RNA–Protein interactions for RNA: ENST00000557644.5

NEDD1-213, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 1 (best) BASIC

Gene NEDD1, Length 2,367 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-213ENST00000557644 TMEM43Q9BTV4 400 aa13.7□□□□□ -0.22
NEDD1-213ENST00000557644 C20orf141Q9NUB4 165 aa13.7□□□□□ -0.22
NEDD1-213ENST00000557644 HDGFL3Q9Y3E1 203 aa13.7□□□□□ -0.22
NEDD1-213ENST00000557644 KIAA1549Q9HCM3 1950 aa13.7□□□□□ -0.22
NEDD1-213ENST00000557644 A0A087WUU8 490 aa13.69□□□□□ -0.22
NEDD1-213ENST00000557644 IGHV3-15A0A0B4J1V0 119 aa13.69□□□□□ -0.22
NEDD1-213ENST00000557644 FIGNL2A6NMB9 653 aa13.69□□□□□ -0.22
NEDD1-213ENST00000557644 AHRRA9YTQ3 701 aa13.69□□□□□ -0.22
NEDD1-213ENST00000557644 GADD45GO95257 159 aa13.69□□□□□ -0.22
NEDD1-213ENST00000557644 FKBP2P26885 142 aaKnown RBP13.69□□□□□ -0.22
NEDD1-213ENST00000557644 ACVR2AP27037 513 aa13.69□□□□□ -0.22
NEDD1-213ENST00000557644 CLK1P49759 484 aaKnown RBP13.69□□□□□ -0.22
NEDD1-213ENST00000557644 PON3Q15166 354 aa13.69□□□□□ -0.22
NEDD1-213ENST00000557644 SEC23BQ15437 767 aa13.69□□□□□ -0.22
NEDD1-213ENST00000557644 OR7A5Q15622 319 aa13.69□□□□□ -0.22
NEDD1-213ENST00000557644 PODNL1Q6PEZ8 512 aa13.69□□□□□ -0.22
NEDD1-213ENST00000557644 ZNF771Q7L3S4 317 aaPredicted RBP13.69□□□□□ -0.22
NEDD1-213ENST00000557644 ATCAYQ86WG3 371 aa13.69□□□□□ -0.22
NEDD1-213ENST00000557644 FNDC9Q8TBE3 224 aa13.69□□□□□ -0.22
NEDD1-213ENST00000557644 ZPLD1Q8TCW7 415 aa13.69□□□□□ -0.22
NEDD1-213ENST00000557644 POTEKPQ9BYX7 375 aa13.69□□□□□ -0.22
NEDD1-213ENST00000557644 U3KQV3 271 aa13.69□□□□□ -0.22
NEDD1-213ENST00000557644 WDR1O75083 606 aa13.69□□□□□ -0.22
NEDD1-213ENST00000557644 TGM6O95932 706 aa13.69□□□□□ -0.22
NEDD1-213ENST00000557644 CST1P01037 141 aa13.69□□□□□ -0.22
NEDD1-213ENST00000557644 FPR1P21462 350 aa13.69□□□□□ -0.22
NEDD1-213ENST00000557644 ENPP1P22413 925 aa13.69□□□□□ -0.22
NEDD1-213ENST00000557644 IDUAP35475 653 aa13.69□□□□□ -0.22
NEDD1-213ENST00000557644 IST1P53990 364 aa13.69□□□□□ -0.22
NEDD1-213ENST00000557644 RPS3AP61247 264 aaKnown RBP13.69□□□□□ -0.22
NEDD1-213ENST00000557644 LTBQ06643 244 aa13.69□□□□□ -0.22
NEDD1-213ENST00000557644 OR2T5Q6IEZ7 315 aa13.69□□□□□ -0.22
NEDD1-213ENST00000557644 CHMP1BQ7LBR1 199 aa13.69□□□□□ -0.22
NEDD1-213ENST00000557644 ADGRE4PQ86SQ3 457 aa13.69□□□□□ -0.22
NEDD1-213ENST00000557644 OR2T29Q8NH02 315 aa13.69□□□□□ -0.22
NEDD1-213ENST00000557644 ROBO4Q8WZ75 1007 aa13.69□□□□□ -0.22
NEDD1-213ENST00000557644 SLC25A36Q96CQ1 311 aa13.69□□□□□ -0.22
NEDD1-213ENST00000557644 MOGAT1Q96PD6 335 aa13.69□□□□□ -0.22
NEDD1-213ENST00000557644 UCN2Q96RP3 112 aa13.69□□□□□ -0.22
NEDD1-213ENST00000557644 TP63Q9H3D4 680 aaPredicted RBP13.69□□□□□ -0.22
NEDD1-213ENST00000557644 AP4S1Q9Y587 144 aa13.69□□□□□ -0.22
NEDD1-213ENST00000557644 TRAV36DV7A0A075B6V5 113 aa13.68□□□□□ -0.22
NEDD1-213ENST00000557644 LIPT2A6NK58 231 aa13.68□□□□□ -0.22
NEDD1-213ENST00000557644 RRP9O43818 475 aaKnown RBP13.68□□□□□ -0.22
NEDD1-213ENST00000557644 AHSA1O95433 338 aa13.68□□□□□ -0.22
NEDD1-213ENST00000557644 STSP08842 583 aa13.68□□□□□ -0.22
NEDD1-213ENST00000557644 CA7P43166 264 aa13.68□□□□□ -0.22
NEDD1-213ENST00000557644 OR2B6P58173 313 aa13.68□□□□□ -0.22
NEDD1-213ENST00000557644 LAPTM4AQ15012 233 aa13.68□□□□□ -0.22
NEDD1-213ENST00000557644 ZNF730Q6ZMV8 503 aa13.68□□□□□ -0.22
NEDD1-213ENST00000557644 SEM1Q6ZVN7 128 aa13.68□□□□□ -0.22
NEDD1-213ENST00000557644 DUS3LQ96G46 650 aaKnown RBP13.68□□□□□ -0.22
NEDD1-213ENST00000557644 FUZQ9BT04 418 aa13.68□□□□□ -0.22
NEDD1-213ENST00000557644 SEC14L4Q9UDX3 406 aa13.68□□□□□ -0.22
NEDD1-213ENST00000557644 LYVE1Q9Y5Y7 322 aa13.68□□□□□ -0.22
NEDD1-213ENST00000557644 MYO18BQ8IUG5 2567 aa13.68□□□□□ -0.22
NEDD1-213ENST00000557644 ZNF814B7Z6K7 855 aa13.68□□□□□ -0.22
NEDD1-213ENST00000557644 FTCDNL1E5RQL4 147 aa13.68□□□□□ -0.22
NEDD1-213ENST00000557644 AQP8O94778 261 aa13.68□□□□□ -0.22
NEDD1-213ENST00000557644 PMS2P2O95744 297 aa13.68□□□□□ -0.22
NEDD1-213ENST00000557644 GABRA1P14867 456 aa13.68□□□□□ -0.22
NEDD1-213ENST00000557644 RBM34P42696 430 aaKnown RBP13.68□□□□□ -0.22
NEDD1-213ENST00000557644 RAC3P60763 192 aa13.68□□□□□ -0.22
NEDD1-213ENST00000557644 ZNF239Q16600 458 aaKnown RBP13.68□□□□□ -0.22
NEDD1-213ENST00000557644 EXOC3L2Q2M3D2 409 aa13.68□□□□□ -0.22
NEDD1-213ENST00000557644 PDSS1Q5T2R2 415 aa13.68□□□□□ -0.22
NEDD1-213ENST00000557644 C1orf185Q5T7R7 199 aa13.68□□□□□ -0.22
NEDD1-213ENST00000557644 NRMQ8IXM6 262 aa13.68□□□□□ -0.22
NEDD1-213ENST00000557644 ACOT11Q8WXI4 607 aaPredicted RBP13.68□□□□□ -0.22
NEDD1-213ENST00000557644 ALPK1Q96QP1 1244 aa13.68□□□□□ -0.22
NEDD1-213ENST00000557644 ANKRD19PQ9H560 264 aa13.68□□□□□ -0.22
NEDD1-213ENST00000557644 ARMC1Q9NVT9 282 aa13.68□□□□□ -0.22
NEDD1-213ENST00000557644 CLCF1Q9UBD9 225 aa13.68□□□□□ -0.22
NEDD1-213ENST00000557644 ENO4A6NNW6 628 aa13.67□□□□□ -0.22
NEDD1-213ENST00000557644 AKR7A3O95154 331 aa13.67□□□□□ -0.22
NEDD1-213ENST00000557644 CH25HO95992 272 aa13.67□□□□□ -0.22
NEDD1-213ENST00000557644 LIMS1P48059 325 aa13.67□□□□□ -0.22
NEDD1-213ENST00000557644 FAM69AQ5T7M9 428 aa13.67□□□□□ -0.22
NEDD1-213ENST00000557644 CCDC103Q8IW40 242 aa13.67□□□□□ -0.22
NEDD1-213ENST00000557644 MARVELD2Q8N4S9 558 aa13.67□□□□□ -0.22
NEDD1-213ENST00000557644 C10orf53Q8N6V4 93 aa13.67□□□□□ -0.22
NEDD1-213ENST00000557644 LRRC17Q8N6Y2 441 aa13.67□□□□□ -0.22
NEDD1-213ENST00000557644 HS6ST2Q96MM7 605 aa13.67□□□□□ -0.22
NEDD1-213ENST00000557644 TRAPPC4Q9Y296 219 aa13.67□□□□□ -0.22
NEDD1-213ENST00000557644 MED31Q9Y3C7 131 aa13.67□□□□□ -0.22
NEDD1-213ENST00000557644 SAMHD1Q9Y3Z3 626 aaKnown RBP13.67□□□□□ -0.22
NEDD1-213ENST00000557644 HIVEP3Q5T1R4 2406 aa13.67□□□□□ -0.22
NEDD1-213ENST00000557644 SLC22A20A6NK97 555 aa13.67□□□□□ -0.22
NEDD1-213ENST00000557644 H3BNX3 289 aa13.67□□□□□ -0.22
NEDD1-213ENST00000557644 TNFRSF11BO00300 401 aa13.67□□□□□ -0.22
NEDD1-213ENST00000557644 RAMP1O60894 148 aa13.67□□□□□ -0.22
NEDD1-213ENST00000557644 BGLAPP02818 100 aa13.67□□□□□ -0.22
NEDD1-213ENST00000557644 FUT1P19526 365 aa13.67□□□□□ -0.22
NEDD1-213ENST00000557644 CASP6P55212 293 aa13.67□□□□□ -0.22
NEDD1-213ENST00000557644 CSNK2A1P68400 391 aaPredicted RBP13.67□□□□□ -0.22
NEDD1-213ENST00000557644 B3GNT6Q6ZMB0 384 aa13.67□□□□□ -0.22
NEDD1-213ENST00000557644 FJX1Q86VR8 437 aa13.67□□□□□ -0.22
NEDD1-213ENST00000557644 OR4C15Q8NGM1 316 aa13.67□□□□□ -0.22
NEDD1-213ENST00000557644 MFSD8Q8NHS3 518 aa13.67□□□□□ -0.22
NEDD1-213ENST00000557644 CPNE4Q96A23 557 aaPredicted RBP13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms