNA4O00629 521 aaPredicted RBP9□□□□□ -0.97
HERC1-212ENST00000561348 ZNF208O43345 1280 aa9□□□□□ -0.97
HERC1-212ENST00000561348 CYTIPO60759 359 aa9□□□□□ -0.97
HERC1-212ENST00000561348 GCM2O75603 506 aaPredicted RBP9□□□□□ -0.97
HERC1-212ENST00000561348 SERPINI2O75830 405 aa9□□□□□ -0.97
HERC1-212ENST00000561348 KRT33AO76009 404 aa9□□□□□ -0.97
HERC1-212ENST00000561348 ZNF682O95780 498 aa9□□□□□ -0.97
HERC1-212ENST00000561348 ADAP00813 363 aa9□□□□□ -0.97
HERC1-212ENST00000561348 CGAP01215 116 aa9□□□□□ -0.97
HERC1-212ENST00000561348 IFNA14P01570 189 aa9□□□□□ -0.97
HERC1-212ENST00000561348 EPXP11678 715 aa9□□□□□ -0.97
HERC1-212ENST00000561348 NQO1P15559 274 aaKnown RBP9□□□□□ -0.97
HERC1-212ENST00000561348 IGFBP2P18065 325 aa9□□□□□ -0.97
HERC1-212ENST00000561348 CDH2P19022 906 aaPredicted RBP9□□□□□ -0.97
HERC1-212ENST00000561348 CD247P20963 164 aa9□□□□□ -0.97
HERC1-212ENST00000561348 IL32P24001 234 aa9□□□□□ -0.97
HERC1-212ENST00000561348 FKBP2P26885 142 aaKnown RBP9□□□□□ -0.97
HERC1-212ENST00000561348 UGT2B10P36537 528 aa9□□□□□ -0.97
HERC1-212ENST00000561348 PEX19P40855 299 aa9□□□□□ -0.97
HERC1-212ENST00000561348 OR1E2P47887 323 aa9□□□□□ -0.97
HERC1-212ENST00000561348 CLK1P49759 484 aaKnown RBP9□□□□□ -0.97
HERC1-212ENST00000561348 PSME3P61289 254 aa9□□□□□ -0.97
HERC1-212ENST00000561348 STK11Q15831 433 aa9□□□□□ -0.97
HERC1-212ENST00000561348 FBXL19-AS1Q494R0 122 aa9□□□□□ -0.97
HERC1-212ENST00000561348 C9orf135Q5VTT2 229 aa9□□□□□ -0.97
HERC1-212ENST00000561348 ERICH5Q6P6B1 374 aa9□□□□□ -0.97
HERC1-212ENST00000561348 ULK3Q6PHR2 472 aa9□□□□□ -0.97
HERC1-212ENST00000561348 CASP12Q6UXS9 341 aa9□□□□□ -0.97
HERC1-212ENST00000561348 BEND4Q6ZU67 534 aa9□□□□□ -0.97
HERC1-212ENST00000561348 NET1Q7Z628 596 aaPredicted RBP9□□□□□ -0.97
HERC1-212ENST00000561348 ATG4DQ86TL0 474 aaPredicted RBP9□□□□□ -0.97
HERC1-212ENST00000561348 CXorf67Q86X51 503 aaPredicted RBP9□□□□□ -0.97
HERC1-212ENST00000561348 MICU2Q8IYU8 434 aa9□□□□□ -0.97
HERC1-212ENST00000561348 KDM8Q8N371 416 aa9□□□□□ -0.97
HERC1-212ENST00000561348 RNF148Q8N7C7 305 aa9□□□□□ -0.97
HERC1-212ENST00000561348 OR6T1Q8NGN1 323 aa9□□□□□ -0.97
HERC1-212ENST00000561348 PIGXQ8TBF5 258 aa9□□□□□ -0.97
HERC1-212ENST00000561348 FAM222BQ8WU58 562 aa9□□□□□ -0.97
HERC1-212ENST00000561348 FAM162AQ96A26 154 aa9□□□□□ -0.97
HERC1-212ENST00000561348 KTI12Q96EK9 354 aaPredicted RBP9□□□□□ -0.97
HERC1-212ENST00000561348 SLC47A1Q96FL8 570 aa9□□□□□ -0.97
HERC1-212ENST00000561348 LURAP1Q96LR2 239 aa9□□□□□ -0.97
HERC1-212ENST00000561348 ZNF583Q96ND8 569 aa9□□□□□ -0.97
HERC1-212ENST00000561348 LRRC37BQ96QE4 947 aa9□□□□□ -0.97
HERC1-212ENST00000561348 CLEC4MQ9H2X3 399 aaPredicted RBP9□□□□□ -0.97
HERC1-212ENST00000561348 CMTM6Q9NX76 183 aa9□□□□□ -0.97
HERC1-212ENST00000561348 ELOVL5Q9NYP7 299 aa9□□□□□ -0.97
HERC1-212ENST00000561348 TESQ9UGI8 421 aaKnown RBP9□□□□□ -0.97
HERC1-212ENST00000561348 SLC9A8Q9Y2E8 581 aa9□□□□□ -0.97
HERC1-212ENST00000561348 GMEB1Q9Y692 573 aa9□□□□□ -0.97
HERC1-212ENST00000561348 NAV2Q8IVL1 2488 aa9□□□□□ -0.97
HERC1-212ENST00000561348 ABCA12Q86UK0 2595 aa8.99□□□□□ -0.97
HERC1-212ENST00000561348 LIPT2A6NK58 231 aa8.99□□□□□ -0.97
HERC1-212ENST00000561348 A6NNC1 897 aa8.99□□□□□ -0.97
HERC1-212ENST00000561348 FAM220BPB1ANY3 271 aa8.99□□□□□ -0.97
HERC1-212ENST00000561348 EIF1BO60739 113 aaKnown RBP8.99□□□□□ -0.97
HERC1-212ENST00000561348 MRPL33O75394 65 aaKnown RBP8.99□□□□□ -0.97
HERC1-212ENST00000561348 GMNNO75496 209 aa8.99□□□□□ -0.97
HERC1-212ENST00000561348 DCTN3O75935 186 aa8.99□□□□□ -0.97
HERC1-212ENST00000561348 LYZL6O75951 148 aa8.99□□□□□ -0.97
HERC1-212ENST00000561348 LGI1O95970 557 aa8.99□□□□□ -0.97
HERC1-212ENST00000561348 PNMTP11086 282 aa8.99□□□□□ -0.97
HERC1-212ENST00000561348 NCK1P16333 377 aa8.99□□□□□ -0.97
HERC1-212ENST00000561348 TCN1P20061 433 aaPredicted RBP8.99□□□□□ -0.97
HERC1-212ENST00000561348 YAP1P46937 504 aaKnown RBP8.99□□□□□ -0.97
HERC1-212ENST00000561348 GZMMP51124 257 aa8.99□□□□□ -0.97
HERC1-212ENST00000561348 CDH12P55289 794 aa8.99□□□□□ -0.97
HERC1-212ENST00000561348 PCBP3P57721 371 aaKnown RBP8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms