RNA–Protein interactions for RNA: ENST00000560620.1

CTDSPL2-209, Transcript of CTD small phosphatase like 2, humanhuman

TSL 3

Gene CTDSPL2, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-209ENST00000560620 MRPL33O75394 65 aaKnown RBP11.51□□□□□ -0.57
CTDSPL2-209ENST00000560620 AKR7A3O95154 331 aa11.51□□□□□ -0.57
CTDSPL2-209ENST00000560620 AHSA1O95433 338 aa11.51□□□□□ -0.57
CTDSPL2-209ENST00000560620 IGHV3-9P01782 118 aa11.51□□□□□ -0.57
CTDSPL2-209ENST00000560620 HRGP04196 525 aa11.51□□□□□ -0.57
CTDSPL2-209ENST00000560620 PSMB1P20618 241 aaKnown RBP11.51□□□□□ -0.57
CTDSPL2-209ENST00000560620 DNASE1P24855 282 aa11.51□□□□□ -0.57
CTDSPL2-209ENST00000560620 ADSLP30566 484 aaPredicted RBP11.51□□□□□ -0.57
CTDSPL2-209ENST00000560620 OR3A2P47893 321 aa11.51□□□□□ -0.57
CTDSPL2-209ENST00000560620 RABL3Q5HYI8 236 aa11.51□□□□□ -0.57
CTDSPL2-209ENST00000560620 INTS11Q5TA45 600 aaKnown RBP11.51□□□□□ -0.57
CTDSPL2-209ENST00000560620 C1orf140Q5VVS0 124 aa11.51□□□□□ -0.57
CTDSPL2-209ENST00000560620 TMEM225Q6GV28 225 aa11.51□□□□□ -0.57
CTDSPL2-209ENST00000560620 NANOGP8Q6NSW7 305 aa11.51□□□□□ -0.57
CTDSPL2-209ENST00000560620 CASP12Q6UXS9 341 aa11.51□□□□□ -0.57
CTDSPL2-209ENST00000560620 GPAT4Q86UL3 456 aa11.51□□□□□ -0.57
CTDSPL2-209ENST00000560620 RANBP3LQ86VV4 465 aaPredicted RBP11.51□□□□□ -0.57
CTDSPL2-209ENST00000560620 PTOV1Q86YD1 416 aa11.51□□□□□ -0.57
CTDSPL2-209ENST00000560620 WFDC8Q8IUA0 241 aa11.51□□□□□ -0.57
CTDSPL2-209ENST00000560620 SLC30A8Q8IWU4 369 aa11.51□□□□□ -0.57
CTDSPL2-209ENST00000560620 KISS1RQ969F8 398 aaPredicted RBP11.51□□□□□ -0.57
CTDSPL2-209ENST00000560620 SLC35B4Q969S0 331 aa11.51□□□□□ -0.57
CTDSPL2-209ENST00000560620 APH1AQ96BI3 265 aa11.51□□□□□ -0.57
CTDSPL2-209ENST00000560620 C3orf49Q96BT1 292 aa11.51□□□□□ -0.57
CTDSPL2-209ENST00000560620 S100PBPQ96BU1 408 aa11.51□□□□□ -0.57
CTDSPL2-209ENST00000560620 SLC25A36Q96CQ1 311 aa11.51□□□□□ -0.57
CTDSPL2-209ENST00000560620 ZNF317Q96PQ6 595 aaPredicted RBP11.51□□□□□ -0.57
CTDSPL2-209ENST00000560620 POTEKPQ9BYX7 375 aa11.51□□□□□ -0.57
CTDSPL2-209ENST00000560620 TRIM2Q9C040 744 aa11.51□□□□□ -0.57
CTDSPL2-209ENST00000560620 NANOGQ9H9S0 305 aa11.51□□□□□ -0.57
CTDSPL2-209ENST00000560620 TMEM27Q9HBJ8 222 aa11.51□□□□□ -0.57
CTDSPL2-209ENST00000560620 CCM2LQ9NUG4 571 aaPredicted RBP11.51□□□□□ -0.57
CTDSPL2-209ENST00000560620 PRSS50Q9UI38 385 aa11.51□□□□□ -0.57
CTDSPL2-209ENST00000560620 ST6GALNAC2Q9UJ37 374 aa11.51□□□□□ -0.57
CTDSPL2-209ENST00000560620 ING1Q9UK53 422 aaPredicted RBP11.51□□□□□ -0.57
CTDSPL2-209ENST00000560620 PLEKHA6Q9Y2H5 1048 aa11.51□□□□□ -0.57
CTDSPL2-209ENST00000560620 LIPT2A6NK58 231 aa11.5□□□□□ -0.57
CTDSPL2-209ENST00000560620 ZNF716A6NP11 495 aa11.5□□□□□ -0.57
CTDSPL2-209ENST00000560620 ZNF814B7Z6K7 855 aa11.5□□□□□ -0.57
CTDSPL2-209ENST00000560620 M0QX08 132 aa11.5□□□□□ -0.57
CTDSPL2-209ENST00000560620 CCDC22O60826 627 aa11.5□□□□□ -0.57
CTDSPL2-209ENST00000560620 RAMP1O60894 148 aa11.5□□□□□ -0.57
CTDSPL2-209ENST00000560620 LYZL6O75951 148 aa11.5□□□□□ -0.57
CTDSPL2-209ENST00000560620 MFN2O95140 757 aa11.5□□□□□ -0.57
CTDSPL2-209ENST00000560620 NPPAP01160 153 aa11.5□□□□□ -0.57
CTDSPL2-209ENST00000560620 CRYGSP22914 178 aa11.5□□□□□ -0.57
CTDSPL2-209ENST00000560620 RPS5P46782 204 aaKnown RBP11.5□□□□□ -0.57
CTDSPL2-209ENST00000560620 ART1P52961 327 aa11.5□□□□□ -0.57
CTDSPL2-209ENST00000560620 DMTNQ08495 405 aa11.5□□□□□ -0.57
CTDSPL2-209ENST00000560620 ITGADQ13349 1161 aa11.5□□□□□ -0.57
CTDSPL2-209ENST00000560620 P2RY6Q15077 328 aa11.5□□□□□ -0.57
CTDSPL2-209ENST00000560620 PDK3Q15120 406 aa11.5□□□□□ -0.57
CTDSPL2-209ENST00000560620 STK11Q15831 433 aa11.5□□□□□ -0.57
CTDSPL2-209ENST00000560620 ALG10BQ5I7T1 473 aa11.5□□□□□ -0.57
CTDSPL2-209ENST00000560620 SFRP5Q5T4F7 317 aa11.5□□□□□ -0.57
CTDSPL2-209ENST00000560620 PAQR6Q6TCH4 344 aa11.5□□□□□ -0.57
CTDSPL2-209ENST00000560620 Q6ZT83 130 aa11.5□□□□□ -0.57
CTDSPL2-209ENST00000560620 PATL1Q86TB9 770 aaKnown RBP11.5□□□□□ -0.57
CTDSPL2-209ENST00000560620 ATG4DQ86TL0 474 aaPredicted RBP11.5□□□□□ -0.57
CTDSPL2-209ENST00000560620 LURAP1LQ8IV03 231 aa11.5□□□□□ -0.57
CTDSPL2-209ENST00000560620 GABRG1Q8N1C3 465 aa11.5□□□□□ -0.57
CTDSPL2-209ENST00000560620 POU5F2Q8N7G0 328 aa11.5□□□□□ -0.57
CTDSPL2-209ENST00000560620 TMEM99Q8N816 258 aa11.5□□□□□ -0.57
CTDSPL2-209ENST00000560620 C10orf82Q8WW14 230 aa11.5□□□□□ -0.57
CTDSPL2-209ENST00000560620 ELAC2Q9BQ52 826 aaKnown RBP11.5□□□□□ -0.57
CTDSPL2-209ENST00000560620 PRR14Q9BWN1 585 aa11.5□□□□□ -0.57
CTDSPL2-209ENST00000560620 PARPBPQ9NWS1 579 aa11.5□□□□□ -0.57
CTDSPL2-209ENST00000560620 TESQ9UGI8 421 aaKnown RBP11.5□□□□□ -0.57
CTDSPL2-209ENST00000560620 MYO9AB2RTY4 2548 aa11.49□□□□□ -0.57
CTDSPL2-209ENST00000560620 IGKV3D-15A0A087WSY6 115 aa11.49□□□□□ -0.57
CTDSPL2-209ENST00000560620 A0A1B0GWA3 101 aa11.49□□□□□ -0.57
CTDSPL2-209ENST00000560620 CIB4A0PJX0 185 aa11.49□□□□□ -0.57
CTDSPL2-209ENST00000560620 CCT8L1PA6NM43 557 aa11.49□□□□□ -0.57
CTDSPL2-209ENST00000560620 GCM2O75603 506 aaPredicted RBP11.49□□□□□ -0.57
CTDSPL2-209ENST00000560620 PNMTP11086 282 aa11.49□□□□□ -0.57
CTDSPL2-209ENST00000560620 HTR2AP28223 471 aa11.49□□□□□ -0.57
CTDSPL2-209ENST00000560620 PCGF2P35227 344 aa11.49□□□□□ -0.57
CTDSPL2-209ENST00000560620 IST1P53990 364 aa11.49□□□□□ -0.57
CTDSPL2-209ENST00000560620 SEC24CP53992 1094 aa11.49□□□□□ -0.57
CTDSPL2-209ENST00000560620 IL1RL1Q01638 556 aa11.49□□□□□ -0.57
CTDSPL2-209ENST00000560620 VMACQ2NL98 169 aa11.49□□□□□ -0.57
CTDSPL2-209ENST00000560620 COQ5Q5HYK3 327 aa11.49□□□□□ -0.57
CTDSPL2-209ENST00000560620 ULK3Q6PHR2 472 aa11.49□□□□□ -0.57
CTDSPL2-209ENST00000560620 C22orf34Q6ZV56 151 aa11.49□□□□□ -0.57
CTDSPL2-209ENST00000560620 BHLHA15Q7RTS1 189 aaPredicted RBP11.49□□□□□ -0.57
CTDSPL2-209ENST00000560620 SPATA21Q7Z572 469 aa11.49□□□□□ -0.57
CTDSPL2-209ENST00000560620 CPLX4Q7Z7G2 160 aa11.49□□□□□ -0.57
CTDSPL2-209ENST00000560620 COMTD1Q86VU5 262 aa11.49□□□□□ -0.57
CTDSPL2-209ENST00000560620 OR8J3Q8NGG0 315 aa11.49□□□□□ -0.57
CTDSPL2-209ENST00000560620 VANGL1Q8TAA9 524 aaPredicted RBP11.49□□□□□ -0.57
CTDSPL2-209ENST00000560620 STK35Q8TDR2 534 aa11.49□□□□□ -0.57
CTDSPL2-209ENST00000560620 DNAJA4Q8WW22 397 aaPredicted RBP11.49□□□□□ -0.57
CTDSPL2-209ENST00000560620 RCN3Q96D15 328 aa11.49□□□□□ -0.57
CTDSPL2-209ENST00000560620 SLC47A1Q96FL8 570 aa11.49□□□□□ -0.57
CTDSPL2-209ENST00000560620 NSRP1Q9H0G5 558 aaKnown RBP11.49□□□□□ -0.57
CTDSPL2-209ENST00000560620 UBTD1Q9HAC8 227 aa11.49□□□□□ -0.57
CTDSPL2-209ENST00000560620 UPB1Q9UBR1 384 aa11.49□□□□□ -0.57
CTDSPL2-209ENST00000560620 SLC9A8Q9Y2E8 581 aa11.49□□□□□ -0.57
CTDSPL2-209ENST00000560620 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.48□□□□□ -0.57
CTDSPL2-209ENST00000560620 AQP7P3A6NL99 342 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms