RNA–Protein interactions for RNA: ENST00000560983.1

HERC1-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-211ENST00000560983 RAET1LQ5VY80 246 aa3.16□□□□□ -1.9
HERC1-211ENST00000560983 KLHL17Q6TDP4 642 aa3.16□□□□□ -1.9
HERC1-211ENST00000560983 APTXQ7Z2E3 356 aaKnown RBP3.16□□□□□ -1.9
HERC1-211ENST00000560983 PIWIL4Q7Z3Z4 852 aaKnown RBP3.16□□□□□ -1.9
HERC1-211ENST00000560983 SPATA19Q7Z5L4 167 aa3.16□□□□□ -1.9
HERC1-211ENST00000560983 RIBC1Q8N443 379 aaPredicted RBP3.16□□□□□ -1.9
HERC1-211ENST00000560983 TBC1D19Q8N5T2 526 aa3.16□□□□□ -1.9
HERC1-211ENST00000560983 RNF10Q8N5U6 811 aaKnown RBP3.16□□□□□ -1.9
HERC1-211ENST00000560983 ZNF433Q8N7K0 673 aaPredicted RBP3.16□□□□□ -1.9
HERC1-211ENST00000560983 ACOT4Q8N9L9 421 aa3.16□□□□□ -1.9
HERC1-211ENST00000560983 IPCEF1Q8WWN9 437 aaPredicted RBP3.16□□□□□ -1.9
HERC1-211ENST00000560983 KTI12Q96EK9 354 aaPredicted RBP3.16□□□□□ -1.9
HERC1-211ENST00000560983 SNX22Q96L94 193 aa3.16□□□□□ -1.9
HERC1-211ENST00000560983 TSNARE1Q96NA8 513 aa3.16□□□□□ -1.9
HERC1-211ENST00000560983 MUS81Q96NY9 551 aa3.16□□□□□ -1.9
HERC1-211ENST00000560983 COL21A1Q96P44 957 aa3.16□□□□□ -1.9
HERC1-211ENST00000560983 F2RL3Q96RI0 385 aa3.16□□□□□ -1.9
HERC1-211ENST00000560983 NDNQ99608 321 aa3.16□□□□□ -1.9
HERC1-211ENST00000560983 RTN4RQ9BZR6 473 aa3.16□□□□□ -1.9
HERC1-211ENST00000560983 RPF2Q9H7B2 306 aaKnown RBP3.16□□□□□ -1.9
HERC1-211ENST00000560983 ANKZF1Q9H8Y5 726 aa3.16□□□□□ -1.9
HERC1-211ENST00000560983 LRRC40Q9H9A6 602 aa3.16□□□□□ -1.9
HERC1-211ENST00000560983 FKRPQ9H9S5 495 aa3.16□□□□□ -1.9
HERC1-211ENST00000560983 CXorf21Q9HAI6 301 aa3.16□□□□□ -1.9
HERC1-211ENST00000560983 ZBTB26Q9HCK0 441 aa3.16□□□□□ -1.9
HERC1-211ENST00000560983 CHRAC1Q9NRG0 131 aa3.16□□□□□ -1.9
HERC1-211ENST00000560983 CA10Q9NS85 328 aa3.16□□□□□ -1.9
HERC1-211ENST00000560983 TREX1Q9NSU2 369 aa3.16□□□□□ -1.9
HERC1-211ENST00000560983 LYARQ9NX58 379 aaKnown RBP3.16□□□□□ -1.9
HERC1-211ENST00000560983 TAS2R16Q9NYV7 291 aa3.16□□□□□ -1.9
HERC1-211ENST00000560983 MED11Q9P086 117 aa3.16□□□□□ -1.9
HERC1-211ENST00000560983 RPUSD1Q9UJJ7 312 aaKnown RBP3.16□□□□□ -1.9
HERC1-211ENST00000560983 ANAPC5Q9UJX4 755 aa3.16□□□□□ -1.9
HERC1-211ENST00000560983 MCTS1Q9ULC4 181 aaKnown RBP3.16□□□□□ -1.9
HERC1-211ENST00000560983 HEATR5BQ9P2D3 2071 aa3.16□□□□□ -1.9
HERC1-211ENST00000560983 A0A087X0T9 212 aa3.15□□□□□ -1.91
HERC1-211ENST00000560983 MDFIC2A0A1B0GVS7 189 aa3.15□□□□□ -1.91
HERC1-211ENST00000560983 OR6C70A6NIJ9 312 aa3.15□□□□□ -1.91
HERC1-211ENST00000560983 LGALS16A8MUM7 142 aa3.15□□□□□ -1.91
HERC1-211ENST00000560983 BTNL10A8MVZ5 291 aa3.15□□□□□ -1.91
HERC1-211ENST00000560983 GOLGA8KD6RF30 607 aa3.15□□□□□ -1.91
HERC1-211ENST00000560983 H3BMM5 538 aa3.15□□□□□ -1.91
HERC1-211ENST00000560983 GOLGA8TH3BQL2 631 aa3.15□□□□□ -1.91
HERC1-211ENST00000560983 H7C0C1 242 aa3.15□□□□□ -1.91
HERC1-211ENST00000560983 RTCAO00442 366 aaKnown RBP3.15□□□□□ -1.91
HERC1-211ENST00000560983 TNFSF11O14788 317 aa3.15□□□□□ -1.91
HERC1-211ENST00000560983 TRAF3IP2O43734 574 aaPredicted RBP3.15□□□□□ -1.91
HERC1-211ENST00000560983 TSPAN2O60636 221 aa3.15□□□□□ -1.91
HERC1-211ENST00000560983 FAM228BP0C875 321 aa3.15□□□□□ -1.91
HERC1-211ENST00000560983 SLC35E2BP0CK96 405 aa3.15□□□□□ -1.91
HERC1-211ENST00000560983 SLC35E2P0CK97 266 aa3.15□□□□□ -1.91
HERC1-211ENST00000560983 TNNT1P13805 278 aa3.15□□□□□ -1.91
HERC1-211ENST00000560983 ZNF10P21506 573 aaPredicted RBP3.15□□□□□ -1.91
HERC1-211ENST00000560983 PSMA4P25789 261 aaKnown RBP3.15□□□□□ -1.91
HERC1-211ENST00000560983 GPR6P46095 362 aaPredicted RBP3.15□□□□□ -1.91
HERC1-211ENST00000560983 ATP5OP48047 213 aa3.15□□□□□ -1.91
HERC1-211ENST00000560983 RFX3P48380 749 aa3.15□□□□□ -1.91
HERC1-211ENST00000560983 P2RX3P56373 397 aa3.15□□□□□ -1.91
HERC1-211ENST00000560983 IL1RL1Q01638 556 aa3.15□□□□□ -1.91
HERC1-211ENST00000560983 UBXN1Q04323 297 aa3.15□□□□□ -1.91
HERC1-211ENST00000560983 KLHL30Q0D2K2 578 aa3.15□□□□□ -1.91
HERC1-211ENST00000560983 GANABQ14697 944 aaKnown RBP3.15□□□□□ -1.91
HERC1-211ENST00000560983 NNATQ16517 81 aa3.15□□□□□ -1.91
HERC1-211ENST00000560983 ARL13AQ5H913 290 aaPredicted RBP3.15□□□□□ -1.91
HERC1-211ENST00000560983 DMRTC1Q5HYR2 192 aa3.15□□□□□ -1.91
HERC1-211ENST00000560983 TCHHL1Q5QJ38 904 aaPredicted RBP3.15□□□□□ -1.91
HERC1-211ENST00000560983 DCAF12L2Q5VW00 463 aa3.15□□□□□ -1.91
HERC1-211ENST00000560983 C18orf63Q68DL7 685 aa3.15□□□□□ -1.91
HERC1-211ENST00000560983 DUPD1Q68J44 220 aa3.15□□□□□ -1.91
HERC1-211ENST00000560983 ABLIM2Q6H8Q1 611 aa3.15□□□□□ -1.91
HERC1-211ENST00000560983 FIP1L1Q6UN15 594 aaKnown RBP3.15□□□□□ -1.91
HERC1-211ENST00000560983 CES3Q6UWW8 571 aa3.15□□□□□ -1.91
HERC1-211ENST00000560983 RAD9BQ6WBX8 426 aa3.15□□□□□ -1.91
HERC1-211ENST00000560983 C9orf139Q6ZV77 190 aa3.15□□□□□ -1.91
HERC1-211ENST00000560983 CENPUQ71F23 418 aa3.15□□□□□ -1.91
HERC1-211ENST00000560983 CPNE9Q8IYJ1 553 aa3.15□□□□□ -1.91
HERC1-211ENST00000560983 NKAPQ8N5F7 415 aaKnown RBP3.15□□□□□ -1.91
HERC1-211ENST00000560983 GPATCH11Q8N954 259 aa3.15□□□□□ -1.91
HERC1-211ENST00000560983 NOA1Q8NC60 698 aaKnown RBP3.15□□□□□ -1.91
HERC1-211ENST00000560983 FAM156AQ8NDB6 213 aa3.15□□□□□ -1.91
HERC1-211ENST00000560983 DEFB108BQ8NET1 73 aa3.15□□□□□ -1.91
HERC1-211ENST00000560983 OR4K17Q8NGC6 315 aa3.15□□□□□ -1.91
HERC1-211ENST00000560983 OR2V1Q8NHB1 315 aa3.15□□□□□ -1.91
HERC1-211ENST00000560983 RNF128Q8TEB7 428 aa3.15□□□□□ -1.91
HERC1-211ENST00000560983 ANKRD7Q92527 254 aa3.15□□□□□ -1.91
HERC1-211ENST00000560983 ZNF75CPQ92670 426 aaPredicted RBP3.15□□□□□ -1.91
HERC1-211ENST00000560983 TANKQ92844 425 aa3.15□□□□□ -1.91
HERC1-211ENST00000560983 OSTF1Q92882 214 aa3.15□□□□□ -1.91
HERC1-211ENST00000560983 PEX13Q92968 403 aa3.15□□□□□ -1.91
HERC1-211ENST00000560983 YIPF5Q969M3 257 aa3.15□□□□□ -1.91
HERC1-211ENST00000560983 TMBIM1Q969X1 311 aa3.15□□□□□ -1.91
HERC1-211ENST00000560983 TMCO6Q96DC7 493 aa3.15□□□□□ -1.91
HERC1-211ENST00000560983 PPP1R2P1Q96PQ5 205 aa3.15□□□□□ -1.91
HERC1-211ENST00000560983 NPAS1Q99742 590 aa3.15□□□□□ -1.91
HERC1-211ENST00000560983 AIF1LQ9BQI0 150 aa3.15□□□□□ -1.91
HERC1-211ENST00000560983 TBCDQ9BTW9 1192 aa3.15□□□□□ -1.91
HERC1-211ENST00000560983 CHIAQ9BZP6 476 aa3.15□□□□□ -1.91
HERC1-211ENST00000560983 SLC25A32Q9H2D1 315 aa3.15□□□□□ -1.91
HERC1-211ENST00000560983 ZNF665Q9H7R5 613 aa3.15□□□□□ -1.91
HERC1-211ENST00000560983 PELI2Q9HAT8 420 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms