RNA–Protein interactions for RNA: ENST00000558319.5

SPG11-210, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SPG11, Length 6,426 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-210ENST00000558319 CSNK1EP49674 416 aaKnown RBP13.03□□□□□ -0.32
SPG11-210ENST00000558319 BAXQ07812 192 aa13.03□□□□□ -0.32
SPG11-210ENST00000558319 TMEM135Q86UB9 458 aa13.03□□□□□ -0.32
SPG11-210ENST00000558319 HORMAD2Q8N7B1 307 aa13.03□□□□□ -0.32
SPG11-210ENST00000558319 PLPP5Q8NEB5 264 aa13.03□□□□□ -0.32
SPG11-210ENST00000558319 ZNF286AQ9HBT8 521 aa13.03□□□□□ -0.32
SPG11-210ENST00000558319 LRIT1Q9P2V4 623 aa13.03□□□□□ -0.32
SPG11-210ENST00000558319 PIGBOS1A0A0B4J2F0 54 aa13.03□□□□□ -0.32
SPG11-210ENST00000558319 MAN2B1O00754 1011 aa13.03□□□□□ -0.32
SPG11-210ENST00000558319 P2RX3P56373 397 aa13.03□□□□□ -0.32
SPG11-210ENST00000558319 KIAA0141Q14154 515 aaPredicted RBP13.03□□□□□ -0.32
SPG11-210ENST00000558319 ZNF74Q16587 644 aa13.03□□□□□ -0.32
SPG11-210ENST00000558319 DUSP6Q16828 381 aa13.03□□□□□ -0.32
SPG11-210ENST00000558319 PDLIM3Q53GG5 364 aaPredicted RBP13.03□□□□□ -0.32
SPG11-210ENST00000558319 NECAP1Q8NC96 275 aa13.03□□□□□ -0.32
SPG11-210ENST00000558319 OR5D18Q8NGL1 313 aa13.03□□□□□ -0.32
SPG11-210ENST00000558319 TM9SF4Q92544 642 aa13.03□□□□□ -0.32
SPG11-210ENST00000558319 MUL1Q969V5 352 aa13.03□□□□□ -0.32
SPG11-210ENST00000558319 SGK3Q96BR1 496 aa13.03□□□□□ -0.32
SPG11-210ENST00000558319 MED30Q96HR3 178 aa13.03□□□□□ -0.32
SPG11-210ENST00000558319 RNF170Q96K19 258 aa13.03□□□□□ -0.32
SPG11-210ENST00000558319 C1orf74Q96LT6 269 aa13.03□□□□□ -0.32
SPG11-210ENST00000558319 TRIB3Q96RU7 358 aa13.03□□□□□ -0.32
SPG11-210ENST00000558319 SORT1Q99523 831 aa13.03□□□□□ -0.32
SPG11-210ENST00000558319 KIF25Q9UIL4 384 aa13.03□□□□□ -0.32
SPG11-210ENST00000558319 PRSS44E7EML9 344 aa13.03□□□□□ -0.32
SPG11-210ENST00000558319 BET1O15155 118 aa13.03□□□□□ -0.32
SPG11-210ENST00000558319 FAM185AQ8N0U4 392 aa13.03□□□□□ -0.32
SPG11-210ENST00000558319 OR5D14Q8NGL3 314 aa13.03□□□□□ -0.32
SPG11-210ENST00000558319 MSI2Q96DH6 328 aaKnown RBP13.03□□□□□ -0.32
SPG11-210ENST00000558319 SLC2A13Q96QE2 648 aa13.03□□□□□ -0.32
SPG11-210ENST00000558319 ZNF587Q96SQ5 575 aaPredicted RBP13.03□□□□□ -0.32
SPG11-210ENST00000558319 GSTO2Q9H4Y5 243 aa13.03□□□□□ -0.32
SPG11-210ENST00000558319 DDCP20711 480 aa13.03□□□□□ -0.32
SPG11-210ENST00000558319 ZNF33AQ06730 810 aa13.03□□□□□ -0.32
SPG11-210ENST00000558319 FAM199XQ6PEV8 388 aaPredicted RBP13.03□□□□□ -0.32
SPG11-210ENST00000558319 PODNL1Q6PEZ8 512 aa13.03□□□□□ -0.32
SPG11-210ENST00000558319 HCAR1Q9BXC0 346 aa13.03□□□□□ -0.32
SPG11-210ENST00000558319 FAM212BQ9NTI7 297 aaPredicted RBP13.03□□□□□ -0.32
SPG11-210ENST00000558319 SLIT2O94813 1529 aa13.03□□□□□ -0.32
SPG11-210ENST00000558319 MROH1Q8NDA8 1641 aa13.03□□□□□ -0.32
SPG11-210ENST00000558319 PLSCR5A0PG75 271 aa13.03□□□□□ -0.32
SPG11-210ENST00000558319 ANKRD30BLA7E2S9 258 aa13.03□□□□□ -0.32
SPG11-210ENST00000558319 XRCC3O43542 346 aa13.03□□□□□ -0.32
SPG11-210ENST00000558319 EN2P19622 333 aaPredicted RBP13.03□□□□□ -0.32
SPG11-210ENST00000558319 ETFRF1Q6IPR1 90 aa13.03□□□□□ -0.32
SPG11-210ENST00000558319 NDUFAF7Q7L592 441 aa13.03□□□□□ -0.32
SPG11-210ENST00000558319 OR10Z1Q8NGY1 313 aa13.03□□□□□ -0.32
SPG11-210ENST00000558319 TBC1D20Q96BZ9 403 aa13.03□□□□□ -0.32
SPG11-210ENST00000558319 OR6C1Q96RD1 312 aa13.03□□□□□ -0.32
SPG11-210ENST00000558319 Q9Y3F1 56 aa13.03□□□□□ -0.32
SPG11-210ENST00000558319 H7C1Q1 480 aa13.02□□□□□ -0.32
SPG11-210ENST00000558319 GPR37L1O60883 481 aa13.02□□□□□ -0.32
SPG11-210ENST00000558319 TGM1P22735 817 aa13.02□□□□□ -0.32
SPG11-210ENST00000558319 SRP9P49458 86 aaKnown RBP13.02□□□□□ -0.32
SPG11-210ENST00000558319 XYLT2Q9H1B5 865 aa13.02□□□□□ -0.32
SPG11-210ENST00000558319 MYH11P35749 1972 aa13.02□□□□□ -0.32
SPG11-210ENST00000558319 C7orf72A4D263 438 aa13.02□□□□□ -0.32
SPG11-210ENST00000558319 PPP1R2P9O14990 202 aa13.02□□□□□ -0.32
SPG11-210ENST00000558319 NSA2O95478 260 aaKnown RBP13.02□□□□□ -0.32
SPG11-210ENST00000558319 PNPP00491 289 aa13.02□□□□□ -0.32
SPG11-210ENST00000558319 GDNFP39905 211 aa13.02□□□□□ -0.32
SPG11-210ENST00000558319 PRPS1P60891 318 aa13.02□□□□□ -0.32
SPG11-210ENST00000558319 SLC5A12Q1EHB4 618 aa13.02□□□□□ -0.32
SPG11-210ENST00000558319 ATPAF1Q5TC12 328 aaPredicted RBP13.02□□□□□ -0.32
SPG11-210ENST00000558319 ZNF704Q6ZNC4 412 aaPredicted RBP13.02□□□□□ -0.32
SPG11-210ENST00000558319 FOXQ1Q9C009 403 aa13.02□□□□□ -0.32
SPG11-210ENST00000558319 NKX6-2Q9C056 277 aaPredicted RBP13.02□□□□□ -0.32
SPG11-210ENST00000558319 FBXO7Q9Y3I1 522 aa13.02□□□□□ -0.32
SPG11-210ENST00000558319 LTN1O94822 1766 aa13.02□□□□□ -0.32
SPG11-210ENST00000558319 UBR1Q8IWV7 1749 aa13.02□□□□□ -0.33
SPG11-210ENST00000558319 ZFP92A6NM28 416 aa13.02□□□□□ -0.33
SPG11-210ENST00000558319 ARHGAP33O14559 1287 aa13.02□□□□□ -0.33
SPG11-210ENST00000558319 TIMP1P01033 207 aa13.02□□□□□ -0.33
SPG11-210ENST00000558319 HNF1AP20823 631 aa13.02□□□□□ -0.33
SPG11-210ENST00000558319 RAB40BQ12829 278 aa13.02□□□□□ -0.33
SPG11-210ENST00000558319 PGAP1Q75T13 922 aa13.02□□□□□ -0.33
SPG11-210ENST00000558319 ZNF440Q8IYI8 595 aa13.02□□□□□ -0.33
SPG11-210ENST00000558319 CPNE4Q96A23 557 aaPredicted RBP13.02□□□□□ -0.33
SPG11-210ENST00000558319 NT5DC2Q9H857 520 aa13.02□□□□□ -0.33
SPG11-210ENST00000558319 TMEM265A0A087WTH1 108 aa13.02□□□□□ -0.33
SPG11-210ENST00000558319 C20orf202A1L168 122 aa13.02□□□□□ -0.33
SPG11-210ENST00000558319 ACOD1A6NK06 481 aa13.02□□□□□ -0.33
SPG11-210ENST00000558319 FAM163BP0C2L3 166 aa13.02□□□□□ -0.33
SPG11-210ENST00000558319 MMP12P39900 470 aa13.02□□□□□ -0.33
SPG11-210ENST00000558319 SELPLGQ14242 412 aa13.02□□□□□ -0.33
SPG11-210ENST00000558319 OR1E3Q8WZA6 343 aa13.02□□□□□ -0.33
SPG11-210ENST00000558319 UHRF2Q96PU4 802 aa13.02□□□□□ -0.33
SPG11-210ENST00000558319 MFRPQ9BY79 579 aa13.02□□□□□ -0.33
SPG11-210ENST00000558319 C11orf54Q9H0W9 315 aaPredicted RBP13.02□□□□□ -0.33
SPG11-210ENST00000558319 SLC23A2Q9UGH3 650 aa13.02□□□□□ -0.33
SPG11-210ENST00000558319 INCA1Q0VD86 236 aa13.02□□□□□ -0.33
SPG11-210ENST00000558319 PLAC9Q5JTB6 97 aa13.02□□□□□ -0.33
SPG11-210ENST00000558319 MEPCEQ7L2J0 689 aaKnown RBP13.02□□□□□ -0.33
SPG11-210ENST00000558319 OLIG3Q7RTU3 272 aa13.02□□□□□ -0.33
SPG11-210ENST00000558319 SMAP2Q8WU79 429 aaPredicted RBP13.02□□□□□ -0.33
SPG11-210ENST00000558319 VRTNQ9H8Y1 702 aa13.02□□□□□ -0.33
SPG11-210ENST00000558319 HSF5Q4G112 596 aaPredicted RBP13.01□□□□□ -0.33
SPG11-210ENST00000558319 TMEM184AQ6ZMB5 413 aa13.01□□□□□ -0.33
SPG11-210ENST00000558319 TMEM163Q8TC26 289 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms