RNA–Protein interactions for RNA: ENST00000561271.1

CDC42BPB-208, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-208ENST00000561271 IDUAP35475 653 aa15.18■□□□□ 0.02
CDC42BPB-208ENST00000561271 PTH2RP49190 550 aa15.18■□□□□ 0.02
CDC42BPB-208ENST00000561271 COPZ1P61923 177 aa15.18■□□□□ 0.02
CDC42BPB-208ENST00000561271 PPA1Q15181 289 aa15.18■□□□□ 0.02
CDC42BPB-208ENST00000561271 PAGE3Q5JUK9 113 aa15.18■□□□□ 0.02
CDC42BPB-208ENST00000561271 FBXW9Q5XUX1 488 aa15.18■□□□□ 0.02
CDC42BPB-208ENST00000561271 WBP2NLQ6ICG8 309 aa15.18■□□□□ 0.02
CDC42BPB-208ENST00000561271 ADAM5Q6NVV9 412 aa15.18■□□□□ 0.02
CDC42BPB-208ENST00000561271 HDXQ7Z353 690 aa15.18■□□□□ 0.02
CDC42BPB-208ENST00000561271 YTHDF3Q7Z739 585 aaKnown RBP15.18■□□□□ 0.02
CDC42BPB-208ENST00000561271 ZNF433Q8N7K0 673 aaPredicted RBP15.18■□□□□ 0.02
CDC42BPB-208ENST00000561271 BBS10Q8TAM1 723 aa15.18■□□□□ 0.02
CDC42BPB-208ENST00000561271 TMEM171Q8WVE6 324 aa15.18■□□□□ 0.02
CDC42BPB-208ENST00000561271 Q96MF0 132 aa15.18■□□□□ 0.02
CDC42BPB-208ENST00000561271 SMR3AQ99954 134 aa15.18■□□□□ 0.02
CDC42BPB-208ENST00000561271 SPATA9Q9BWV2 254 aa15.18■□□□□ 0.02
CDC42BPB-208ENST00000561271 NGBQ9NPG2 151 aa15.18■□□□□ 0.02
CDC42BPB-208ENST00000561271 NPAP1Q9NZP6 1156 aa15.18■□□□□ 0.02
CDC42BPB-208ENST00000561271 VAPAQ9P0L0 249 aa15.18■□□□□ 0.02
CDC42BPB-208ENST00000561271 YLPM1P49750 1951 aaKnown RBP15.18■□□□□ 0.02
CDC42BPB-208ENST00000561271 FN1P02751 2386 aaKnown RBP15.17■□□□□ 0.02
CDC42BPB-208ENST00000561271 C5orf58C9J3I9 102 aa15.17■□□□□ 0.02
CDC42BPB-208ENST00000561271 EIF1BO60739 113 aaKnown RBP15.17■□□□□ 0.02
CDC42BPB-208ENST00000561271 MRPL33O75394 65 aaKnown RBP15.17■□□□□ 0.02
CDC42BPB-208ENST00000561271 AKR7A3O95154 331 aa15.17■□□□□ 0.02
CDC42BPB-208ENST00000561271 CNOT4O95628 575 aaKnown RBP15.17■□□□□ 0.02
CDC42BPB-208ENST00000561271 ARAFP10398 606 aa15.17■□□□□ 0.02
CDC42BPB-208ENST00000561271 H2AFXP16104 143 aaPredicted RBP15.17■□□□□ 0.02
CDC42BPB-208ENST00000561271 GGT1P19440 569 aa15.17■□□□□ 0.02
CDC42BPB-208ENST00000561271 FOXG1P55316 489 aaPredicted RBP15.17■□□□□ 0.02
CDC42BPB-208ENST00000561271 HOXC5Q00444 222 aa15.17■□□□□ 0.02
CDC42BPB-208ENST00000561271 CEACAM7Q14002 265 aa15.17■□□□□ 0.02
CDC42BPB-208ENST00000561271 SQLEQ14534 574 aa15.17■□□□□ 0.02
CDC42BPB-208ENST00000561271 OR7A5Q15622 319 aa15.17■□□□□ 0.02
CDC42BPB-208ENST00000561271 AGKQ53H12 422 aa15.17■□□□□ 0.02
CDC42BPB-208ENST00000561271 ZNF311Q5JNZ3 666 aa15.17■□□□□ 0.02
CDC42BPB-208ENST00000561271 OTUD3Q5T2D3 398 aaPredicted RBP15.17■□□□□ 0.02
CDC42BPB-208ENST00000561271 GCNT6Q5T4J0 391 aa15.17■□□□□ 0.02
CDC42BPB-208ENST00000561271 PAQR6Q6TCH4 344 aa15.17■□□□□ 0.02
CDC42BPB-208ENST00000561271 ZNF611Q8N823 705 aa15.17■□□□□ 0.02
CDC42BPB-208ENST00000561271 LILRB1Q8NHL6 650 aaPredicted RBP15.17■□□□□ 0.02
CDC42BPB-208ENST00000561271 NFKBIDQ8NI38 313 aa15.17■□□□□ 0.02
CDC42BPB-208ENST00000561271 C18orf12Q96KH6 178 aa15.17■□□□□ 0.02
CDC42BPB-208ENST00000561271 NAA11Q9BSU3 229 aaPredicted RBP15.17■□□□□ 0.02
CDC42BPB-208ENST00000561271 IKZF5Q9H5V7 419 aa15.17■□□□□ 0.02
CDC42BPB-208ENST00000561271 BCL2L10Q9HD36 194 aa15.17■□□□□ 0.02
CDC42BPB-208ENST00000561271 SLC52A3Q9NQ40 469 aa15.17■□□□□ 0.02
CDC42BPB-208ENST00000561271 MALT1Q9UDY8 824 aa15.17■□□□□ 0.02
CDC42BPB-208ENST00000561271 SLC9A8Q9Y2E8 581 aa15.17■□□□□ 0.02
CDC42BPB-208ENST00000561271 FLVCR1Q9Y5Y0 555 aa15.17■□□□□ 0.02
CDC42BPB-208ENST00000561271 TRBV5-3A0A0A0MS03 114 aa15.16■□□□□ 0.02
CDC42BPB-208ENST00000561271 DPRXA6NFQ7 191 aa15.16■□□□□ 0.02
CDC42BPB-208ENST00000561271 LIPT2A6NK58 231 aa15.16■□□□□ 0.02
CDC42BPB-208ENST00000561271 OR5H1A6NKK0 313 aa15.16■□□□□ 0.02
CDC42BPB-208ENST00000561271 PGM3O95394 542 aa15.16■□□□□ 0.02
CDC42BPB-208ENST00000561271 GPIP06744 558 aa15.16■□□□□ 0.02
CDC42BPB-208ENST00000561271 ATP4BP51164 291 aa15.16■□□□□ 0.02
CDC42BPB-208ENST00000561271 MAP2K6P52564 334 aa15.16■□□□□ 0.02
CDC42BPB-208ENST00000561271 FAPQ12884 760 aa15.16■□□□□ 0.02
CDC42BPB-208ENST00000561271 TIMM23BQ5SRD1 257 aa15.16■□□□□ 0.02
CDC42BPB-208ENST00000561271 PRAMEF8Q5VWM4 474 aa15.16■□□□□ 0.02
CDC42BPB-208ENST00000561271 PRAMEF7Q5VXH5 474 aa15.16■□□□□ 0.02
CDC42BPB-208ENST00000561271 TMEM99Q8N816 258 aa15.16■□□□□ 0.02
CDC42BPB-208ENST00000561271 OR52E4Q8NGH9 312 aa15.16■□□□□ 0.02
CDC42BPB-208ENST00000561271 OR52N5Q8NH56 324 aa15.16■□□□□ 0.02
CDC42BPB-208ENST00000561271 CKAP2Q8WWK9 683 aa15.16■□□□□ 0.02
CDC42BPB-208ENST00000561271 FBXW5Q969U6 566 aa15.16■□□□□ 0.02
CDC42BPB-208ENST00000561271 C3orf49Q96BT1 292 aa15.16■□□□□ 0.02
CDC42BPB-208ENST00000561271 MAGEB18Q96M61 343 aa15.16■□□□□ 0.02
CDC42BPB-208ENST00000561271 USB1Q9BQ65 265 aaKnown RBP15.16■□□□□ 0.02
CDC42BPB-208ENST00000561271 GSX2Q9BZM3 304 aa15.16■□□□□ 0.02
CDC42BPB-208ENST00000561271 ARGLU1Q9NWB6 273 aaPredicted RBP15.16■□□□□ 0.02
CDC42BPB-208ENST00000561271 ASB6Q9NWX5 421 aa15.16■□□□□ 0.02
CDC42BPB-208ENST00000561271 ADPRHL2Q9NX46 363 aa15.16■□□□□ 0.02
CDC42BPB-208ENST00000561271 NIPSNAP3AQ9UFN0 247 aaPredicted RBP15.16■□□□□ 0.02
CDC42BPB-208ENST00000561271 ZNF232Q9UNY5 417 aa15.16■□□□□ 0.02
CDC42BPB-208ENST00000561271 LAMP3Q9UQV4 416 aa15.16■□□□□ 0.02
CDC42BPB-208ENST00000561271 IFT52Q9Y366 437 aa15.16■□□□□ 0.02
CDC42BPB-208ENST00000561271 A0A1W2PR80 420 aa15.15■□□□□ 0.02
CDC42BPB-208ENST00000561271 CIB4A0PJX0 185 aa15.15■□□□□ 0.02
CDC42BPB-208ENST00000561271 TRIM64A6NGJ6 449 aa15.15■□□□□ 0.02
CDC42BPB-208ENST00000561271 TRIM64BA6NI03 449 aa15.15■□□□□ 0.02
CDC42BPB-208ENST00000561271 CCT8L1PA6NM43 557 aa15.15■□□□□ 0.02
CDC42BPB-208ENST00000561271 TMEM229AB2RXF0 380 aa15.15■□□□□ 0.02
CDC42BPB-208ENST00000561271 H7C1Q1 480 aa15.15■□□□□ 0.02
CDC42BPB-208ENST00000561271 ITGA5P08648 1049 aa15.15■□□□□ 0.02
CDC42BPB-208ENST00000561271 INHBBP09529 407 aa15.15■□□□□ 0.02
CDC42BPB-208ENST00000561271 SLC17A1Q14916 467 aa15.15■□□□□ 0.02
CDC42BPB-208ENST00000561271 ZSWIM7Q19AV6 140 aa15.15■□□□□ 0.02
CDC42BPB-208ENST00000561271 C9orf135Q5VTT2 229 aa15.15■□□□□ 0.02
CDC42BPB-208ENST00000561271 Q71RC1 249 aaPredicted RBP15.15■□□□□ 0.02
CDC42BPB-208ENST00000561271 BIVMQ86UB2 503 aa15.15■□□□□ 0.02
CDC42BPB-208ENST00000561271 COMTD1Q86VU5 262 aa15.15■□□□□ 0.02
CDC42BPB-208ENST00000561271 CIARTQ8N365 385 aaPredicted RBP15.15■□□□□ 0.02
CDC42BPB-208ENST00000561271 MUCL1Q96DR8 90 aa15.15■□□□□ 0.02
CDC42BPB-208ENST00000561271 RSPO3Q9BXY4 272 aaPredicted RBP15.15■□□□□ 0.02
CDC42BPB-208ENST00000561271 CXorf56Q9H5V9 222 aa15.15■□□□□ 0.02
CDC42BPB-208ENST00000561271 ARMC7Q9H6L4 198 aa15.15■□□□□ 0.02
CDC42BPB-208ENST00000561271 VIPAS39Q9H9C1 493 aa15.15■□□□□ 0.02
CDC42BPB-208ENST00000561271 TAS2R16Q9NYV7 291 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 199.7 ms