RNA–Protein interactions for RNA: ENST00000559933.1

SPG11-220, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 2

Gene SPG11, Length 518 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-220ENST00000559933 SLC25A25Q6KCM7 469 aa4.71□□□□□ -1.66
SPG11-220ENST00000559933 SLC30A6Q6NXT4 461 aa4.71□□□□□ -1.66
SPG11-220ENST00000559933 ZFP1Q6P2D0 407 aa4.71□□□□□ -1.66
SPG11-220ENST00000559933 PODNL1Q6PEZ8 512 aa4.71□□□□□ -1.66
SPG11-220ENST00000559933 PCSK4Q6UW60 755 aa4.71□□□□□ -1.66
SPG11-220ENST00000559933 IGFL2Q6UWQ7 119 aa4.71□□□□□ -1.66
SPG11-220ENST00000559933 PIWIL3Q7Z3Z3 882 aaKnown RBP4.71□□□□□ -1.66
SPG11-220ENST00000559933 GALNT5Q7Z7M9 940 aa4.71□□□□□ -1.66
SPG11-220ENST00000559933 RANBP3LQ86VV4 465 aaPredicted RBP4.71□□□□□ -1.66
SPG11-220ENST00000559933 PLCZ1Q86YW0 608 aa4.71□□□□□ -1.66
SPG11-220ENST00000559933 GRAMD2AQ8IUY3 354 aa4.71□□□□□ -1.66
SPG11-220ENST00000559933 CMIPQ8IY22 773 aa4.71□□□□□ -1.66
SPG11-220ENST00000559933 OFCC1Q8IZS5 231 aa4.71□□□□□ -1.66
SPG11-220ENST00000559933 TMEM251Q8N6I4 163 aa4.71□□□□□ -1.66
SPG11-220ENST00000559933 EXD3Q8N9H8 876 aa4.71□□□□□ -1.66
SPG11-220ENST00000559933 TOR1AIP2Q8NFQ8 470 aa4.71□□□□□ -1.66
SPG11-220ENST00000559933 OR1J4Q8NGS1 313 aa4.71□□□□□ -1.66
SPG11-220ENST00000559933 OR5W2Q8NH69 310 aa4.71□□□□□ -1.66
SPG11-220ENST00000559933 SLC7A13Q8TCU3 470 aa4.71□□□□□ -1.66
SPG11-220ENST00000559933 RASSF5Q8WWW0 418 aa4.71□□□□□ -1.66
SPG11-220ENST00000559933 SMPDL3BQ92485 455 aa4.71□□□□□ -1.66
SPG11-220ENST00000559933 NTNG2Q96CW9 530 aa4.71□□□□□ -1.66
SPG11-220ENST00000559933 C1GALT1C1Q96EU7 318 aa4.71□□□□□ -1.66
SPG11-220ENST00000559933 SCMH1Q96GD3 660 aa4.71□□□□□ -1.66
SPG11-220ENST00000559933 TMEM41AQ96HV5 264 aa4.71□□□□□ -1.66
SPG11-220ENST00000559933 ZNF597Q96LX8 424 aa4.71□□□□□ -1.66
SPG11-220ENST00000559933 C5orf34Q96MH7 638 aa4.71□□□□□ -1.66
SPG11-220ENST00000559933 TAAR6Q96RI8 345 aa4.71□□□□□ -1.66
SPG11-220ENST00000559933 SMAD5Q99717 465 aaKnown RBP4.71□□□□□ -1.66
SPG11-220ENST00000559933 SLC29A1Q99808 456 aa4.71□□□□□ -1.66
SPG11-220ENST00000559933 NIPSNAP1Q9BPW8 284 aa4.71□□□□□ -1.66
SPG11-220ENST00000559933 FAM173AQ9BQD7 235 aa4.71□□□□□ -1.66
SPG11-220ENST00000559933 PRSS27Q9BQR3 290 aa4.71□□□□□ -1.66
SPG11-220ENST00000559933 TACO1Q9BSH4 297 aaKnown RBP4.71□□□□□ -1.66
SPG11-220ENST00000559933 FUZQ9BT04 418 aa4.71□□□□□ -1.66
SPG11-220ENST00000559933 FNDC11Q9BVV2 318 aa4.71□□□□□ -1.66
SPG11-220ENST00000559933 TTTY12Q9BZ98 90 aa4.71□□□□□ -1.66
SPG11-220ENST00000559933 OR11A1Q9GZK7 315 aa4.71□□□□□ -1.66
SPG11-220ENST00000559933 HOXD1Q9GZZ0 328 aa4.71□□□□□ -1.66
SPG11-220ENST00000559933 SLC6A15Q9H2J7 730 aa4.71□□□□□ -1.66
SPG11-220ENST00000559933 ZNF703Q9H7S9 590 aaPredicted RBP4.71□□□□□ -1.66
SPG11-220ENST00000559933 TRIM45Q9H8W5 580 aaPredicted RBP4.71□□□□□ -1.66
SPG11-220ENST00000559933 NMNAT1Q9HAN9 279 aaPredicted RBP4.71□□□□□ -1.66
SPG11-220ENST00000559933 EXOSC3Q9NQT5 275 aaKnown RBP4.71□□□□□ -1.66
SPG11-220ENST00000559933 ASH1LQ9NR48 2969 aaKnown RBP4.71□□□□□ -1.66
SPG11-220ENST00000559933 ACER3Q9NUN7 267 aa4.71□□□□□ -1.66
SPG11-220ENST00000559933 AP5S1Q9NUS5 200 aa4.71□□□□□ -1.66
SPG11-220ENST00000559933 ERVK13-1Q9NX77 482 aa4.71□□□□□ -1.66
SPG11-220ENST00000559933 KLHL28Q9NXS3 571 aa4.71□□□□□ -1.66
SPG11-220ENST00000559933 CNIH4Q9P003 139 aa4.71□□□□□ -1.66
SPG11-220ENST00000559933 PDP1Q9P0J1 537 aaPredicted RBP4.71□□□□□ -1.66
SPG11-220ENST00000559933 STX18Q9P2W9 335 aaKnown RBP4.71□□□□□ -1.66
SPG11-220ENST00000559933 RPS6KB2Q9UBS0 482 aa4.71□□□□□ -1.66
SPG11-220ENST00000559933 SEC14L4Q9UDX3 406 aa4.71□□□□□ -1.66
SPG11-220ENST00000559933 TESQ9UGI8 421 aaKnown RBP4.71□□□□□ -1.66
SPG11-220ENST00000559933 ACAD8Q9UKU7 415 aa4.71□□□□□ -1.66
SPG11-220ENST00000559933 C15orf41Q9Y2V0 281 aa4.71□□□□□ -1.66
SPG11-220ENST00000559933 SLC6A5Q9Y345 797 aa4.71□□□□□ -1.66
SPG11-220ENST00000559933 SAMHD1Q9Y3Z3 626 aaKnown RBP4.71□□□□□ -1.66
SPG11-220ENST00000559933 A0A087WUU8 490 aa4.7□□□□□ -1.66
SPG11-220ENST00000559933 IGLV3-32A0A0A0MS00 114 aa4.7□□□□□ -1.66
SPG11-220ENST00000559933 TRAPPC13A5PLN9 417 aa4.7□□□□□ -1.66
SPG11-220ENST00000559933 ENO4A6NNW6 628 aa4.7□□□□□ -1.66
SPG11-220ENST00000559933 KDM4EB2RXH2 506 aaPredicted RBP4.7□□□□□ -1.66
SPG11-220ENST00000559933 MKRN2OSH3BPM6 223 aa4.7□□□□□ -1.66
SPG11-220ENST00000559933 M0R129 80 aa4.7□□□□□ -1.66
SPG11-220ENST00000559933 CDC42EP2O14613 210 aa4.7□□□□□ -1.66
SPG11-220ENST00000559933 HNRNPRO43390 633 aaKnown RBP4.7□□□□□ -1.66
SPG11-220ENST00000559933 ZIC3O60481 467 aa4.7□□□□□ -1.66
SPG11-220ENST00000559933 TRAPPC6AO75865 159 aa4.7□□□□□ -1.66
SPG11-220ENST00000559933 SOX30O94993 753 aa4.7□□□□□ -1.66
SPG11-220ENST00000559933 OR5F1O95221 314 aa4.7□□□□□ -1.66
SPG11-220ENST00000559933 GADD45GO95257 159 aa4.7□□□□□ -1.66
SPG11-220ENST00000559933 SOX14O95416 240 aa4.7□□□□□ -1.66
SPG11-220ENST00000559933 H1F0P07305 194 aaKnown RBP4.7□□□□□ -1.66
SPG11-220ENST00000559933 GP1BBP13224 206 aa4.7□□□□□ -1.66
SPG11-220ENST00000559933 RHCEP18577 417 aa4.7□□□□□ -1.66
SPG11-220ENST00000559933 DPP4P27487 766 aa4.7□□□□□ -1.66
SPG11-220ENST00000559933 GDF1P27539 372 aa4.7□□□□□ -1.66
SPG11-220ENST00000559933 SFTPDP35247 375 aa4.7□□□□□ -1.66
SPG11-220ENST00000559933 STARP49675 285 aa4.7□□□□□ -1.66
SPG11-220ENST00000559933 CLK3P49761 638 aaKnown RBP4.7□□□□□ -1.66
SPG11-220ENST00000559933 ZNF41P51814 821 aaPredicted RBP4.7□□□□□ -1.66
SPG11-220ENST00000559933 AQP4P55087 323 aa4.7□□□□□ -1.66
SPG11-220ENST00000559933 B3GALT5-AS1P59052 145 aa4.7□□□□□ -1.66
SPG11-220ENST00000559933 ERVFRD-1P60508 538 aa4.7□□□□□ -1.66
SPG11-220ENST00000559933 PSPHP78330 225 aa4.7□□□□□ -1.66
SPG11-220ENST00000559933 RPP38P78345 283 aaKnown RBP4.7□□□□□ -1.66
SPG11-220ENST00000559933 IL1RL1Q01638 556 aa4.7□□□□□ -1.66
SPG11-220ENST00000559933 ALDH6A1Q02252 535 aaKnown RBP4.7□□□□□ -1.66
SPG11-220ENST00000559933 LTBQ06643 244 aa4.7□□□□□ -1.66
SPG11-220ENST00000559933 CRYZQ08257 329 aaKnown RBP4.7□□□□□ -1.66
SPG11-220ENST00000559933 C17orf67Q0P5P2 114 aa4.7□□□□□ -1.66
SPG11-220ENST00000559933 SNTA1Q13424 505 aa4.7□□□□□ -1.66
SPG11-220ENST00000559933 CBFBQ13951 182 aa4.7□□□□□ -1.66
SPG11-220ENST00000559933 ZNF169Q14929 603 aaPredicted RBP4.7□□□□□ -1.66
SPG11-220ENST00000559933 ST3GAL2Q16842 350 aa4.7□□□□□ -1.66
SPG11-220ENST00000559933 ZIK1Q3SY52 487 aaPredicted RBP4.7□□□□□ -1.66
SPG11-220ENST00000559933 ANKRD39Q53RE8 183 aa4.7□□□□□ -1.66
SPG11-220ENST00000559933 ALG10BQ5I7T1 473 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms