RNA–Protein interactions for RNA: ENST00000558314.5

TPM1-211, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,031 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-211ENST00000558314 FKBP2P26885 142 aaKnown RBP13.66□□□□□ -0.22
TPM1-211ENST00000558314 SLC1A3P43003 542 aa13.66□□□□□ -0.22
TPM1-211ENST00000558314 COPZ1P61923 177 aa13.66□□□□□ -0.22
TPM1-211ENST00000558314 EPS8Q12929 822 aa13.66□□□□□ -0.22
TPM1-211ENST00000558314 GABRA6Q16445 453 aa13.66□□□□□ -0.22
TPM1-211ENST00000558314 RPS26P11Q5JNZ5 115 aaPredicted RBP13.66□□□□□ -0.22
TPM1-211ENST00000558314 C6orf10Q5SRN2 563 aa13.66□□□□□ -0.22
TPM1-211ENST00000558314 TSPO2Q5TGU0 170 aa13.66□□□□□ -0.22
TPM1-211ENST00000558314 ZNF836Q6ZNA1 936 aa13.66□□□□□ -0.22
TPM1-211ENST00000558314 CMIPQ8IY22 773 aa13.66□□□□□ -0.22
TPM1-211ENST00000558314 LRRC34Q8IZ02 419 aa13.66□□□□□ -0.22
TPM1-211ENST00000558314 MUC15Q8N387 334 aa13.66□□□□□ -0.22
TPM1-211ENST00000558314 TMEM99Q8N816 258 aa13.66□□□□□ -0.22
TPM1-211ENST00000558314 OR52P1PQ8NH57 321 aa13.66□□□□□ -0.22
TPM1-211ENST00000558314 PMM1Q92871 262 aa13.66□□□□□ -0.22
TPM1-211ENST00000558314 SLC7A10Q9NS82 523 aa13.66□□□□□ -0.22
TPM1-211ENST00000558314 SLC6A13Q9NSD5 602 aa13.66□□□□□ -0.22
TPM1-211ENST00000558314 PARPBPQ9NWS1 579 aa13.66□□□□□ -0.22
TPM1-211ENST00000558314 ADPRHL2Q9NX46 363 aa13.66□□□□□ -0.22
TPM1-211ENST00000558314 P2RX2Q9UBL9 471 aa13.66□□□□□ -0.22
TPM1-211ENST00000558314 MGAT4BQ9UQ53 548 aa13.66□□□□□ -0.22
TPM1-211ENST00000558314 TRAPPC4Q9Y296 219 aa13.66□□□□□ -0.22
TPM1-211ENST00000558314 SLC9A8Q9Y2E8 581 aa13.66□□□□□ -0.22
TPM1-211ENST00000558314 FLVCR1Q9Y5Y0 555 aa13.66□□□□□ -0.22
TPM1-211ENST00000558314 GPR45Q9Y5Y3 372 aa13.66□□□□□ -0.22
TPM1-211ENST00000558314 KLF11O14901 512 aa13.65□□□□□ -0.22
TPM1-211ENST00000558314 ZNF208O43345 1280 aa13.65□□□□□ -0.22
TPM1-211ENST00000558314 DNPH1O43598 174 aa13.65□□□□□ -0.22
TPM1-211ENST00000558314 CRLF1O75462 422 aa13.65□□□□□ -0.22
TPM1-211ENST00000558314 SLC22A3O75751 556 aa13.65□□□□□ -0.22
TPM1-211ENST00000558314 TTKP33981 857 aa13.65□□□□□ -0.22
TPM1-211ENST00000558314 SLC16A1P53985 500 aa13.65□□□□□ -0.22
TPM1-211ENST00000558314 WDR4P57081 412 aaKnown RBP13.65□□□□□ -0.22
TPM1-211ENST00000558314 IRX1P78414 480 aaPredicted RBP13.65□□□□□ -0.22
TPM1-211ENST00000558314 KRTAP1-1Q07627 177 aa13.65□□□□□ -0.22
TPM1-211ENST00000558314 RAB35Q15286 201 aa13.65□□□□□ -0.22
TPM1-211ENST00000558314 GTDC1Q4AE62 458 aa13.65□□□□□ -0.22
TPM1-211ENST00000558314 SLC9B1Q4ZJI4 515 aa13.65□□□□□ -0.22
TPM1-211ENST00000558314 LIN52Q52LA3 116 aa13.65□□□□□ -0.22
TPM1-211ENST00000558314 ATG16L1Q676U5 607 aa13.65□□□□□ -0.22
TPM1-211ENST00000558314 OR7E24Q6IFN5 339 aa13.65□□□□□ -0.22
TPM1-211ENST00000558314 KLHL24Q6TFL4 600 aa13.65□□□□□ -0.22
TPM1-211ENST00000558314 B3GLCTQ6Y288 498 aa13.65□□□□□ -0.22
TPM1-211ENST00000558314 SSX8Q7RTT4 187 aa13.65□□□□□ -0.22
TPM1-211ENST00000558314 AAED1Q7RTV5 226 aa13.65□□□□□ -0.22
TPM1-211ENST00000558314 DTX2Q86UW9 622 aa13.65□□□□□ -0.22
TPM1-211ENST00000558314 AURKBQ96GD4 344 aaPredicted RBP13.65□□□□□ -0.22
TPM1-211ENST00000558314 DHRS9Q9BPW9 319 aa13.65□□□□□ -0.22
TPM1-211ENST00000558314 TAPBPLQ9BX59 468 aa13.65□□□□□ -0.22
TPM1-211ENST00000558314 THAP1Q9NVV9 213 aa13.65□□□□□ -0.22
TPM1-211ENST00000558314 NKIRAS1Q9NYS0 192 aa13.65□□□□□ -0.22
TPM1-211ENST00000558314 MALT1Q9UDY8 824 aa13.65□□□□□ -0.22
TPM1-211ENST00000558314 ZANQ9Y493 2812 aa13.65□□□□□ -0.22
TPM1-211ENST00000558314 IGHV4-30-2A0A087WSY4 118 aa13.64□□□□□ -0.23
TPM1-211ENST00000558314 FAM234BA2RU67 622 aa13.64□□□□□ -0.23
TPM1-211ENST00000558314 TMEM247A6NEH6 219 aa13.64□□□□□ -0.23
TPM1-211ENST00000558314 IL6P05231 212 aa13.64□□□□□ -0.23
TPM1-211ENST00000558314 GPIP06744 558 aa13.64□□□□□ -0.23
TPM1-211ENST00000558314 IDO1P14902 403 aa13.64□□□□□ -0.23
TPM1-211ENST00000558314 DSTNP60981 165 aa13.64□□□□□ -0.23
TPM1-211ENST00000558314 TGFBR3Q03167 851 aa13.64□□□□□ -0.23
TPM1-211ENST00000558314 LRRC74AQ0VAA2 488 aa13.64□□□□□ -0.23
TPM1-211ENST00000558314 SLC17A1Q14916 467 aa13.64□□□□□ -0.23
TPM1-211ENST00000558314 NRF1Q16656 503 aa13.64□□□□□ -0.23
TPM1-211ENST00000558314 TMEM225Q6GV28 225 aa13.64□□□□□ -0.23
TPM1-211ENST00000558314 CLEC2AQ6UVW9 174 aa13.64□□□□□ -0.23
TPM1-211ENST00000558314 CROCCP2Q86T23 111 aa13.64□□□□□ -0.23
TPM1-211ENST00000558314 ZNF440Q8IYI8 595 aa13.64□□□□□ -0.23
TPM1-211ENST00000558314 WDR31Q8NA23 367 aa13.64□□□□□ -0.23
TPM1-211ENST00000558314 GLB1L3Q8NCI6 653 aaPredicted RBP13.64□□□□□ -0.23
TPM1-211ENST00000558314 OR9K2Q8NGE7 335 aa13.64□□□□□ -0.23
TPM1-211ENST00000558314 RMND5AQ9H871 391 aa13.64□□□□□ -0.23
TPM1-211ENST00000558314 SLC17A5Q9NRA2 495 aa13.64□□□□□ -0.23
TPM1-211ENST00000558314 CBLN4Q9NTU7 201 aa13.64□□□□□ -0.23
TPM1-211ENST00000558314 ZNF443Q9Y2A4 671 aaPredicted RBP13.64□□□□□ -0.23
TPM1-211ENST00000558314 ALPK2Q86TB3 2170 aa13.64□□□□□ -0.23
TPM1-211ENST00000558314 SONP18583 2426 aaKnown RBP13.63□□□□□ -0.23
TPM1-211ENST00000558314 GPRIN2O60269 458 aa13.63□□□□□ -0.23
TPM1-211ENST00000558314 PRG2P13727 222 aa13.63□□□□□ -0.23
TPM1-211ENST00000558314 RPS4Y1P22090 263 aaKnown RBP13.63□□□□□ -0.23
TPM1-211ENST00000558314 CRISP3P54108 245 aa13.63□□□□□ -0.23
TPM1-211ENST00000558314 TXNL4AP83876 142 aaKnown RBP13.63□□□□□ -0.23
TPM1-211ENST00000558314 SLC25A3Q00325 362 aa13.63□□□□□ -0.23
TPM1-211ENST00000558314 PDCD4Q53EL6 469 aaKnown RBP13.63□□□□□ -0.23
TPM1-211ENST00000558314 HIKESHIQ53FT3 197 aa13.63□□□□□ -0.23
TPM1-211ENST00000558314 TNFAIP8L3Q5GJ75 292 aa13.63□□□□□ -0.23
TPM1-211ENST00000558314 PAQR6Q6TCH4 344 aa13.63□□□□□ -0.23
TPM1-211ENST00000558314 CLIP4Q8N3C7 705 aa13.63□□□□□ -0.23
TPM1-211ENST00000558314 OR9I1Q8NGQ6 314 aa13.63□□□□□ -0.23
TPM1-211ENST00000558314 VPS33AQ96AX1 596 aa13.63□□□□□ -0.23
TPM1-211ENST00000558314 SLC25A36Q96CQ1 311 aa13.63□□□□□ -0.23
TPM1-211ENST00000558314 TMEM19Q96HH6 336 aa13.63□□□□□ -0.23
TPM1-211ENST00000558314 MUS81Q96NY9 551 aa13.63□□□□□ -0.23
TPM1-211ENST00000558314 ZNF385AQ96PM9 386 aaKnown RBP13.63□□□□□ -0.23
TPM1-211ENST00000558314 MANSC1Q9H8J5 431 aa13.63□□□□□ -0.23
TPM1-211ENST00000558314 FKRPQ9H9S5 495 aa13.63□□□□□ -0.23
TPM1-211ENST00000558314 TPT1P8Q9HAU6 139 aa13.63□□□□□ -0.23
TPM1-211ENST00000558314 CALML5Q9NZT1 146 aa13.63□□□□□ -0.23
TPM1-211ENST00000558314 RAB21Q9UL25 225 aa13.63□□□□□ -0.23
TPM1-211ENST00000558314 AMDHD2Q9Y303 409 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms