RNA–Protein interactions for RNA: ENST00000559108.1

TPM1-217, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-217ENST00000559108 GCKP35557 465 aa9.73□□□□□ -0.85
TPM1-217ENST00000559108 MAGEA2P43356 314 aa9.73□□□□□ -0.85
TPM1-217ENST00000559108 RPS5P46782 204 aaKnown RBP9.73□□□□□ -0.85
TPM1-217ENST00000559108 H3F3AP84243 136 aa9.73□□□□□ -0.85
TPM1-217ENST00000559108 KCNC4Q03721 635 aa9.73□□□□□ -0.85
TPM1-217ENST00000559108 TRAP1Q12931 704 aaKnown RBP9.73□□□□□ -0.85
TPM1-217ENST00000559108 SEC23BQ15437 767 aa9.73□□□□□ -0.85
TPM1-217ENST00000559108 ELOA3BQ3SY89 546 aa9.73□□□□□ -0.85
TPM1-217ENST00000559108 C1orf140Q5VVS0 124 aa9.73□□□□□ -0.85
TPM1-217ENST00000559108 TBPL2Q6SJ96 375 aa9.73□□□□□ -0.85
TPM1-217ENST00000559108 CCDC121Q6ZUS5 278 aa9.73□□□□□ -0.85
TPM1-217ENST00000559108 FKBP9P1Q75LS8 142 aa9.73□□□□□ -0.85
TPM1-217ENST00000559108 SLC46A3Q7Z3Q1 461 aa9.73□□□□□ -0.85
TPM1-217ENST00000559108 CCDC103Q8IW40 242 aa9.73□□□□□ -0.85
TPM1-217ENST00000559108 OFCC1Q8IZS5 231 aa9.73□□□□□ -0.85
TPM1-217ENST00000559108 EID3Q8N140 333 aa9.73□□□□□ -0.85
TPM1-217ENST00000559108 LRRC17Q8N6Y2 441 aa9.73□□□□□ -0.85
TPM1-217ENST00000559108 PIK3C3Q8NEB9 887 aa9.73□□□□□ -0.85
TPM1-217ENST00000559108 ELOA3Q8NG57 546 aa9.73□□□□□ -0.85
TPM1-217ENST00000559108 RNF128Q8TEB7 428 aa9.73□□□□□ -0.85
TPM1-217ENST00000559108 SLC25A43Q8WUT9 341 aaPredicted RBP9.73□□□□□ -0.85
TPM1-217ENST00000559108 DNAJA4Q8WW22 397 aaPredicted RBP9.73□□□□□ -0.85
TPM1-217ENST00000559108 LZICQ8WZA0 190 aa9.73□□□□□ -0.85
TPM1-217ENST00000559108 DTNBP1Q96EV8 351 aa9.73□□□□□ -0.85
TPM1-217ENST00000559108 SLC47A1Q96FL8 570 aa9.73□□□□□ -0.85
TPM1-217ENST00000559108 DHRS1Q96LJ7 313 aa9.73□□□□□ -0.85
TPM1-217ENST00000559108 MUC13Q9H3R2 512 aa9.73□□□□□ -0.85
TPM1-217ENST00000559108 RNF122Q9H9V4 155 aa9.73□□□□□ -0.85
TPM1-217ENST00000559108 C12orf10Q9HB07 376 aa9.73□□□□□ -0.85
TPM1-217ENST00000559108 TMEM27Q9HBJ8 222 aa9.73□□□□□ -0.85
TPM1-217ENST00000559108 SAMD4AQ9UPU9 718 aaKnown RBP9.73□□□□□ -0.85
TPM1-217ENST00000559108 RNF6Q9Y252 685 aa9.73□□□□□ -0.85
TPM1-217ENST00000559108 LRRK2Q5S007 2527 aa9.73□□□□□ -0.85
TPM1-217ENST00000559108 TRBV4-1A0A0J9YWV2 114 aa9.72□□□□□ -0.85
TPM1-217ENST00000559108 A0A1B0GUH1 482 aa9.72□□□□□ -0.85
TPM1-217ENST00000559108 A8MVM7 634 aa9.72□□□□□ -0.85
TPM1-217ENST00000559108 SULT2B1O00204 365 aa9.72□□□□□ -0.85
TPM1-217ENST00000559108 ATP5HO75947 161 aa9.72□□□□□ -0.85
TPM1-217ENST00000559108 AKR7A3O95154 331 aa9.72□□□□□ -0.85
TPM1-217ENST00000559108 PMS2P2O95744 297 aa9.72□□□□□ -0.85
TPM1-217ENST00000559108 HPRP00739 348 aa9.72□□□□□ -0.85
TPM1-217ENST00000559108 FPR1P21462 350 aa9.72□□□□□ -0.85
TPM1-217ENST00000559108 SLC7A1P30825 629 aa9.72□□□□□ -0.85
TPM1-217ENST00000559108 CARD18P57730 90 aa9.72□□□□□ -0.85
TPM1-217ENST00000559108 TAS2R41P59536 307 aa9.72□□□□□ -0.85
TPM1-217ENST00000559108 GABPB1Q06547 395 aaPredicted RBP9.72□□□□□ -0.85
TPM1-217ENST00000559108 PPP1R8Q12972 351 aaKnown RBP9.72□□□□□ -0.85
TPM1-217ENST00000559108 FLOT2Q14254 428 aa9.72□□□□□ -0.85
TPM1-217ENST00000559108 OR7A5Q15622 319 aa9.72□□□□□ -0.85
TPM1-217ENST00000559108 SWT1Q5T5J6 900 aaKnown RBP9.72□□□□□ -0.85
TPM1-217ENST00000559108 ABLIM2Q6H8Q1 611 aa9.72□□□□□ -0.85
TPM1-217ENST00000559108 VWA1Q6PCB0 445 aa9.72□□□□□ -0.85
TPM1-217ENST00000559108 TMEM99Q8N816 258 aa9.72□□□□□ -0.85
TPM1-217ENST00000559108 RNF217Q8TC41 542 aa9.72□□□□□ -0.85
TPM1-217ENST00000559108 CANT1Q8WVQ1 401 aa9.72□□□□□ -0.85
TPM1-217ENST00000559108 WNT2BQ93097 391 aa9.72□□□□□ -0.85
TPM1-217ENST00000559108 INTS12Q96CB8 462 aaKnown RBP9.72□□□□□ -0.85
TPM1-217ENST00000559108 POTEKPQ9BYX7 375 aa9.72□□□□□ -0.85
TPM1-217ENST00000559108 UCK2Q9BZX2 261 aa9.72□□□□□ -0.85
TPM1-217ENST00000559108 EVA1AQ9H8M9 152 aa9.72□□□□□ -0.85
TPM1-217ENST00000559108 CALHM2Q9HA72 323 aa9.72□□□□□ -0.85
TPM1-217ENST00000559108 NMNAT1Q9HAN9 279 aaPredicted RBP9.72□□□□□ -0.85
TPM1-217ENST00000559108 SERINC1Q9NRX5 453 aa9.72□□□□□ -0.85
TPM1-217ENST00000559108 KLHL13Q9P2N7 655 aa9.72□□□□□ -0.85
TPM1-217ENST00000559108 RPS6KB2Q9UBS0 482 aa9.72□□□□□ -0.85
TPM1-217ENST00000559108 HDGFL3Q9Y3E1 203 aa9.72□□□□□ -0.85
TPM1-217ENST00000559108 ZNF175Q9Y473 711 aa9.72□□□□□ -0.85
TPM1-217ENST00000559108 TESMINQ9Y4I5 508 aa9.72□□□□□ -0.85
TPM1-217ENST00000559108 DOPEY2Q9Y3R5 2298 aa9.72□□□□□ -0.85
TPM1-217ENST00000559108 A0A087WUU8 490 aa9.71□□□□□ -0.86
TPM1-217ENST00000559108 ANKRD65E5RJM6 399 aa9.71□□□□□ -0.86
TPM1-217ENST00000559108 RCBTB2O95199 551 aa9.71□□□□□ -0.86
TPM1-217ENST00000559108 PNMTP11086 282 aa9.71□□□□□ -0.86
TPM1-217ENST00000559108 GRPRP30550 384 aa9.71□□□□□ -0.86
TPM1-217ENST00000559108 PTGER4P35408 488 aa9.71□□□□□ -0.86
TPM1-217ENST00000559108 IDUAP35475 653 aa9.71□□□□□ -0.86
TPM1-217ENST00000559108 TIMP3P35625 211 aa9.71□□□□□ -0.86
TPM1-217ENST00000559108 KIR2DL2P43627 348 aaPredicted RBP9.71□□□□□ -0.86
TPM1-217ENST00000559108 LIMS1P48059 325 aa9.71□□□□□ -0.86
TPM1-217ENST00000559108 CLK1P49759 484 aaKnown RBP9.71□□□□□ -0.86
TPM1-217ENST00000559108 OR2B6P58173 313 aa9.71□□□□□ -0.86
TPM1-217ENST00000559108 RAC3P60763 192 aa9.71□□□□□ -0.86
TPM1-217ENST00000559108 SIRPAP78324 504 aa9.71□□□□□ -0.86
TPM1-217ENST00000559108 FHL1Q13642 323 aa9.71□□□□□ -0.86
TPM1-217ENST00000559108 SGCBQ16585 318 aa9.71□□□□□ -0.86
TPM1-217ENST00000559108 RIPPLY2Q5TAB7 128 aa9.71□□□□□ -0.86
TPM1-217ENST00000559108 PPP4R4Q6NUP7 873 aa9.71□□□□□ -0.86
TPM1-217ENST00000559108 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.71□□□□□ -0.86
TPM1-217ENST00000559108 PIWIL3Q7Z3Z3 882 aaKnown RBP9.71□□□□□ -0.86
TPM1-217ENST00000559108 NUFIP2Q7Z417 695 aaKnown RBP9.71□□□□□ -0.86
TPM1-217ENST00000559108 ZDHHC21Q8IVQ6 265 aa9.71□□□□□ -0.86
TPM1-217ENST00000559108 KDM8Q8N371 416 aa9.71□□□□□ -0.86
TPM1-217ENST00000559108 SLC7A13Q8TCU3 470 aa9.71□□□□□ -0.86
TPM1-217ENST00000559108 STK35Q8TDR2 534 aa9.71□□□□□ -0.86
TPM1-217ENST00000559108 MCUR1Q96AQ8 359 aa9.71□□□□□ -0.86
TPM1-217ENST00000559108 ZNF775Q96BV0 537 aaPredicted RBP9.71□□□□□ -0.86
TPM1-217ENST00000559108 SDCCAG3Q96C92 435 aa9.71□□□□□ -0.86
TPM1-217ENST00000559108 DDIT4LQ96D03 193 aa9.71□□□□□ -0.86
TPM1-217ENST00000559108 PIP5K1AQ99755 562 aa9.71□□□□□ -0.86
TPM1-217ENST00000559108 GPA33Q99795 319 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms