RNA–Protein interactions for RNA: ENST00000561076.1

RTF1-207, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-207ENST00000561076 FANK1Q8TC84 345 aa1.78□□□□□ -2.12
RTF1-207ENST00000561076 MAPK15Q8TD08 544 aa1.78□□□□□ -2.12
RTF1-207ENST00000561076 ACER1Q8TDN7 264 aa1.78□□□□□ -2.12
RTF1-207ENST00000561076 SORCS1Q8WY21 1168 aa1.78□□□□□ -2.12
RTF1-207ENST00000561076 TM9SF4Q92544 642 aa1.78□□□□□ -2.12
RTF1-207ENST00000561076 UFD1Q92890 307 aa1.78□□□□□ -2.12
RTF1-207ENST00000561076 TOP1MTQ969P6 601 aa1.78□□□□□ -2.12
RTF1-207ENST00000561076 BIRC7Q96CA5 298 aa1.78□□□□□ -2.12
RTF1-207ENST00000561076 MOCOSQ96EN8 888 aa1.78□□□□□ -2.12
RTF1-207ENST00000561076 ZNF354BQ96LW1 612 aa1.78□□□□□ -2.12
RTF1-207ENST00000561076 ZFP3Q96NJ6 502 aa1.78□□□□□ -2.12
RTF1-207ENST00000561076 RNF2Q99496 336 aa1.78□□□□□ -2.12
RTF1-207ENST00000561076 CIB1Q99828 191 aa1.78□□□□□ -2.12
RTF1-207ENST00000561076 UTP23Q9BRU9 249 aaKnown RBP1.78□□□□□ -2.12
RTF1-207ENST00000561076 RBM4Q9BWF3 364 aaKnown RBP1.78□□□□□ -2.12
RTF1-207ENST00000561076 NAT10Q9H0A0 1025 aaKnown RBP1.78□□□□□ -2.12
RTF1-207ENST00000561076 ING2Q9H160 280 aa1.78□□□□□ -2.12
RTF1-207ENST00000561076 KIR3DX1Q9H7L2 352 aa1.78□□□□□ -2.12
RTF1-207ENST00000561076 Q9HAA7 133 aa1.78□□□□□ -2.12
RTF1-207ENST00000561076 PELI2Q9HAT8 420 aa1.78□□□□□ -2.12
RTF1-207ENST00000561076 BEX1Q9HBH7 125 aa1.78□□□□□ -2.12
RTF1-207ENST00000561076 TMEM165Q9HC07 324 aa1.78□□□□□ -2.12
RTF1-207ENST00000561076 MRM3Q9HC36 420 aaKnown RBP1.78□□□□□ -2.12
RTF1-207ENST00000561076 C6orf50Q9HD87 102 aa1.78□□□□□ -2.12
RTF1-207ENST00000561076 OR2S2Q9NQN1 319 aa1.78□□□□□ -2.12
RTF1-207ENST00000561076 STARD5Q9NSY2 213 aa1.78□□□□□ -2.12
RTF1-207ENST00000561076 INTS9Q9NV88 658 aaKnown RBP1.78□□□□□ -2.12
RTF1-207ENST00000561076 OCIAD1Q9NX40 245 aa1.78□□□□□ -2.12
RTF1-207ENST00000561076 THUMPD1Q9NXG2 353 aaKnown RBP1.78□□□□□ -2.12
RTF1-207ENST00000561076 CD274Q9NZQ7 290 aa1.78□□□□□ -2.12
RTF1-207ENST00000561076 CCDC59Q9P031 241 aaKnown RBP1.78□□□□□ -2.12
RTF1-207ENST00000561076 STK17AQ9UEE5 414 aa1.78□□□□□ -2.12
RTF1-207ENST00000561076 PDE10AQ9Y233 779 aa1.78□□□□□ -2.12
RTF1-207ENST00000561076 GOLT1BQ9Y3E0 138 aa1.78□□□□□ -2.12
RTF1-207ENST00000561076 TESMINQ9Y4I5 508 aa1.78□□□□□ -2.12
RTF1-207ENST00000561076 RNF115Q9Y4L5 304 aa1.78□□□□□ -2.12
RTF1-207ENST00000561076 RNF114Q9Y508 228 aa1.78□□□□□ -2.12
RTF1-207ENST00000561076 POLR3HQ9Y535 204 aaPredicted RBP1.78□□□□□ -2.12
RTF1-207ENST00000561076 INSL6Q9Y581 213 aa1.78□□□□□ -2.12
RTF1-207ENST00000561076 URGCP-MRPS24S4R325 110 aa1.78□□□□□ -2.12
RTF1-207ENST00000561076 MYO15BQ96JP2 1530 aa1.77□□□□□ -2.13
RTF1-207ENST00000561076 SAA2-SAA4A0A096LPE2 208 aa1.77□□□□□ -2.13
RTF1-207ENST00000561076 A0A0A6YYD4 124 aa1.77□□□□□ -2.13
RTF1-207ENST00000561076 TRBV9A0A0B4J1U6 114 aa1.77□□□□□ -2.13
RTF1-207ENST00000561076 A0A0G2JK05 382 aa1.77□□□□□ -2.13
RTF1-207ENST00000561076 ASPDHA6ND91 283 aa1.77□□□□□ -2.13
RTF1-207ENST00000561076 OR5B21A6NL26 309 aa1.77□□□□□ -2.13
RTF1-207ENST00000561076 ERI2A8K979 691 aaKnown RBP1.77□□□□□ -2.13
RTF1-207ENST00000561076 CENPBD1B2RD01 187 aa1.77□□□□□ -2.13
RTF1-207ENST00000561076 SEC14L6B5MCN3 397 aa1.77□□□□□ -2.13
RTF1-207ENST00000561076 SULT1C2O00338 296 aa1.77□□□□□ -2.13
RTF1-207ENST00000561076 ITGB1BP1O14713 200 aa1.77□□□□□ -2.13
RTF1-207ENST00000561076 TNFRSF13BO14836 293 aaPredicted RBP1.77□□□□□ -2.13
RTF1-207ENST00000561076 COCHO43405 550 aa1.77□□□□□ -2.13
RTF1-207ENST00000561076 PRKAB2O43741 272 aa1.77□□□□□ -2.13
RTF1-207ENST00000561076 CXCL13O43927 109 aa1.77□□□□□ -2.13
RTF1-207ENST00000561076 MPDU1O75352 247 aa1.77□□□□□ -2.13
RTF1-207ENST00000561076 NDUFS6O75380 124 aaKnown RBP1.77□□□□□ -2.13
RTF1-207ENST00000561076 RPP14O95059 124 aaKnown RBP1.77□□□□□ -2.13
RTF1-207ENST00000561076 OR5F1O95221 314 aa1.77□□□□□ -2.13
RTF1-207ENST00000561076 DEXIO95424 95 aa1.77□□□□□ -2.13
RTF1-207ENST00000561076 PSMG1O95456 288 aa1.77□□□□□ -2.13
RTF1-207ENST00000561076 SNAP29O95721 258 aa1.77□□□□□ -2.13
RTF1-207ENST00000561076 LSM8O95777 96 aaKnown RBP1.77□□□□□ -2.13
RTF1-207ENST00000561076 CLIC3O95833 236 aa1.77□□□□□ -2.13
RTF1-207ENST00000561076 LATS1O95835 1130 aa1.77□□□□□ -2.13
RTF1-207ENST00000561076 CST4P01036 141 aa1.77□□□□□ -2.13
RTF1-207ENST00000561076 JCHAINP01591 159 aa1.77□□□□□ -2.13
RTF1-207ENST00000561076 IGHV4-39P01824 125 aa1.77□□□□□ -2.13
RTF1-207ENST00000561076 PIGRP01833 764 aa1.77□□□□□ -2.13
RTF1-207ENST00000561076 FGGP02679 453 aa1.77□□□□□ -2.13
RTF1-207ENST00000561076 FCGR3AP08637 254 aa1.77□□□□□ -2.13
RTF1-207ENST00000561076 FGF3P11487 239 aaPredicted RBP1.77□□□□□ -2.13
RTF1-207ENST00000561076 LIFP15018 202 aa1.77□□□□□ -2.13
RTF1-207ENST00000561076 GATA1P15976 413 aaPredicted RBP1.77□□□□□ -2.13
RTF1-207ENST00000561076 MGMTP16455 207 aa1.77□□□□□ -2.13
RTF1-207ENST00000561076 XRCC1P18887 633 aaPredicted RBP1.77□□□□□ -2.13
RTF1-207ENST00000561076 COX5AP20674 150 aa1.77□□□□□ -2.13
RTF1-207ENST00000561076 KDELR2P33947 212 aa1.77□□□□□ -2.13
RTF1-207ENST00000561076 UGT1A3P35503 534 aa1.77□□□□□ -2.13
RTF1-207ENST00000561076 ACVR1BP36896 505 aa1.77□□□□□ -2.13
RTF1-207ENST00000561076 CSKP41240 450 aa1.77□□□□□ -2.13
RTF1-207ENST00000561076 QARSP47897 775 aaKnown RBP1.77□□□□□ -2.13
RTF1-207ENST00000561076 DNASE1L1P49184 302 aa1.77□□□□□ -2.13
RTF1-207ENST00000561076 PGFP49763 221 aa1.77□□□□□ -2.13
RTF1-207ENST00000561076 GDI2P50395 445 aaKnown RBP1.77□□□□□ -2.13
RTF1-207ENST00000561076 RIPK4P57078 832 aa1.77□□□□□ -2.13
RTF1-207ENST00000561076 OR1D5P58170 312 aa1.77□□□□□ -2.13
RTF1-207ENST00000561076 TAS2R60P59551 318 aa1.77□□□□□ -2.13
RTF1-207ENST00000561076 UBE2G2P60604 165 aa1.77□□□□□ -2.13
RTF1-207ENST00000561076 PRPS1P60891 318 aa1.77□□□□□ -2.13
RTF1-207ENST00000561076 ERVK-16P61578 105 aa1.77□□□□□ -2.13
RTF1-207ENST00000561076 IRX1P78414 480 aaPredicted RBP1.77□□□□□ -2.13
RTF1-207ENST00000561076 RPL24P83731 157 aaKnown RBP1.77□□□□□ -2.13
RTF1-207ENST00000561076 REEP5Q00765 189 aa1.77□□□□□ -2.13
RTF1-207ENST00000561076 GUCY2DQ02846 1103 aa1.77□□□□□ -2.13
RTF1-207ENST00000561076 PAX2Q02962 417 aa1.77□□□□□ -2.13
RTF1-207ENST00000561076 PLP2Q04941 152 aa1.77□□□□□ -2.13
RTF1-207ENST00000561076 OR5I1Q13606 314 aa1.77□□□□□ -2.13
RTF1-207ENST00000561076 LAGE3Q14657 143 aa1.77□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms