RNA–Protein interactions for RNA: ENST00000558827.1

SMAD3-208, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-208ENST00000558827 LGALS3BPQ08380 585 aa11.05□□□□□ -0.64
SMAD3-208ENST00000558827 P2RY6Q15077 328 aa11.05□□□□□ -0.64
SMAD3-208ENST00000558827 Q5PR19 223 aa11.05□□□□□ -0.64
SMAD3-208ENST00000558827 LRIF1Q5T3J3 769 aa11.05□□□□□ -0.64
SMAD3-208ENST00000558827 WBP2NLQ6ICG8 309 aa11.05□□□□□ -0.64
SMAD3-208ENST00000558827 ADAM5Q6NVV9 412 aa11.05□□□□□ -0.64
SMAD3-208ENST00000558827 Q6ZT83 130 aa11.05□□□□□ -0.64
SMAD3-208ENST00000558827 GPAT4Q86UL3 456 aa11.05□□□□□ -0.64
SMAD3-208ENST00000558827 ZNF433Q8N7K0 673 aaPredicted RBP11.05□□□□□ -0.64
SMAD3-208ENST00000558827 KBTBD8Q8NFY9 601 aa11.05□□□□□ -0.64
SMAD3-208ENST00000558827 OR52N5Q8NH56 324 aa11.05□□□□□ -0.64
SMAD3-208ENST00000558827 LILRB1Q8NHL6 650 aaPredicted RBP11.05□□□□□ -0.64
SMAD3-208ENST00000558827 BBS10Q8TAM1 723 aa11.05□□□□□ -0.64
SMAD3-208ENST00000558827 PMM1Q92871 262 aa11.05□□□□□ -0.64
SMAD3-208ENST00000558827 C3orf49Q96BT1 292 aa11.05□□□□□ -0.64
SMAD3-208ENST00000558827 WFDC6Q9BQY6 131 aa11.05□□□□□ -0.64
SMAD3-208ENST00000558827 RAD21L1Q9H4I0 556 aa11.05□□□□□ -0.64
SMAD3-208ENST00000558827 PIF1Q9H611 641 aa11.05□□□□□ -0.64
SMAD3-208ENST00000558827 VIPAS39Q9H9C1 493 aa11.05□□□□□ -0.64
SMAD3-208ENST00000558827 TRAPPC4Q9Y296 219 aa11.05□□□□□ -0.64
SMAD3-208ENST00000558827 ZFHX3Q15911 3703 aa11.05□□□□□ -0.64
SMAD3-208ENST00000558827 HEATR1Q9H583 2144 aaKnown RBP11.05□□□□□ -0.64
SMAD3-208ENST00000558827 IGKV3D-15A0A087WSY6 115 aa11.04□□□□□ -0.64
SMAD3-208ENST00000558827 LIPT2A6NK58 231 aa11.04□□□□□ -0.64
SMAD3-208ENST00000558827 SMAD7O15105 426 aaKnown RBP11.04□□□□□ -0.64
SMAD3-208ENST00000558827 ZNF208O43345 1280 aa11.04□□□□□ -0.64
SMAD3-208ENST00000558827 EDF1O60869 148 aaKnown RBP11.04□□□□□ -0.64
SMAD3-208ENST00000558827 CD3EP07766 207 aa11.04□□□□□ -0.64
SMAD3-208ENST00000558827 THBS1P07996 1170 aa11.04□□□□□ -0.64
SMAD3-208ENST00000558827 GGT1P19440 569 aa11.04□□□□□ -0.64
SMAD3-208ENST00000558827 MRPL19P49406 292 aaKnown RBP11.04□□□□□ -0.64
SMAD3-208ENST00000558827 CLK1P49759 484 aaKnown RBP11.04□□□□□ -0.64
SMAD3-208ENST00000558827 ATP4BP51164 291 aa11.04□□□□□ -0.64
SMAD3-208ENST00000558827 ZNF83P51522 516 aa11.04□□□□□ -0.64
SMAD3-208ENST00000558827 NR1H2P55055 460 aa11.04□□□□□ -0.64
SMAD3-208ENST00000558827 MTPNP58546 118 aa11.04□□□□□ -0.64
SMAD3-208ENST00000558827 BSPH1Q075Z2 132 aa11.04□□□□□ -0.64
SMAD3-208ENST00000558827 FADDQ13158 208 aa11.04□□□□□ -0.64
SMAD3-208ENST00000558827 SCARB2Q14108 478 aa11.04□□□□□ -0.64
SMAD3-208ENST00000558827 PPA1Q15181 289 aa11.04□□□□□ -0.64
SMAD3-208ENST00000558827 NCMAPQ5T1S8 102 aa11.04□□□□□ -0.64
SMAD3-208ENST00000558827 RNF220Q5VTB9 566 aa11.04□□□□□ -0.64
SMAD3-208ENST00000558827 FBXW9Q5XUX1 488 aa11.04□□□□□ -0.64
SMAD3-208ENST00000558827 DLEU7Q6UYE1 221 aa11.04□□□□□ -0.64
SMAD3-208ENST00000558827 RETREG3Q86VR2 466 aa11.04□□□□□ -0.64
SMAD3-208ENST00000558827 HSD17B8Q92506 261 aa11.04□□□□□ -0.64
SMAD3-208ENST00000558827 PIGTQ969N2 578 aa11.04□□□□□ -0.64
SMAD3-208ENST00000558827 Q96MF0 132 aa11.04□□□□□ -0.64
SMAD3-208ENST00000558827 ZNF385AQ96PM9 386 aaKnown RBP11.04□□□□□ -0.64
SMAD3-208ENST00000558827 CPPED1Q9BRF8 314 aaPredicted RBP11.04□□□□□ -0.64
SMAD3-208ENST00000558827 BCL2L10Q9HD36 194 aa11.04□□□□□ -0.64
SMAD3-208ENST00000558827 SLC7A10Q9NS82 523 aa11.04□□□□□ -0.64
SMAD3-208ENST00000558827 NPAP1Q9NZP6 1156 aa11.04□□□□□ -0.64
SMAD3-208ENST00000558827 UPB1Q9UBR1 384 aa11.04□□□□□ -0.64
SMAD3-208ENST00000558827 RPS6KB2Q9UBS0 482 aa11.04□□□□□ -0.64
SMAD3-208ENST00000558827 SEC14L4Q9UDX3 406 aa11.04□□□□□ -0.64
SMAD3-208ENST00000558827 LAMP3Q9UQV4 416 aa11.04□□□□□ -0.64
SMAD3-208ENST00000558827 IFT52Q9Y366 437 aa11.04□□□□□ -0.64
SMAD3-208ENST00000558827 RNF115Q9Y4L5 304 aa11.04□□□□□ -0.64
SMAD3-208ENST00000558827 FLVCR1Q9Y5Y0 555 aa11.04□□□□□ -0.64
SMAD3-208ENST00000558827 NAV3Q8IVL0 2385 aa11.04□□□□□ -0.64
SMAD3-208ENST00000558827 RAI1Q7Z5J4 1906 aaPredicted RBP11.03□□□□□ -0.64
SMAD3-208ENST00000558827 TRBV5-3A0A0A0MS03 114 aa11.03□□□□□ -0.64
SMAD3-208ENST00000558827 A0A1W2PP18 115 aa11.03□□□□□ -0.64
SMAD3-208ENST00000558827 ELOA3DA6NLF2 546 aaPredicted RBP11.03□□□□□ -0.64
SMAD3-208ENST00000558827 A8MVM7 634 aa11.03□□□□□ -0.64
SMAD3-208ENST00000558827 EVPLLA8MZ36 301 aa11.03□□□□□ -0.64
SMAD3-208ENST00000558827 FAAHO00519 579 aa11.03□□□□□ -0.64
SMAD3-208ENST00000558827 GPR171O14626 319 aa11.03□□□□□ -0.64
SMAD3-208ENST00000558827 HS3ST1O14792 307 aa11.03□□□□□ -0.64
SMAD3-208ENST00000558827 OPN1SWP03999 348 aa11.03□□□□□ -0.64
SMAD3-208ENST00000558827 GPIP06744 558 aa11.03□□□□□ -0.64
SMAD3-208ENST00000558827 BMP2P12643 396 aa11.03□□□□□ -0.64
SMAD3-208ENST00000558827 HTR2AP28223 471 aa11.03□□□□□ -0.64
SMAD3-208ENST00000558827 RPS5P46782 204 aaKnown RBP11.03□□□□□ -0.64
SMAD3-208ENST00000558827 H3F3AP84243 136 aa11.03□□□□□ -0.64
SMAD3-208ENST00000558827 SLC17A1Q14916 467 aa11.03□□□□□ -0.64
SMAD3-208ENST00000558827 PDK3Q15120 406 aa11.03□□□□□ -0.64
SMAD3-208ENST00000558827 ADRM1Q16186 407 aa11.03□□□□□ -0.64
SMAD3-208ENST00000558827 ELOA3BQ3SY89 546 aa11.03□□□□□ -0.64
SMAD3-208ENST00000558827 RUNDC3AQ59EK9 446 aa11.03□□□□□ -0.64
SMAD3-208ENST00000558827 TSPO2Q5TGU0 170 aa11.03□□□□□ -0.64
SMAD3-208ENST00000558827 C1orf140Q5VVS0 124 aa11.03□□□□□ -0.64
SMAD3-208ENST00000558827 TMEM225Q6GV28 225 aa11.03□□□□□ -0.64
SMAD3-208ENST00000558827 REEP3Q6NUK4 255 aa11.03□□□□□ -0.64
SMAD3-208ENST00000558827 SEZ6L2Q6UXD5 910 aa11.03□□□□□ -0.64
SMAD3-208ENST00000558827 C20orf204Q6ZNR8 217 aa11.03□□□□□ -0.64
SMAD3-208ENST00000558827 AAED1Q7RTV5 226 aa11.03□□□□□ -0.64
SMAD3-208ENST00000558827 YTHDF3Q7Z739 585 aaKnown RBP11.03□□□□□ -0.64
SMAD3-208ENST00000558827 DHDDSQ86SQ9 333 aa11.03□□□□□ -0.64
SMAD3-208ENST00000558827 CIARTQ8N365 385 aaPredicted RBP11.03□□□□□ -0.64
SMAD3-208ENST00000558827 ZIC4Q8N9L1 334 aa11.03□□□□□ -0.64
SMAD3-208ENST00000558827 SMYD1Q8NB12 490 aa11.03□□□□□ -0.64
SMAD3-208ENST00000558827 ELOA3Q8NG57 546 aa11.03□□□□□ -0.64
SMAD3-208ENST00000558827 OR9K2Q8NGE7 335 aa11.03□□□□□ -0.64
SMAD3-208ENST00000558827 MUCL1Q96DR8 90 aa11.03□□□□□ -0.64
SMAD3-208ENST00000558827 KTI12Q96EK9 354 aaPredicted RBP11.03□□□□□ -0.64
SMAD3-208ENST00000558827 TMEM204Q9BSN7 226 aa11.03□□□□□ -0.64
SMAD3-208ENST00000558827 TAPBPLQ9BX59 468 aa11.03□□□□□ -0.64
SMAD3-208ENST00000558827 TMEM120AQ9BXJ8 343 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 147.1 ms