RNA–Protein interactions for RNA: ENST00000558561.1

SPG11-211, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-211ENST00000558561 FAM110BQ8TC76 370 aa3.82□□□□□ -1.8
SPG11-211ENST00000558561 ZNF675Q8TD23 568 aa3.82□□□□□ -1.8
SPG11-211ENST00000558561 TUBGCP3Q96CW5 907 aa3.82□□□□□ -1.8
SPG11-211ENST00000558561 COQ8BQ96D53 544 aa3.82□□□□□ -1.8
SPG11-211ENST00000558561 FAM120BQ96EK7 910 aaKnown RBP3.82□□□□□ -1.8
SPG11-211ENST00000558561 DNAJA3Q96EY1 480 aa3.82□□□□□ -1.8
SPG11-211ENST00000558561 RILPQ96NA2 401 aa3.82□□□□□ -1.8
SPG11-211ENST00000558561 FAM173AQ9BQD7 235 aa3.82□□□□□ -1.8
SPG11-211ENST00000558561 FAIM2Q9BWQ8 316 aa3.82□□□□□ -1.8
SPG11-211ENST00000558561 IQCGQ9H095 443 aaKnown RBP3.82□□□□□ -1.8
SPG11-211ENST00000558561 UBQLN3Q9H347 655 aa3.82□□□□□ -1.8
SPG11-211ENST00000558561 IL1RL2Q9HB29 575 aa3.82□□□□□ -1.8
SPG11-211ENST00000558561 NMRK1Q9NWW6 199 aa3.82□□□□□ -1.8
SPG11-211ENST00000558561 GIN1Q9NXP7 522 aa3.82□□□□□ -1.8
SPG11-211ENST00000558561 COPS7AQ9UBW8 275 aa3.82□□□□□ -1.8
SPG11-211ENST00000558561 ATP6V1HQ9UI12 483 aa3.82□□□□□ -1.8
SPG11-211ENST00000558561 PSME2Q9UL46 239 aa3.82□□□□□ -1.8
SPG11-211ENST00000558561 RNF6Q9Y252 685 aa3.82□□□□□ -1.8
SPG11-211ENST00000558561 RPH3AQ9Y2J0 694 aaPredicted RBP3.82□□□□□ -1.8
SPG11-211ENST00000558561 KLF13Q9Y2Y9 288 aaPredicted RBP3.82□□□□□ -1.8
SPG11-211ENST00000558561 MEMO1Q9Y316 297 aa3.82□□□□□ -1.8
SPG11-211ENST00000558561 RAP2CQ9Y3L5 183 aa3.82□□□□□ -1.8
SPG11-211ENST00000558561 SIRT4Q9Y6E7 314 aaPredicted RBP3.82□□□□□ -1.8
SPG11-211ENST00000558561 NAV2Q8IVL1 2488 aa3.82□□□□□ -1.8
SPG11-211ENST00000558561 ALPK2Q86TB3 2170 aa3.82□□□□□ -1.8
SPG11-211ENST00000558561 PDZD2O15018 2839 aa3.81□□□□□ -1.8
SPG11-211ENST00000558561 DOPEY1Q5JWR5 2465 aa3.81□□□□□ -1.8
SPG11-211ENST00000558561 AKAP6Q13023 2319 aa3.81□□□□□ -1.8
SPG11-211ENST00000558561 TRGV5A0A0B4J1U4 118 aa3.81□□□□□ -1.8
SPG11-211ENST00000558561 A0A1B0GVC2 190 aa3.81□□□□□ -1.8
SPG11-211ENST00000558561 A0A1W2PRB8 838 aa3.81□□□□□ -1.8
SPG11-211ENST00000558561 GOLGA6L10A6NI86 522 aa3.81□□□□□ -1.8
SPG11-211ENST00000558561 AGAP5A6NIR3 686 aa3.81□□□□□ -1.8
SPG11-211ENST00000558561 CLDN24A6NM45 220 aa3.81□□□□□ -1.8
SPG11-211ENST00000558561 OR6C76A6NM76 312 aa3.81□□□□□ -1.8
SPG11-211ENST00000558561 SCAMP2O15127 329 aaKnown RBP3.81□□□□□ -1.8
SPG11-211ENST00000558561 TPD52L2O43399 206 aaKnown RBP3.81□□□□□ -1.8
SPG11-211ENST00000558561 TBX19O60806 448 aa3.81□□□□□ -1.8
SPG11-211ENST00000558561 GUCY1B2O75343 617 aa3.81□□□□□ -1.8
SPG11-211ENST00000558561 KCNK2O95069 426 aa3.81□□□□□ -1.8
SPG11-211ENST00000558561 NKX2-2O95096 273 aa3.81□□□□□ -1.8
SPG11-211ENST00000558561 UTS2O95399 124 aa3.81□□□□□ -1.8
SPG11-211ENST00000558561 IGHG3P01860 377 aa3.81□□□□□ -1.8
SPG11-211ENST00000558561 HMGN2P05204 90 aaKnown RBP3.81□□□□□ -1.8
SPG11-211ENST00000558561 MYZAPP0CAP1 466 aa3.81□□□□□ -1.8
SPG11-211ENST00000558561 PRPS2P11908 318 aa3.81□□□□□ -1.8
SPG11-211ENST00000558561 NEFHP12036 1026 aa3.81□□□□□ -1.8
SPG11-211ENST00000558561 GP1BBP13224 206 aa3.81□□□□□ -1.8
SPG11-211ENST00000558561 ABOP16442 354 aa3.81□□□□□ -1.8
SPG11-211ENST00000558561 DDX5P17844 614 aaKnown RBP3.81□□□□□ -1.8
SPG11-211ENST00000558561 KLK2P20151 261 aa3.81□□□□□ -1.8
SPG11-211ENST00000558561 SHC1P29353 583 aa3.81□□□□□ -1.8
SPG11-211ENST00000558561 MPIP34949 423 aa3.81□□□□□ -1.8
SPG11-211ENST00000558561 CCT3P49368 545 aaKnown RBP3.81□□□□□ -1.8
SPG11-211ENST00000558561 KCNJ2P63252 427 aa3.81□□□□□ -1.8
SPG11-211ENST00000558561 SRYQ05066 204 aa3.81□□□□□ -1.8
SPG11-211ENST00000558561 CRYZQ08257 329 aaKnown RBP3.81□□□□□ -1.8
SPG11-211ENST00000558561 PLCXD2Q0VAA5 305 aa3.81□□□□□ -1.8
SPG11-211ENST00000558561 STX5Q13190 355 aa3.81□□□□□ -1.8
SPG11-211ENST00000558561 LASP1Q14847 261 aaKnown RBP3.81□□□□□ -1.8
SPG11-211ENST00000558561 DAZAP2Q15038 168 aaPredicted RBP3.81□□□□□ -1.8
SPG11-211ENST00000558561 RPS6KA2Q15349 733 aa3.81□□□□□ -1.8
SPG11-211ENST00000558561 CD226Q15762 336 aa3.81□□□□□ -1.8
SPG11-211ENST00000558561 MAPK14Q16539 360 aa3.81□□□□□ -1.8
SPG11-211ENST00000558561 SRSF7Q16629 238 aaKnown RBP eCLIP3.81□□□□□ -1.8
SPG11-211ENST00000558561 HYAL4Q2M3T9 481 aa3.81□□□□□ -1.8
SPG11-211ENST00000558561 SPANXN4Q5MJ08 99 aa3.81□□□□□ -1.8
SPG11-211ENST00000558561 DDX59Q5T1V6 619 aaKnown RBP eCLIP3.81□□□□□ -1.8
SPG11-211ENST00000558561 CPTPQ5TA50 214 aa3.81□□□□□ -1.8
SPG11-211ENST00000558561 AGBL2Q5U5Z8 902 aa3.81□□□□□ -1.8
SPG11-211ENST00000558561 SLC2A7Q6PXP3 512 aa3.81□□□□□ -1.8
SPG11-211ENST00000558561 CBLN3Q6UW01 205 aa3.81□□□□□ -1.8
SPG11-211ENST00000558561 ARSKQ6UWY0 536 aa3.81□□□□□ -1.8
SPG11-211ENST00000558561 C6orf120Q7Z4R8 191 aa3.81□□□□□ -1.8
SPG11-211ENST00000558561 FUNDC1Q8IVP5 155 aa3.81□□□□□ -1.8
SPG11-211ENST00000558561 FAM9CQ8IZT9 166 aa3.81□□□□□ -1.8
SPG11-211ENST00000558561 SLC34A3Q8N130 599 aa3.81□□□□□ -1.8
SPG11-211ENST00000558561 GHDCQ8N2G8 530 aa3.81□□□□□ -1.8
SPG11-211ENST00000558561 HORMAD2Q8N7B1 307 aa3.81□□□□□ -1.8
SPG11-211ENST00000558561 FNDC5Q8NAU1 212 aa3.81□□□□□ -1.8
SPG11-211ENST00000558561 FAM83FQ8NEG4 500 aaPredicted RBP3.81□□□□□ -1.8
SPG11-211ENST00000558561 OR2M3Q8NG83 312 aa3.81□□□□□ -1.8
SPG11-211ENST00000558561 RFWD2Q8NHY2 731 aa3.81□□□□□ -1.8
SPG11-211ENST00000558561 FAM76AQ8TAV0 307 aa3.81□□□□□ -1.8
SPG11-211ENST00000558561 SLC22A8Q8TCC7 542 aa3.81□□□□□ -1.8
SPG11-211ENST00000558561 RNF138Q8WVD3 245 aa3.81□□□□□ -1.8
SPG11-211ENST00000558561 NRGNQ92686 78 aa3.81□□□□□ -1.8
SPG11-211ENST00000558561 CDS1Q92903 461 aa3.81□□□□□ -1.8
SPG11-211ENST00000558561 RAB8BQ92930 207 aa3.81□□□□□ -1.8
SPG11-211ENST00000558561 C3orf49Q96BT1 292 aa3.81□□□□□ -1.8
SPG11-211ENST00000558561 SDCCAG3Q96C92 435 aa3.81□□□□□ -1.8
SPG11-211ENST00000558561 PPCDCQ96CD2 204 aa3.81□□□□□ -1.8
SPG11-211ENST00000558561 RMND5BQ96G75 393 aaPredicted RBP3.81□□□□□ -1.8
SPG11-211ENST00000558561 ZNF845Q96IR2 970 aaPredicted RBP3.81□□□□□ -1.8
SPG11-211ENST00000558561 ATP6V1G3Q96LB4 118 aa3.81□□□□□ -1.8
SPG11-211ENST00000558561 COL21A1Q96P44 957 aa3.81□□□□□ -1.8
SPG11-211ENST00000558561 BTBD9Q96Q07 612 aa3.81□□□□□ -1.8
SPG11-211ENST00000558561 SH3GL2Q99962 352 aa3.81□□□□□ -1.8
SPG11-211ENST00000558561 TTYH2Q9BSA4 534 aa3.81□□□□□ -1.8
SPG11-211ENST00000558561 LMF2Q9BU23 707 aaKnown RBP3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms