RNA–Protein interactions for RNA: ENST00000557713.5

SCFD1-224, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-224ENST00000557713 ALPK2Q86TB3 2170 aa13.96□□□□□ -0.18
SCFD1-224ENST00000557713 YLPM1P49750 1951 aaKnown RBP13.96□□□□□ -0.18
SCFD1-224ENST00000557713 ZC3H12DA2A288 527 aaKnown RBP13.95□□□□□ -0.18
SCFD1-224ENST00000557713 WDR91A4D1P6 747 aa13.95□□□□□ -0.18
SCFD1-224ENST00000557713 FAAHO00519 579 aa13.95□□□□□ -0.18
SCFD1-224ENST00000557713 SERPINE1P05121 402 aa13.95□□□□□ -0.18
SCFD1-224ENST00000557713 IGHV4-31P0DP07 118 aa13.95□□□□□ -0.18
SCFD1-224ENST00000557713 BMP4P12644 408 aa13.95□□□□□ -0.18
SCFD1-224ENST00000557713 TACR3P29371 465 aa13.95□□□□□ -0.18
SCFD1-224ENST00000557713 SLC1A3P43003 542 aa13.95□□□□□ -0.18
SCFD1-224ENST00000557713 ABCE1P61221 599 aaKnown RBP13.95□□□□□ -0.18
SCFD1-224ENST00000557713 TGFBR3Q03167 851 aa13.95□□□□□ -0.18
SCFD1-224ENST00000557713 SWI5Q1ZZU3 235 aa13.95□□□□□ -0.18
SCFD1-224ENST00000557713 DPY19L1Q2PZI1 675 aa13.95□□□□□ -0.18
SCFD1-224ENST00000557713 MST1LQ2TV78 715 aa13.95□□□□□ -0.18
SCFD1-224ENST00000557713 PAQR6Q6TCH4 344 aa13.95□□□□□ -0.18
SCFD1-224ENST00000557713 RNF130Q86XS8 419 aa13.95□□□□□ -0.18
SCFD1-224ENST00000557713 LRRC34Q8IZ02 419 aa13.95□□□□□ -0.18
SCFD1-224ENST00000557713 ZIC4Q8N9L1 334 aa13.95□□□□□ -0.18
SCFD1-224ENST00000557713 TMEM45BQ96B21 275 aa13.95□□□□□ -0.18
SCFD1-224ENST00000557713 CCDC115Q96NT0 180 aa13.95□□□□□ -0.18
SCFD1-224ENST00000557713 BEX2Q9BXY8 128 aa13.95□□□□□ -0.18
SCFD1-224ENST00000557713 ADAM19Q9H013 955 aa13.95□□□□□ -0.18
SCFD1-224ENST00000557713 MTHFD2LQ9H903 347 aaPredicted RBP13.95□□□□□ -0.18
SCFD1-224ENST00000557713 BTNL2Q9UIR0 455 aa13.95□□□□□ -0.18
SCFD1-224ENST00000557713 PMF1-BGLAPU3KQ54 211 aa13.95□□□□□ -0.18
SCFD1-224ENST00000557713 PLCE1Q9P212 2302 aa13.95□□□□□ -0.18
SCFD1-224ENST00000557713 BIRC5O15392 142 aa13.94□□□□□ -0.18
SCFD1-224ENST00000557713 LY6HO94772 140 aa13.94□□□□□ -0.18
SCFD1-224ENST00000557713 CHRM4P08173 479 aa13.94□□□□□ -0.18
SCFD1-224ENST00000557713 CSF3P09919 207 aa13.94□□□□□ -0.18
SCFD1-224ENST00000557713 RPS4Y1P22090 263 aaKnown RBP13.94□□□□□ -0.18
SCFD1-224ENST00000557713 USF1P22415 310 aaPredicted RBP13.94□□□□□ -0.18
SCFD1-224ENST00000557713 MPGP29372 298 aa13.94□□□□□ -0.18
SCFD1-224ENST00000557713 RPL14P50914 215 aaKnown RBP13.94□□□□□ -0.18
SCFD1-224ENST00000557713 CLNS1AP54105 237 aaKnown RBP13.94□□□□□ -0.18
SCFD1-224ENST00000557713 PRPS1P60891 318 aa13.94□□□□□ -0.18
SCFD1-224ENST00000557713 VSNL1P62760 191 aa13.94□□□□□ -0.18
SCFD1-224ENST00000557713 LSM11P83369 360 aaKnown RBP eCLIP13.94□□□□□ -0.18
SCFD1-224ENST00000557713 HPCAP84074 193 aa13.94□□□□□ -0.18
SCFD1-224ENST00000557713 CHI3L2Q15782 390 aa13.94□□□□□ -0.18
SCFD1-224ENST00000557713 LRRC74BQ6ZQY2 392 aa13.94□□□□□ -0.18
SCFD1-224ENST00000557713 TMEM99Q8N816 258 aa13.94□□□□□ -0.18
SCFD1-224ENST00000557713 TEX37Q96LM6 180 aa13.94□□□□□ -0.18
SCFD1-224ENST00000557713 SORT1Q99523 831 aa13.94□□□□□ -0.18
SCFD1-224ENST00000557713 TMEM109Q9BVC6 243 aa13.94□□□□□ -0.18
SCFD1-224ENST00000557713 LPAR3Q9UBY5 353 aa13.94□□□□□ -0.18
SCFD1-224ENST00000557713 CFAP73A6NFT4 308 aa13.93□□□□□ -0.18
SCFD1-224ENST00000557713 CCDC154A6NI56 674 aa13.93□□□□□ -0.18
SCFD1-224ENST00000557713 VWC2LB2RUY7 222 aa13.93□□□□□ -0.18
SCFD1-224ENST00000557713 E9PBE3 544 aa13.93□□□□□ -0.18
SCFD1-224ENST00000557713 ATP6V1G2-DDX39BF2Z307 99 aa13.93□□□□□ -0.18
SCFD1-224ENST00000557713 SNUPNO95149 360 aaKnown RBP13.93□□□□□ -0.18
SCFD1-224ENST00000557713 LBPP18428 481 aa13.93□□□□□ -0.18
SCFD1-224ENST00000557713 S100A3P33764 101 aa13.93□□□□□ -0.18
SCFD1-224ENST00000557713 THBS2P35442 1172 aa13.93□□□□□ -0.18
SCFD1-224ENST00000557713 EPS8Q12929 822 aa13.93□□□□□ -0.18
SCFD1-224ENST00000557713 GSTA3Q16772 222 aa13.93□□□□□ -0.18
SCFD1-224ENST00000557713 FAM174BQ3ZCQ3 159 aa13.93□□□□□ -0.18
SCFD1-224ENST00000557713 OTUD3Q5T2D3 398 aaPredicted RBP13.93□□□□□ -0.18
SCFD1-224ENST00000557713 OR9K2Q8NGE7 335 aa13.93□□□□□ -0.18
SCFD1-224ENST00000557713 AENQ8WTP8 325 aaKnown RBP13.93□□□□□ -0.18
SCFD1-224ENST00000557713 WDR60Q8WVS4 1066 aa13.93□□□□□ -0.18
SCFD1-224ENST00000557713 ZNF385AQ96PM9 386 aaKnown RBP13.93□□□□□ -0.18
SCFD1-224ENST00000557713 SF3B5Q9BWJ5 86 aaKnown RBP13.93□□□□□ -0.18
SCFD1-224ENST00000557713 PIF1Q9H611 641 aa13.93□□□□□ -0.18
SCFD1-224ENST00000557713 HAO1Q9UJM8 370 aa13.93□□□□□ -0.18
SCFD1-224ENST00000557713 PRDM4Q9UKN5 801 aa13.93□□□□□ -0.18
SCFD1-224ENST00000557713 MOKQ9UQ07 419 aa13.93□□□□□ -0.18
SCFD1-224ENST00000557713 LIPT2A6NK58 231 aa13.92□□□□□ -0.18
SCFD1-224ENST00000557713 LMX1BO60663 402 aa13.92□□□□□ -0.18
SCFD1-224ENST00000557713 AKR7A3O95154 331 aa13.92□□□□□ -0.18
SCFD1-224ENST00000557713 WNT11O96014 354 aa13.92□□□□□ -0.18
SCFD1-224ENST00000557713 DBIP07108 87 aaKnown RBP13.92□□□□□ -0.18
SCFD1-224ENST00000557713 IL7RP16871 459 aa13.92□□□□□ -0.18
SCFD1-224ENST00000557713 ZNF16P17020 682 aaPredicted RBP13.92□□□□□ -0.18
SCFD1-224ENST00000557713 CDKN2CP42773 168 aa13.92□□□□□ -0.18
SCFD1-224ENST00000557713 SLC1A6P48664 564 aa13.92□□□□□ -0.18
SCFD1-224ENST00000557713 UFM1P61960 85 aa13.92□□□□□ -0.18
SCFD1-224ENST00000557713 TXNL4AP83876 142 aaKnown RBP13.92□□□□□ -0.18
SCFD1-224ENST00000557713 CEACAM7Q14002 265 aa13.92□□□□□ -0.18
SCFD1-224ENST00000557713 GNA13Q14344 377 aa13.92□□□□□ -0.18
SCFD1-224ENST00000557713 MAPK11Q15759 364 aa13.92□□□□□ -0.18
SCFD1-224ENST00000557713 HIKESHIQ53FT3 197 aa13.92□□□□□ -0.18
SCFD1-224ENST00000557713 MRPL2Q5T653 305 aaKnown RBP13.92□□□□□ -0.18
SCFD1-224ENST00000557713 AAED1Q7RTV5 226 aa13.92□□□□□ -0.18
SCFD1-224ENST00000557713 ARIH2OSQ8N7S6 290 aa13.92□□□□□ -0.18
SCFD1-224ENST00000557713 POMGNT2Q8NAT1 580 aa13.92□□□□□ -0.18
SCFD1-224ENST00000557713 FBXO17Q96EF6 278 aa13.92□□□□□ -0.18
SCFD1-224ENST00000557713 NUF2Q9BZD4 464 aa13.92□□□□□ -0.18
SCFD1-224ENST00000557713 SHARPINQ9H0F6 387 aa13.92□□□□□ -0.18
SCFD1-224ENST00000557713 MEAF6Q9HAF1 191 aa13.92□□□□□ -0.18
SCFD1-224ENST00000557713 SVEP1Q4LDE5 3571 aa13.92□□□□□ -0.18
SCFD1-224ENST00000557713 IGHV1-18A0A0C4DH31 117 aa13.91□□□□□ -0.18
SCFD1-224ENST00000557713 AQP7P3A6NL99 342 aa13.91□□□□□ -0.18
SCFD1-224ENST00000557713 KLF11O14901 512 aa13.91□□□□□ -0.18
SCFD1-224ENST00000557713 GPIP06744 558 aa13.91□□□□□ -0.18
SCFD1-224ENST00000557713 ALDOCP09972 364 aaKnown RBP13.91□□□□□ -0.18
SCFD1-224ENST00000557713 CXCR1P25024 350 aa13.91□□□□□ -0.18
SCFD1-224ENST00000557713 IL12AP29459 219 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms