RNA–Protein interactions for RNA: ENST00000558439.5

AP4E1-202, Transcript of adaptor related protein complex 4 subunit epsilon 1, humanhuman

TSL 1 (best)

Gene AP4E1, Length 4,165 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1-202ENST00000558439 ST6GAL1P15907 406 aa14.28□□□□□ -0.12
AP4E1-202ENST00000558439 NRG3P56975 720 aa14.28□□□□□ -0.12
AP4E1-202ENST00000558439 OC90Q02509 493 aaPredicted RBP14.28□□□□□ -0.12
AP4E1-202ENST00000558439 PLCXD2Q0VAA5 305 aa14.28□□□□□ -0.12
AP4E1-202ENST00000558439 MLC1Q15049 377 aa14.28□□□□□ -0.12
AP4E1-202ENST00000558439 ZNF79Q15937 498 aa14.28□□□□□ -0.12
AP4E1-202ENST00000558439 SLC25A35Q3KQZ1 300 aa14.28□□□□□ -0.12
AP4E1-202ENST00000558439 ZCCHC12Q6PEW1 402 aa14.28□□□□□ -0.12
AP4E1-202ENST00000558439 OR2T4Q8NH00 348 aa14.28□□□□□ -0.12
AP4E1-202ENST00000558439 SYNPRQ8TBG9 265 aa14.28□□□□□ -0.12
AP4E1-202ENST00000558439 CMC2Q9NRP2 79 aa14.28□□□□□ -0.12
AP4E1-202ENST00000558439 DUSP22Q9NRW4 184 aa14.28□□□□□ -0.12
AP4E1-202ENST00000558439 KLHL21Q9UJP4 597 aa14.28□□□□□ -0.12
AP4E1-202ENST00000558439 V9GYH0 126 aa14.28□□□□□ -0.12
AP4E1-202ENST00000558439 ANKRD34BA5PLL1 514 aa14.27□□□□□ -0.12
AP4E1-202ENST00000558439 APBB3O95704 486 aa14.27□□□□□ -0.12
AP4E1-202ENST00000558439 GPR50Q13585 617 aa14.27□□□□□ -0.12
AP4E1-202ENST00000558439 POU4F3Q15319 338 aa14.27□□□□□ -0.12
AP4E1-202ENST00000558439 THSD4Q6ZMP0 1018 aa14.27□□□□□ -0.12
AP4E1-202ENST00000558439 COMTD1Q86VU5 262 aa14.27□□□□□ -0.12
AP4E1-202ENST00000558439 MIXL1Q9H2W2 232 aa14.27□□□□□ -0.12
AP4E1-202ENST00000558439 KLHL9Q9P2J3 617 aa14.27□□□□□ -0.12
AP4E1-202ENST00000558439 TCRBP04435 133 aa14.27□□□□□ -0.12
AP4E1-202ENST00000558439 BTG2P78543 158 aa14.27□□□□□ -0.12
AP4E1-202ENST00000558439 SLC22A10Q63ZE4 541 aa14.27□□□□□ -0.12
AP4E1-202ENST00000558439 SLC35D2Q76EJ3 337 aa14.27□□□□□ -0.12
AP4E1-202ENST00000558439 LSM14AQ8ND56 463 aaKnown RBP14.27□□□□□ -0.12
AP4E1-202ENST00000558439 SLC6A18Q96N87 628 aa14.27□□□□□ -0.12
AP4E1-202ENST00000558439 MAN2C1Q9NTJ4 1040 aa14.27□□□□□ -0.12
AP4E1-202ENST00000558439 ACOXLQ9NUZ1 547 aa14.27□□□□□ -0.12
AP4E1-202ENST00000558439 SCML1Q9UN30 329 aa14.27□□□□□ -0.12
AP4E1-202ENST00000558439 E9PI62 339 aa14.27□□□□□ -0.13
AP4E1-202ENST00000558439 DGCR2P98153 550 aa14.27□□□□□ -0.13
AP4E1-202ENST00000558439 ELOCQ15369 112 aa14.27□□□□□ -0.13
AP4E1-202ENST00000558439 TPRA1Q86W33 373 aa14.27□□□□□ -0.13
AP4E1-202ENST00000558439 IL17RCQ8NAC3 791 aa14.27□□□□□ -0.13
AP4E1-202ENST00000558439 OR5H6Q8NGV6 325 aa14.27□□□□□ -0.13
AP4E1-202ENST00000558439 COQ8AQ8NI60 647 aa14.27□□□□□ -0.13
AP4E1-202ENST00000558439 C17orf50Q8WW18 174 aa14.27□□□□□ -0.13
AP4E1-202ENST00000558439 GIMAP1Q8WWP7 306 aa14.27□□□□□ -0.13
AP4E1-202ENST00000558439 HHIPQ96QV1 700 aa14.27□□□□□ -0.13
AP4E1-202ENST00000558439 ARHGDIGQ99819 225 aa14.27□□□□□ -0.13
AP4E1-202ENST00000558439 ALG12Q9BV10 488 aa14.27□□□□□ -0.13
AP4E1-202ENST00000558439 TCEAL2Q9H3H9 227 aaPredicted RBP14.27□□□□□ -0.13
AP4E1-202ENST00000558439 V9GY05 133 aa14.27□□□□□ -0.13
AP4E1-202ENST00000558439 CENPVL1A0A0U1RR11 272 aa14.26□□□□□ -0.13
AP4E1-202ENST00000558439 KDM4EB2RXH2 506 aaPredicted RBP14.26□□□□□ -0.13
AP4E1-202ENST00000558439 PRAMEF26H0Y7S4 382 aa14.26□□□□□ -0.13
AP4E1-202ENST00000558439 DNAJB6O75190 326 aa14.26□□□□□ -0.13
AP4E1-202ENST00000558439 RFPL3O75679 317 aa14.26□□□□□ -0.13
AP4E1-202ENST00000558439 GATBO75879 557 aaKnown RBP14.26□□□□□ -0.13
AP4E1-202ENST00000558439 GDNFP39905 211 aa14.26□□□□□ -0.13
AP4E1-202ENST00000558439 PTH2RP49190 550 aa14.26□□□□□ -0.13
AP4E1-202ENST00000558439 DPY19L4Q7Z388 723 aa14.26□□□□□ -0.13
AP4E1-202ENST00000558439 GALNTL5Q7Z4T8 443 aa14.26□□□□□ -0.13
AP4E1-202ENST00000558439 CCDC28AQ8IWP9 274 aa14.26□□□□□ -0.13
AP4E1-202ENST00000558439 KIAA1143Q96AT1 154 aaPredicted RBP14.26□□□□□ -0.13
AP4E1-202ENST00000558439 CMKLR1Q99788 373 aa14.26□□□□□ -0.13
AP4E1-202ENST00000558439 SPAG17Q6Q759 2223 aa14.26□□□□□ -0.13
AP4E1-202ENST00000558439 KIR2DS5A0A0G2JLQ3 304 aa14.26□□□□□ -0.13
AP4E1-202ENST00000558439 A0A0G2JNG1 304 aa14.26□□□□□ -0.13
AP4E1-202ENST00000558439 DCDC2BA2VCK2 349 aa14.26□□□□□ -0.13
AP4E1-202ENST00000558439 TRIM64BA6NI03 449 aa14.26□□□□□ -0.13
AP4E1-202ENST00000558439 KIR2DS3K7RE56 304 aa14.26□□□□□ -0.13
AP4E1-202ENST00000558439 CHP2O43745 196 aa14.26□□□□□ -0.13
AP4E1-202ENST00000558439 SLC43A1O75387 559 aa14.26□□□□□ -0.13
AP4E1-202ENST00000558439 KDM4BO94953 1096 aa14.26□□□□□ -0.13
AP4E1-202ENST00000558439 NUP62P37198 522 aaPredicted RBP14.26□□□□□ -0.13
AP4E1-202ENST00000558439 RAB38P57729 211 aa14.26□□□□□ -0.13
AP4E1-202ENST00000558439 KIR2DS5Q14953 304 aa14.26□□□□□ -0.13
AP4E1-202ENST00000558439 TMEM184AQ6ZMB5 413 aa14.26□□□□□ -0.13
AP4E1-202ENST00000558439 GKN2Q86XP6 184 aa14.26□□□□□ -0.13
AP4E1-202ENST00000558439 HCAR1Q9BXC0 346 aa14.26□□□□□ -0.13
AP4E1-202ENST00000558439 INPP5EQ9NRR6 644 aa14.26□□□□□ -0.13
AP4E1-202ENST00000558439 TRAPPC4Q9Y296 219 aa14.26□□□□□ -0.13
AP4E1-202ENST00000558439 NUBP2Q9Y5Y2 271 aa14.26□□□□□ -0.13
AP4E1-202ENST00000558439 VAMP1P23763 118 aa14.26□□□□□ -0.13
AP4E1-202ENST00000558439 PRPS1P60891 318 aa14.26□□□□□ -0.13
AP4E1-202ENST00000558439 APOOLQ6UXV4 268 aa14.26□□□□□ -0.13
AP4E1-202ENST00000558439 KIAA0907Q7Z7F0 614 aaPredicted RBP14.26□□□□□ -0.13
AP4E1-202ENST00000558439 PLCZ1Q86YW0 608 aa14.26□□□□□ -0.13
AP4E1-202ENST00000558439 MRGPRX1Q96LB2 322 aa14.26□□□□□ -0.13
AP4E1-202ENST00000558439 PFDN2Q9UHV9 154 aa14.26□□□□□ -0.13
AP4E1-202ENST00000558439 CD207Q9UJ71 328 aa14.26□□□□□ -0.13
AP4E1-202ENST00000558439 SEMA7AO75326 666 aa14.26□□□□□ -0.13
AP4E1-202ENST00000558439 UBL4AP11441 157 aa14.26□□□□□ -0.13
AP4E1-202ENST00000558439 RBMS1P29558 406 aaKnown RBP14.26□□□□□ -0.13
AP4E1-202ENST00000558439 TNFRSF4P43489 277 aa14.26□□□□□ -0.13
AP4E1-202ENST00000558439 LIMS1P48059 325 aa14.26□□□□□ -0.13
AP4E1-202ENST00000558439 EMDP50402 254 aa14.26□□□□□ -0.13
AP4E1-202ENST00000558439 KLHL26Q53HC5 615 aa14.26□□□□□ -0.13
AP4E1-202ENST00000558439 AADACL4Q5VUY2 407 aa14.26□□□□□ -0.13
AP4E1-202ENST00000558439 METTL17Q9H7H0 456 aaPredicted RBP14.26□□□□□ -0.13
AP4E1-202ENST00000558439 POT1Q9NUX5 634 aa14.26□□□□□ -0.13
AP4E1-202ENST00000558439 FBXL3Q9UKT7 428 aa14.26□□□□□ -0.13
AP4E1-202ENST00000558439 TRIM3O75382 744 aaPredicted RBP14.25□□□□□ -0.13
AP4E1-202ENST00000558439 OPN1LWP04000 364 aa14.25□□□□□ -0.13
AP4E1-202ENST00000558439 OR2T7P0C7T2 308 aa14.25□□□□□ -0.13
AP4E1-202ENST00000558439 SLC35E2P0CK97 266 aa14.25□□□□□ -0.13
AP4E1-202ENST00000558439 RFX2P48378 723 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms