RNA–Protein interactions for RNA: ENST00000557658.5

VIPAS39-211, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-211ENST00000557658 PDCD1LG2Q9BQ51 273 aa10.88□□□□□ -0.67
VIPAS39-211ENST00000557658 DUSP22Q9NRW4 184 aa10.88□□□□□ -0.67
VIPAS39-211ENST00000557658 FBXO34Q9NWN3 711 aa10.88□□□□□ -0.67
VIPAS39-211ENST00000557658 SERTAD3Q9UJW9 196 aa10.88□□□□□ -0.67
VIPAS39-211ENST00000557658 ICAM5Q9UMF0 924 aa10.88□□□□□ -0.67
VIPAS39-211ENST00000557658 CA5BQ9Y2D0 317 aa10.88□□□□□ -0.67
VIPAS39-211ENST00000557658 PLEKHM1Q9Y4G2 1056 aa10.88□□□□□ -0.67
VIPAS39-211ENST00000557658 KCNMB2Q9Y691 235 aa10.88□□□□□ -0.67
VIPAS39-211ENST00000557658 SCN2AQ99250 2005 aa10.88□□□□□ -0.67
VIPAS39-211ENST00000557658 ANKRD20A5PA0PJZ0 165 aa10.88□□□□□ -0.67
VIPAS39-211ENST00000557658 OR6C65A6NJZ3 312 aa10.88□□□□□ -0.67
VIPAS39-211ENST00000557658 DPP4P27487 766 aa10.88□□□□□ -0.67
VIPAS39-211ENST00000557658 RPS15AP62244 130 aaKnown RBP10.88□□□□□ -0.67
VIPAS39-211ENST00000557658 LGALS3BPQ08380 585 aa10.88□□□□□ -0.67
VIPAS39-211ENST00000557658 GGTLC2Q14390 218 aa10.88□□□□□ -0.67
VIPAS39-211ENST00000557658 IRF4Q15306 451 aa10.88□□□□□ -0.67
VIPAS39-211ENST00000557658 TMEM81Q6P7N7 255 aa10.88□□□□□ -0.67
VIPAS39-211ENST00000557658 USP53Q70EK8 1073 aa10.88□□□□□ -0.67
VIPAS39-211ENST00000557658 FCRLAQ7L513 359 aa10.88□□□□□ -0.67
VIPAS39-211ENST00000557658 ZNF433Q8N7K0 673 aaPredicted RBP10.88□□□□□ -0.67
VIPAS39-211ENST00000557658 CDRT4Q8N9R6 151 aa10.88□□□□□ -0.67
VIPAS39-211ENST00000557658 SDR9C7Q8NEX9 313 aa10.88□□□□□ -0.67
VIPAS39-211ENST00000557658 OR4K13Q8NH42 304 aa10.88□□□□□ -0.67
VIPAS39-211ENST00000557658 MCCC2Q9HCC0 563 aa10.88□□□□□ -0.67
VIPAS39-211ENST00000557658 CA10Q9NS85 328 aa10.88□□□□□ -0.67
VIPAS39-211ENST00000557658 TAS2R10Q9NYW0 307 aa10.88□□□□□ -0.67
VIPAS39-211ENST00000557658 KLK11Q9UBX7 282 aa10.88□□□□□ -0.67
VIPAS39-211ENST00000557658 A0A0B4J2E0 115 aa10.87□□□□□ -0.67
VIPAS39-211ENST00000557658 A0A1B0GX12 115 aa10.87□□□□□ -0.67
VIPAS39-211ENST00000557658 SNRPGP15A8MWD9 76 aa10.87□□□□□ -0.67
VIPAS39-211ENST00000557658 MCRIP1C9JLW8 97 aa10.87□□□□□ -0.67
VIPAS39-211ENST00000557658 IL5P05113 134 aa10.87□□□□□ -0.67
VIPAS39-211ENST00000557658 STX4Q12846 297 aa10.87□□□□□ -0.67
VIPAS39-211ENST00000557658 NOGQ13253 232 aa10.87□□□□□ -0.67
VIPAS39-211ENST00000557658 TMEM69Q5SWH9 247 aa10.87□□□□□ -0.67
VIPAS39-211ENST00000557658 ZNF626Q68DY1 528 aa10.87□□□□□ -0.67
VIPAS39-211ENST00000557658 KIAA1324Q6UXG2 1013 aaKnown RBP10.87□□□□□ -0.67
VIPAS39-211ENST00000557658 RTL10Q7L3V2 364 aa10.87□□□□□ -0.67
VIPAS39-211ENST00000557658 DGLUCYQ7Z3D6 616 aa10.87□□□□□ -0.67
VIPAS39-211ENST00000557658 PAQR7Q86WK9 346 aa10.87□□□□□ -0.67
VIPAS39-211ENST00000557658 CACUL1Q86Y37 369 aa10.87□□□□□ -0.67
VIPAS39-211ENST00000557658 SERPINA12Q8IW75 414 aa10.87□□□□□ -0.67
VIPAS39-211ENST00000557658 SFTPA1Q8IWL2 248 aa10.87□□□□□ -0.67
VIPAS39-211ENST00000557658 OR51L1Q8NGJ5 315 aa10.87□□□□□ -0.67
VIPAS39-211ENST00000557658 C1orf216Q8TAB5 229 aa10.87□□□□□ -0.67
VIPAS39-211ENST00000557658 NT5CQ8TCD5 201 aa10.87□□□□□ -0.67
VIPAS39-211ENST00000557658 THEM6Q8WUY1 208 aa10.87□□□□□ -0.67
VIPAS39-211ENST00000557658 HHIPL1Q96JK4 782 aa10.87□□□□□ -0.67
VIPAS39-211ENST00000557658 KLHL15Q96M94 604 aa10.87□□□□□ -0.67
VIPAS39-211ENST00000557658 TOX2Q96NM4 488 aa10.87□□□□□ -0.67
VIPAS39-211ENST00000557658 DEFB118Q96PH6 123 aa10.87□□□□□ -0.67
VIPAS39-211ENST00000557658 SERINC2Q96SA4 455 aa10.87□□□□□ -0.67
VIPAS39-211ENST00000557658 GFI1Q99684 422 aa10.87□□□□□ -0.67
VIPAS39-211ENST00000557658 MRI1Q9BV20 369 aa10.87□□□□□ -0.67
VIPAS39-211ENST00000557658 SLC25A18Q9H1K4 315 aa10.87□□□□□ -0.67
VIPAS39-211ENST00000557658 POT1Q9NUX5 634 aa10.87□□□□□ -0.67
VIPAS39-211ENST00000557658 NCDNQ9UBB6 729 aa10.87□□□□□ -0.67
VIPAS39-211ENST00000557658 TBX21Q9UL17 535 aa10.87□□□□□ -0.67
VIPAS39-211ENST00000557658 MRPS23Q9Y3D9 190 aaKnown RBP10.87□□□□□ -0.67
VIPAS39-211ENST00000557658 GXYLT2A0PJZ3 443 aa10.87□□□□□ -0.67
VIPAS39-211ENST00000557658 OR2M5A3KFT3 312 aa10.87□□□□□ -0.67
VIPAS39-211ENST00000557658 KRBOX1C9JBD0 128 aa10.87□□□□□ -0.67
VIPAS39-211ENST00000557658 PIN1P1O15428 100 aa10.87□□□□□ -0.67
VIPAS39-211ENST00000557658 RGS11O94810 467 aa10.87□□□□□ -0.67
VIPAS39-211ENST00000557658 OR2A4O95047 310 aa10.87□□□□□ -0.67
VIPAS39-211ENST00000557658 AK1P00568 194 aa10.87□□□□□ -0.67
VIPAS39-211ENST00000557658 RAB40ALP0C0E4 278 aa10.87□□□□□ -0.67
VIPAS39-211ENST00000557658 SLC35G6P0C7Q6 338 aa10.87□□□□□ -0.67
VIPAS39-211ENST00000557658 PSMB10P40306 273 aa10.87□□□□□ -0.67
VIPAS39-211ENST00000557658 RBM34P42696 430 aaKnown RBP10.87□□□□□ -0.67
VIPAS39-211ENST00000557658 PTH2RP49190 550 aa10.87□□□□□ -0.67
VIPAS39-211ENST00000557658 PON3Q15166 354 aa10.87□□□□□ -0.67
VIPAS39-211ENST00000557658 LINC00303Q3SY05 128 aa10.87□□□□□ -0.67
VIPAS39-211ENST00000557658 FHL5Q5TD97 284 aa10.87□□□□□ -0.67
VIPAS39-211ENST00000557658 RGS7BPQ6MZT1 257 aaPredicted RBP10.87□□□□□ -0.67
VIPAS39-211ENST00000557658 FIGNL1Q6PIW4 674 aa10.87□□□□□ -0.67
VIPAS39-211ENST00000557658 ARSKQ6UWY0 536 aa10.87□□□□□ -0.67
VIPAS39-211ENST00000557658 MRPL43Q8N983 215 aaKnown RBP10.87□□□□□ -0.67
VIPAS39-211ENST00000557658 OR14A16Q8NHC5 309 aa10.87□□□□□ -0.67
VIPAS39-211ENST00000557658 DOK4Q8TEW6 326 aa10.87□□□□□ -0.67
VIPAS39-211ENST00000557658 C15orf40Q8WUR7 153 aa10.87□□□□□ -0.67
VIPAS39-211ENST00000557658 RAB40AQ8WXH6 277 aa10.87□□□□□ -0.67
VIPAS39-211ENST00000557658 PMM1Q92871 262 aa10.87□□□□□ -0.67
VIPAS39-211ENST00000557658 OR2A7Q96R45 310 aa10.87□□□□□ -0.67
VIPAS39-211ENST00000557658 STACQ99469 402 aa10.87□□□□□ -0.67
VIPAS39-211ENST00000557658 UTP23Q9BRU9 249 aaKnown RBP10.87□□□□□ -0.67
VIPAS39-211ENST00000557658 EVA1AQ9H8M9 152 aa10.87□□□□□ -0.67
VIPAS39-211ENST00000557658 ZDHHC4Q9NPG8 344 aa10.87□□□□□ -0.67
VIPAS39-211ENST00000557658 ZC4H2Q9NQZ6 224 aa10.87□□□□□ -0.67
VIPAS39-211ENST00000557658 CHRNA9Q9UGM1 479 aa10.87□□□□□ -0.67
VIPAS39-211ENST00000557658 PFDN2Q9UHV9 154 aa10.87□□□□□ -0.67
VIPAS39-211ENST00000557658 ING1Q9UK53 422 aaPredicted RBP10.87□□□□□ -0.67
VIPAS39-211ENST00000557658 FOXJ3Q9UPW0 622 aa10.87□□□□□ -0.67
VIPAS39-211ENST00000557658 V9GY05 133 aa10.87□□□□□ -0.67
VIPAS39-211ENST00000557658 A0A1B0GWA3 101 aa10.86□□□□□ -0.67
VIPAS39-211ENST00000557658 ACOD1A6NK06 481 aa10.86□□□□□ -0.67
VIPAS39-211ENST00000557658 ACOT7O00154 380 aa10.86□□□□□ -0.67
VIPAS39-211ENST00000557658 B3GALT2O43825 422 aa10.86□□□□□ -0.67
VIPAS39-211ENST00000557658 GALR3O60755 368 aaPredicted RBP10.86□□□□□ -0.67
VIPAS39-211ENST00000557658 KCNJ13O60928 360 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms