RNA–Protein interactions for RNA: ENST00000559771.5

USP3-215, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-215ENST00000559771 ZFP28Q8NHY6 868 aa5.11□□□□□ -1.59
USP3-215ENST00000559771 PHOSPHO1Q8TCT1 267 aa5.11□□□□□ -1.59
USP3-215ENST00000559771 ZFP90Q8TF47 636 aa5.11□□□□□ -1.59
USP3-215ENST00000559771 HSD17B8Q92506 261 aa5.11□□□□□ -1.59
USP3-215ENST00000559771 KISS1RQ969F8 398 aaPredicted RBP5.11□□□□□ -1.59
USP3-215ENST00000559771 MCUR1Q96AQ8 359 aa5.11□□□□□ -1.59
USP3-215ENST00000559771 COQ8BQ96D53 544 aa5.11□□□□□ -1.59
USP3-215ENST00000559771 CMTM5Q96DZ9 223 aa5.11□□□□□ -1.59
USP3-215ENST00000559771 MTERF3Q96E29 417 aa5.11□□□□□ -1.59
USP3-215ENST00000559771 RSRC1Q96IZ7 334 aaKnown RBP5.11□□□□□ -1.59
USP3-215ENST00000559771 MRGPRX4Q96LA9 322 aa5.11□□□□□ -1.59
USP3-215ENST00000559771 SDF2Q99470 211 aa5.11□□□□□ -1.59
USP3-215ENST00000559771 QRSL1Q9H0R6 528 aaKnown RBP5.11□□□□□ -1.59
USP3-215ENST00000559771 YY1AP1Q9H869 796 aa5.11□□□□□ -1.59
USP3-215ENST00000559771 RNPEPL1Q9HAU8 725 aa5.11□□□□□ -1.59
USP3-215ENST00000559771 GP6Q9HCN6 339 aa5.11□□□□□ -1.59
USP3-215ENST00000559771 ZCCHC3Q9NUD5 404 aaKnown RBP5.11□□□□□ -1.59
USP3-215ENST00000559771 TAGLN3Q9UI15 199 aa5.11□□□□□ -1.59
USP3-215ENST00000559771 HAO1Q9UJM8 370 aa5.11□□□□□ -1.59
USP3-215ENST00000559771 B3GALT5Q9Y2C3 310 aa5.11□□□□□ -1.59
USP3-215ENST00000559771 FIS1Q9Y3D6 152 aa5.11□□□□□ -1.59
USP3-215ENST00000559771 NUP214P35658 2090 aaPredicted RBP5.11□□□□□ -1.59
USP3-215ENST00000559771 ABCA1O95477 2261 aa5.11□□□□□ -1.59
USP3-215ENST00000559771 IGHV4-30-2A0A087WSY4 118 aa5.1□□□□□ -1.59
USP3-215ENST00000559771 IGKV3D-15A0A087WSY6 115 aa5.1□□□□□ -1.59
USP3-215ENST00000559771 PRAMEF27A3QJZ7 478 aa5.1□□□□□ -1.59
USP3-215ENST00000559771 ZNF716A6NP11 495 aa5.1□□□□□ -1.59
USP3-215ENST00000559771 E7EQL1 145 aa5.1□□□□□ -1.59
USP3-215ENST00000559771 PIP5K1BO14986 540 aa5.1□□□□□ -1.59
USP3-215ENST00000559771 SCN2BO60939 215 aa5.1□□□□□ -1.59
USP3-215ENST00000559771 CRCPO75575 148 aa5.1□□□□□ -1.59
USP3-215ENST00000559771 ANP32DO95626 131 aa5.1□□□□□ -1.59
USP3-215ENST00000559771 HSPA4LO95757 839 aa5.1□□□□□ -1.59
USP3-215ENST00000559771 C6orf47O95873 294 aa5.1□□□□□ -1.59
USP3-215ENST00000559771 PABPC4LP0CB38 370 aaKnown RBP5.1□□□□□ -1.59
USP3-215ENST00000559771 ME2P23368 584 aa5.1□□□□□ -1.59
USP3-215ENST00000559771 IL32P24001 234 aa5.1□□□□□ -1.59
USP3-215ENST00000559771 IDUAP35475 653 aa5.1□□□□□ -1.59
USP3-215ENST00000559771 SLC1A6P48664 564 aa5.1□□□□□ -1.59
USP3-215ENST00000559771 CCT3P49368 545 aaKnown RBP5.1□□□□□ -1.59
USP3-215ENST00000559771 ATP12AP54707 1039 aa5.1□□□□□ -1.59
USP3-215ENST00000559771 SUMO3P55854 103 aaPredicted RBP5.1□□□□□ -1.59
USP3-215ENST00000559771 ABCE1P61221 599 aaKnown RBP5.1□□□□□ -1.59
USP3-215ENST00000559771 RPS26P62854 115 aaKnown RBP5.1□□□□□ -1.59
USP3-215ENST00000559771 HBA1P69905 142 aa5.1□□□□□ -1.59
USP3-215ENST00000559771 IRX1P78414 480 aaPredicted RBP5.1□□□□□ -1.59
USP3-215ENST00000559771 SPOCK1Q08629 439 aa5.1□□□□□ -1.59
USP3-215ENST00000559771 FUT5Q11128 374 aa5.1□□□□□ -1.59
USP3-215ENST00000559771 FAPQ12884 760 aa5.1□□□□□ -1.59
USP3-215ENST00000559771 SELENBP1Q13228 472 aa5.1□□□□□ -1.59
USP3-215ENST00000559771 QPRTQ15274 297 aa5.1□□□□□ -1.59
USP3-215ENST00000559771 ETFDHQ16134 617 aa5.1□□□□□ -1.59
USP3-215ENST00000559771 MAPK14Q16539 360 aa5.1□□□□□ -1.59
USP3-215ENST00000559771 TRMT5Q32P41 509 aaKnown RBP5.1□□□□□ -1.59
USP3-215ENST00000559771 ARL13AQ5H913 290 aaPredicted RBP5.1□□□□□ -1.59
USP3-215ENST00000559771 CFAP157Q5JU67 520 aa5.1□□□□□ -1.59
USP3-215ENST00000559771 TMEM201Q5SNT2 666 aa5.1□□□□□ -1.59
USP3-215ENST00000559771 C6orf136Q5SQH8 315 aa5.1□□□□□ -1.59
USP3-215ENST00000559771 PDSS1Q5T2R2 415 aa5.1□□□□□ -1.59
USP3-215ENST00000559771 PDZK1Q5T2W1 519 aa5.1□□□□□ -1.59
USP3-215ENST00000559771 AP1ARQ63HQ0 302 aa5.1□□□□□ -1.59
USP3-215ENST00000559771 GTF2IRD2BQ6EKJ0 949 aa5.1□□□□□ -1.59
USP3-215ENST00000559771 ABLIM2Q6H8Q1 611 aa5.1□□□□□ -1.59
USP3-215ENST00000559771 HMBOX1Q6NT76 420 aa5.1□□□□□ -1.59
USP3-215ENST00000559771 BHLHA15Q7RTS1 189 aaPredicted RBP5.1□□□□□ -1.59
USP3-215ENST00000559771 SZRD1Q7Z422 152 aa5.1□□□□□ -1.59
USP3-215ENST00000559771 NET1Q7Z628 596 aaPredicted RBP5.1□□□□□ -1.59
USP3-215ENST00000559771 GTF2IRD2Q86UP8 949 aa5.1□□□□□ -1.59
USP3-215ENST00000559771 CLEC4FQ8N1N0 589 aa5.1□□□□□ -1.59
USP3-215ENST00000559771 ZNF433Q8N7K0 673 aaPredicted RBP5.1□□□□□ -1.59
USP3-215ENST00000559771 ZNF527Q8NB42 609 aa5.1□□□□□ -1.59
USP3-215ENST00000559771 FAM71CQ8NEG0 241 aa5.1□□□□□ -1.59
USP3-215ENST00000559771 ATP6V1C2Q8NEY4 427 aa5.1□□□□□ -1.59
USP3-215ENST00000559771 OR5W2Q8NH69 310 aa5.1□□□□□ -1.59
USP3-215ENST00000559771 RFWD2Q8NHY2 731 aa5.1□□□□□ -1.59
USP3-215ENST00000559771 TWIST2Q8WVJ9 160 aa5.1□□□□□ -1.59
USP3-215ENST00000559771 JADE3Q92613 823 aa5.1□□□□□ -1.59
USP3-215ENST00000559771 HTRA1Q92743 480 aa5.1□□□□□ -1.59
USP3-215ENST00000559771 OR7D2Q96RA2 312 aa5.1□□□□□ -1.59
USP3-215ENST00000559771 C1orf50Q9BV19 199 aa5.1□□□□□ -1.59
USP3-215ENST00000559771 MECRQ9BV79 373 aa5.1□□□□□ -1.59
USP3-215ENST00000559771 ACTRT3Q9BYD9 372 aa5.1□□□□□ -1.59
USP3-215ENST00000559771 POTEKPQ9BYX7 375 aa5.1□□□□□ -1.59
USP3-215ENST00000559771 ESRP2Q9H6T0 727 aaKnown RBP5.1□□□□□ -1.59
USP3-215ENST00000559771 HHATLQ9HCP6 504 aa5.1□□□□□ -1.59
USP3-215ENST00000559771 NDE1Q9NXR1 346 aa5.1□□□□□ -1.59
USP3-215ENST00000559771 CISD1Q9NZ45 108 aaKnown RBP5.1□□□□□ -1.59
USP3-215ENST00000559771 TMED5Q9Y3A6 229 aa5.1□□□□□ -1.59
USP3-215ENST00000559771 DTNAQ9Y4J8 743 aa5.1□□□□□ -1.59
USP3-215ENST00000559771 TRAF6Q9Y4K3 522 aa5.1□□□□□ -1.59
USP3-215ENST00000559771 LRRC42Q9Y546 428 aa5.1□□□□□ -1.59
USP3-215ENST00000559771 A0A1W2PP18 115 aa5.09□□□□□ -1.59
USP3-215ENST00000559771 SERINC4A6NH21 518 aa5.09□□□□□ -1.59
USP3-215ENST00000559771 GJE1A6NN92 205 aa5.09□□□□□ -1.59
USP3-215ENST00000559771 ZNF724A8MTY0 619 aa5.09□□□□□ -1.59
USP3-215ENST00000559771 PDLIM1O00151 329 aa5.09□□□□□ -1.59
USP3-215ENST00000559771 ABCD4O14678 606 aa5.09□□□□□ -1.59
USP3-215ENST00000559771 ZNF264O43296 627 aa5.09□□□□□ -1.59
USP3-215ENST00000559771 TLX2O43763 284 aaPredicted RBP5.09□□□□□ -1.59
USP3-215ENST00000559771 NPHS1O60500 1241 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms