RNA–Protein interactions for RNA: ENST00000560383.5

SNRPA1-210, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-210ENST00000560383 SELPLGQ14242 412 aa13.46□□□□□ -0.25
SNRPA1-210ENST00000560383 EXOC3L2Q2M3D2 409 aa13.46□□□□□ -0.25
SNRPA1-210ENST00000560383 BIVMQ86UB2 503 aa13.46□□□□□ -0.25
SNRPA1-210ENST00000560383 COMTD1Q86VU5 262 aa13.46□□□□□ -0.25
SNRPA1-210ENST00000560383 KRT73Q86Y46 540 aa13.46□□□□□ -0.25
SNRPA1-210ENST00000560383 KRTAP1-3Q8IUG1 177 aa13.46□□□□□ -0.25
SNRPA1-210ENST00000560383 HIPK4Q8NE63 616 aa13.46□□□□□ -0.25
SNRPA1-210ENST00000560383 WFDC11Q8NEX6 87 aa13.46□□□□□ -0.25
SNRPA1-210ENST00000560383 PIGTQ969N2 578 aa13.46□□□□□ -0.25
SNRPA1-210ENST00000560383 C3orf49Q96BT1 292 aa13.46□□□□□ -0.25
SNRPA1-210ENST00000560383 ZHX1-C8orf76Q96EF9 292 aa13.46□□□□□ -0.25
SNRPA1-210ENST00000560383 ZNF300Q96RE9 604 aaPredicted RBP13.46□□□□□ -0.25
SNRPA1-210ENST00000560383 KLHL4Q9C0H6 718 aa13.46□□□□□ -0.25
SNRPA1-210ENST00000560383 C6orf203Q9P0P8 240 aaPredicted RBP13.46□□□□□ -0.25
SNRPA1-210ENST00000560383 PRORSD1PA6NEY8 169 aa13.45□□□□□ -0.26
SNRPA1-210ENST00000560383 TMEM229AB2RXF0 380 aa13.45□□□□□ -0.26
SNRPA1-210ENST00000560383 ZNF814B7Z6K7 855 aa13.45□□□□□ -0.26
SNRPA1-210ENST00000560383 FXYD1O00168 92 aa13.45□□□□□ -0.26
SNRPA1-210ENST00000560383 SLC22A2O15244 555 aa13.45□□□□□ -0.26
SNRPA1-210ENST00000560383 TPST1O60507 370 aa13.45□□□□□ -0.26
SNRPA1-210ENST00000560383 SERPINB7O75635 380 aa13.45□□□□□ -0.26
SNRPA1-210ENST00000560383 CNOT4O95628 575 aaKnown RBP13.45□□□□□ -0.26
SNRPA1-210ENST00000560383 NPPAP01160 153 aa13.45□□□□□ -0.26
SNRPA1-210ENST00000560383 THBDP07204 575 aa13.45□□□□□ -0.26
SNRPA1-210ENST00000560383 FPR1P21462 350 aa13.45□□□□□ -0.26
SNRPA1-210ENST00000560383 GZMMP51124 257 aa13.45□□□□□ -0.26
SNRPA1-210ENST00000560383 MTPNP58546 118 aa13.45□□□□□ -0.26
SNRPA1-210ENST00000560383 NFYCQ13952 458 aa13.45□□□□□ -0.26
SNRPA1-210ENST00000560383 P2RY6Q15077 328 aa13.45□□□□□ -0.26
SNRPA1-210ENST00000560383 TRMT5Q32P41 509 aaKnown RBP13.45□□□□□ -0.26
SNRPA1-210ENST00000560383 C6orf89Q6UWU4 347 aa13.45□□□□□ -0.26
SNRPA1-210ENST00000560383 GALNT5Q7Z7M9 940 aa13.45□□□□□ -0.26
SNRPA1-210ENST00000560383 ATG4DQ86TL0 474 aaPredicted RBP13.45□□□□□ -0.26
SNRPA1-210ENST00000560383 CADM2Q8N3J6 435 aa13.45□□□□□ -0.26
SNRPA1-210ENST00000560383 LSMEM1Q8N8F7 131 aa13.45□□□□□ -0.26
SNRPA1-210ENST00000560383 C11orf65Q8NCR3 313 aa13.45□□□□□ -0.26
SNRPA1-210ENST00000560383 BHLHE22Q8NFJ8 381 aaPredicted RBP13.45□□□□□ -0.26
SNRPA1-210ENST00000560383 PIGXQ8TBF5 258 aa13.45□□□□□ -0.26
SNRPA1-210ENST00000560383 ZNF607Q96SK3 696 aa13.45□□□□□ -0.26
SNRPA1-210ENST00000560383 HDHD5Q9BXW7 423 aa13.45□□□□□ -0.26
SNRPA1-210ENST00000560383 C12orf10Q9HB07 376 aa13.45□□□□□ -0.26
SNRPA1-210ENST00000560383 EMC3Q9P0I2 261 aa13.45□□□□□ -0.26
SNRPA1-210ENST00000560383 LIPT2A6NK58 231 aa13.44□□□□□ -0.26
SNRPA1-210ENST00000560383 BBIP1A8MTZ0 92 aa13.44□□□□□ -0.26
SNRPA1-210ENST00000560383 A8MVM7 634 aa13.44□□□□□ -0.26
SNRPA1-210ENST00000560383 ARHGEF9O43307 516 aa13.44□□□□□ -0.26
SNRPA1-210ENST00000560383 FRS3O43559 492 aa13.44□□□□□ -0.26
SNRPA1-210ENST00000560383 FZD7O75084 574 aa13.44□□□□□ -0.26
SNRPA1-210ENST00000560383 MFN2O95140 757 aa13.44□□□□□ -0.26
SNRPA1-210ENST00000560383 HOXB4P17483 251 aaPredicted RBP13.44□□□□□ -0.26
SNRPA1-210ENST00000560383 EDNRAP25101 427 aa13.44□□□□□ -0.26
SNRPA1-210ENST00000560383 OR2B6P58173 313 aa13.44□□□□□ -0.26
SNRPA1-210ENST00000560383 NKX6-1P78426 367 aaPredicted RBP13.44□□□□□ -0.26
SNRPA1-210ENST00000560383 GLIPR1L2Q4G1C9 344 aa13.44□□□□□ -0.26
SNRPA1-210ENST00000560383 PAQR6Q6TCH4 344 aa13.44□□□□□ -0.26
SNRPA1-210ENST00000560383 C20orf204Q6ZNR8 217 aa13.44□□□□□ -0.26
SNRPA1-210ENST00000560383 Q6ZT83 130 aa13.44□□□□□ -0.26
SNRPA1-210ENST00000560383 STEAP2Q8NFT2 490 aa13.44□□□□□ -0.26
SNRPA1-210ENST00000560383 STK35Q8TDR2 534 aa13.44□□□□□ -0.26
SNRPA1-210ENST00000560383 C10orf82Q8WW14 230 aa13.44□□□□□ -0.26
SNRPA1-210ENST00000560383 PIK3IP1Q96FE7 263 aa13.44□□□□□ -0.26
SNRPA1-210ENST00000560383 C18orf12Q96KH6 178 aa13.44□□□□□ -0.26
SNRPA1-210ENST00000560383 EVA1AQ9H8M9 152 aa13.44□□□□□ -0.26
SNRPA1-210ENST00000560383 ANGPT4Q9Y264 503 aa13.44□□□□□ -0.26
SNRPA1-210ENST00000560383 NAV3Q8IVL0 2385 aa13.44□□□□□ -0.26
SNRPA1-210ENST00000560383 GPR171O14626 319 aa13.43□□□□□ -0.26
SNRPA1-210ENST00000560383 RAMP1O60894 148 aa13.43□□□□□ -0.26
SNRPA1-210ENST00000560383 GPIP06744 558 aa13.43□□□□□ -0.26
SNRPA1-210ENST00000560383 HTR2AP28223 471 aa13.43□□□□□ -0.26
SNRPA1-210ENST00000560383 LOXP28300 417 aaPredicted RBP13.43□□□□□ -0.26
SNRPA1-210ENST00000560383 NTF4P34130 210 aa13.43□□□□□ -0.26
SNRPA1-210ENST00000560383 IDUAP35475 653 aa13.43□□□□□ -0.26
SNRPA1-210ENST00000560383 HOXC5Q00444 222 aa13.43□□□□□ -0.26
SNRPA1-210ENST00000560383 DMTNQ08495 405 aa13.43□□□□□ -0.26
SNRPA1-210ENST00000560383 ITGADQ13349 1161 aa13.43□□□□□ -0.26
SNRPA1-210ENST00000560383 CYLC2Q14093 348 aaPredicted RBP13.43□□□□□ -0.26
SNRPA1-210ENST00000560383 CAPRIN1Q14444 709 aaKnown RBP13.43□□□□□ -0.26
SNRPA1-210ENST00000560383 MAPRE2Q15555 327 aa13.43□□□□□ -0.26
SNRPA1-210ENST00000560383 ACKR1Q16570 336 aa13.43□□□□□ -0.26
SNRPA1-210ENST00000560383 CYP51A1Q16850 503 aa13.43□□□□□ -0.26
SNRPA1-210ENST00000560383 SFRP5Q5T4F7 317 aa13.43□□□□□ -0.26
SNRPA1-210ENST00000560383 ANKRD34AQ69YU3 496 aa13.43□□□□□ -0.26
SNRPA1-210ENST00000560383 NANOGP8Q6NSW7 305 aa13.43□□□□□ -0.26
SNRPA1-210ENST00000560383 PRSS57Q6UWY2 283 aa13.43□□□□□ -0.26
SNRPA1-210ENST00000560383 ARMC8Q8IUR7 673 aa13.43□□□□□ -0.26
SNRPA1-210ENST00000560383 CCDC103Q8IW40 242 aa13.43□□□□□ -0.26
SNRPA1-210ENST00000560383 SLC30A8Q8IWU4 369 aa13.43□□□□□ -0.26
SNRPA1-210ENST00000560383 OR8J3Q8NGG0 315 aa13.43□□□□□ -0.26
SNRPA1-210ENST00000560383 ZNF775Q96BV0 537 aaPredicted RBP13.43□□□□□ -0.26
SNRPA1-210ENST00000560383 LRRC58Q96CX6 371 aa13.43□□□□□ -0.26
SNRPA1-210ENST00000560383 USB1Q9BQ65 265 aaKnown RBP13.43□□□□□ -0.26
SNRPA1-210ENST00000560383 NAA11Q9BSU3 229 aaPredicted RBP13.43□□□□□ -0.26
SNRPA1-210ENST00000560383 TRIM2Q9C040 744 aa13.43□□□□□ -0.26
SNRPA1-210ENST00000560383 ACTR6Q9GZN1 396 aa13.43□□□□□ -0.26
SNRPA1-210ENST00000560383 NANOGQ9H9S0 305 aa13.43□□□□□ -0.26
SNRPA1-210ENST00000560383 FAM171A2A8MVW0 826 aa13.42□□□□□ -0.26
SNRPA1-210ENST00000560383 FTCDNL1E5RQL4 147 aa13.42□□□□□ -0.26
SNRPA1-210ENST00000560383 KLF4O43474 513 aa13.42□□□□□ -0.26
SNRPA1-210ENST00000560383 SMPD2O60906 423 aa13.42□□□□□ -0.26
SNRPA1-210ENST00000560383 ADAP00813 363 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms