RNA–Protein interactions for RNA: ENST00000557487.5

SHMT2-232, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 1,918 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-232ENST00000557487 OR1A2Q9Y585 309 aa15□□□□□ -0.01
SHMT2-232ENST00000557487 TRAV27A0A087WT01 109 aa15□□□□□ -0.01
SHMT2-232ENST00000557487 SYPP08247 313 aa15□□□□□ -0.01
SHMT2-232ENST00000557487 FOSL2P15408 326 aa15□□□□□ -0.01
SHMT2-232ENST00000557487 SRMP19623 302 aa15□□□□□ -0.01
SHMT2-232ENST00000557487 DRD3P35462 400 aa15□□□□□ -0.01
SHMT2-232ENST00000557487 SELENOPP49908 381 aa15□□□□□ -0.01
SHMT2-232ENST00000557487 CRYZQ08257 329 aaKnown RBP15□□□□□ -0.01
SHMT2-232ENST00000557487 GPM6BQ13491 265 aa15□□□□□ -0.01
SHMT2-232ENST00000557487 ZNF267Q14586 743 aaPredicted RBP15□□□□□ -0.01
SHMT2-232ENST00000557487 ISXQ2M1V0 245 aa15□□□□□ -0.01
SHMT2-232ENST00000557487 TP53I3Q53FA7 332 aa15□□□□□ -0.01
SHMT2-232ENST00000557487 AGBL4Q5VU57 503 aa15□□□□□ -0.01
SHMT2-232ENST00000557487 FAM199XQ6PEV8 388 aaPredicted RBP15□□□□□ -0.01
SHMT2-232ENST00000557487 SSX6Q7RTT6 188 aa15□□□□□ -0.01
SHMT2-232ENST00000557487 OR51A7Q8NH64 312 aa15□□□□□ -0.01
SHMT2-232ENST00000557487 S100A16Q96FQ6 103 aaKnown RBP15□□□□□ -0.01
SHMT2-232ENST00000557487 LMAN2LQ9H0V9 348 aa15□□□□□ -0.01
SHMT2-232ENST00000557487 AUNIPQ9H7T9 357 aa15□□□□□ -0.01
SHMT2-232ENST00000557487 LIN7BQ9HAP6 207 aa15□□□□□ -0.01
SHMT2-232ENST00000557487 RDH8Q9NYR8 311 aa15□□□□□ -0.01
SHMT2-232ENST00000557487 HCN3Q9P1Z3 774 aa15□□□□□ -0.01
SHMT2-232ENST00000557487 CHRNA9Q9UGM1 479 aa15□□□□□ -0.01
SHMT2-232ENST00000557487 MOSPD1Q9UJG1 213 aa15□□□□□ -0.01
SHMT2-232ENST00000557487 AK6Q9Y3D8 172 aaKnown RBP15□□□□□ -0.01
SHMT2-232ENST00000557487 ETV7Q9Y603 341 aa15□□□□□ -0.01
SHMT2-232ENST00000557487 CIB4A0PJX0 185 aa14.99□□□□□ -0.01
SHMT2-232ENST00000557487 ANKRD20A5PA0PJZ0 165 aa14.99□□□□□ -0.01
SHMT2-232ENST00000557487 MID1O15344 667 aa14.99□□□□□ -0.01
SHMT2-232ENST00000557487 BRINP1O60477 761 aa14.99□□□□□ -0.01
SHMT2-232ENST00000557487 CREBL2O60519 120 aaPredicted RBP14.99□□□□□ -0.01
SHMT2-232ENST00000557487 OR2A4O95047 310 aa14.99□□□□□ -0.01
SHMT2-232ENST00000557487 NDUFB2O95178 105 aa14.99□□□□□ -0.01
SHMT2-232ENST00000557487 CLUP10909 449 aa14.99□□□□□ -0.01
SHMT2-232ENST00000557487 EDNRAP25101 427 aa14.99□□□□□ -0.01
SHMT2-232ENST00000557487 DIO1P49895 249 aa14.99□□□□□ -0.01
SHMT2-232ENST00000557487 SCAND1P57086 179 aa14.99□□□□□ -0.01
SHMT2-232ENST00000557487 POU6F2P78424 691 aaPredicted RBP14.99□□□□□ -0.01
SHMT2-232ENST00000557487 PON3Q15166 354 aa14.99□□□□□ -0.01
SHMT2-232ENST00000557487 B3GNTL1Q67FW5 361 aaPredicted RBP14.99□□□□□ -0.01
SHMT2-232ENST00000557487 PRSS45Q7RTY3 260 aa14.99□□□□□ -0.01
SHMT2-232ENST00000557487 CYB561A3Q8NBI2 242 aa14.99□□□□□ -0.01
SHMT2-232ENST00000557487 KCT2Q8NC54 265 aa14.99□□□□□ -0.01
SHMT2-232ENST00000557487 TM4SF19Q96DZ7 209 aa14.99□□□□□ -0.01
SHMT2-232ENST00000557487 OR2A7Q96R45 310 aa14.99□□□□□ -0.01
SHMT2-232ENST00000557487 MCCC2Q9HCC0 563 aa14.99□□□□□ -0.01
SHMT2-232ENST00000557487 EVA1BQ9NVM1 165 aa14.99□□□□□ -0.01
SHMT2-232ENST00000557487 MGAT4CQ9UBM8 478 aa14.99□□□□□ -0.01
SHMT2-232ENST00000557487 DAPP1Q9UN19 280 aa14.99□□□□□ -0.01
SHMT2-232ENST00000557487 SLC22A7Q9Y694 548 aa14.99□□□□□ -0.01
SHMT2-232ENST00000557487 MTCH2Q9Y6C9 303 aa14.99□□□□□ -0.01
SHMT2-232ENST00000557487 SPACA6W5XKT8 324 aa14.99□□□□□ -0.01
SHMT2-232ENST00000557487 L7N2F9 121 aa14.98□□□□□ -0.01
SHMT2-232ENST00000557487 ACOT7O00154 380 aa14.98□□□□□ -0.01
SHMT2-232ENST00000557487 CDK2AP1O14519 115 aa14.98□□□□□ -0.01
SHMT2-232ENST00000557487 KHDRBS3O75525 346 aaKnown RBP14.98□□□□□ -0.01
SHMT2-232ENST00000557487 CFDP00746 253 aaPredicted RBP14.98□□□□□ -0.01
SHMT2-232ENST00000557487 CEACAM5P06731 702 aa14.98□□□□□ -0.01
SHMT2-232ENST00000557487 DPP4P27487 766 aa14.98□□□□□ -0.01
SHMT2-232ENST00000557487 MAP3K8P41279 467 aa14.98□□□□□ -0.01
SHMT2-232ENST00000557487 SOX9P48436 509 aa14.98□□□□□ -0.01
SHMT2-232ENST00000557487 VEGFCP49767 419 aa14.98□□□□□ -0.01
SHMT2-232ENST00000557487 IL10RAQ13651 578 aa14.98□□□□□ -0.01
SHMT2-232ENST00000557487 MEIOBQ8N635 442 aa14.98□□□□□ -0.01
SHMT2-232ENST00000557487 ASB13Q8WXK3 278 aa14.98□□□□□ -0.01
SHMT2-232ENST00000557487 OR14A2Q96R54 314 aa14.98□□□□□ -0.01
SHMT2-232ENST00000557487 TNFRSF13CQ96RJ3 184 aa14.98□□□□□ -0.01
SHMT2-232ENST00000557487 NKIRAS2Q9NYR9 191 aa14.98□□□□□ -0.01
SHMT2-232ENST00000557487 ZNF281Q9Y2X9 895 aa14.98□□□□□ -0.01
SHMT2-232ENST00000557487 PRRC2BQ5JSZ5 2229 aaKnown RBP14.98□□□□□ -0.01
SHMT2-232ENST00000557487 A0A0B4J203 849 aa14.98□□□□□ -0.01
SHMT2-232ENST00000557487 OR52A4PA6NMU1 304 aa14.98□□□□□ -0.01
SHMT2-232ENST00000557487 KRBOX1C9JBD0 128 aa14.98□□□□□ -0.01
SHMT2-232ENST00000557487 GMDSO60547 372 aa14.98□□□□□ -0.01
SHMT2-232ENST00000557487 B3GALNT1O75752 331 aa14.98□□□□□ -0.01
SHMT2-232ENST00000557487 SERPINI2O75830 405 aa14.98□□□□□ -0.01
SHMT2-232ENST00000557487 RGS11O94810 467 aa14.98□□□□□ -0.01
SHMT2-232ENST00000557487 ADH1BP00325 375 aa14.98□□□□□ -0.01
SHMT2-232ENST00000557487 PTNP21246 168 aa14.98□□□□□ -0.01
SHMT2-232ENST00000557487 CALCRP30988 508 aa14.98□□□□□ -0.01
SHMT2-232ENST00000557487 FAUP35544 74 aaKnown RBP14.98□□□□□ -0.01
SHMT2-232ENST00000557487 ZNF626Q68DY1 528 aa14.98□□□□□ -0.01
SHMT2-232ENST00000557487 SLC6A19Q695T7 634 aa14.98□□□□□ -0.01
SHMT2-232ENST00000557487 SFRP4Q6FHJ7 346 aaPredicted RBP14.98□□□□□ -0.01
SHMT2-232ENST00000557487 Q6ZTK2 550 aa14.98□□□□□ -0.01
SHMT2-232ENST00000557487 SLC35F3Q8IY50 421 aa14.98□□□□□ -0.01
SHMT2-232ENST00000557487 BMPERQ8N8U9 685 aa14.98□□□□□ -0.01
SHMT2-232ENST00000557487 OR52E2Q8NGJ4 325 aa14.98□□□□□ -0.01
SHMT2-232ENST00000557487 OR52I2Q8NH67 350 aa14.98□□□□□ -0.01
SHMT2-232ENST00000557487 SPPL3Q8TCT6 385 aa14.98□□□□□ -0.01
SHMT2-232ENST00000557487 RBM18Q96H35 190 aaKnown RBP14.98□□□□□ -0.01
SHMT2-232ENST00000557487 DDOQ99489 341 aa14.98□□□□□ -0.01
SHMT2-232ENST00000557487 SLITRK2Q9H156 845 aa14.98□□□□□ -0.01
SHMT2-232ENST00000557487 OR10A4Q9H209 315 aa14.98□□□□□ -0.01
SHMT2-232ENST00000557487 SYNPO2LQ9H987 977 aa14.98□□□□□ -0.01
SHMT2-232ENST00000557487 NOX3Q9HBY0 568 aa14.98□□□□□ -0.01
SHMT2-232ENST00000557487 ADAP2Q9NPF8 381 aa14.98□□□□□ -0.01
SHMT2-232ENST00000557487 PIPOXQ9P0Z9 390 aa14.98□□□□□ -0.01
SHMT2-232ENST00000557487 NCDNQ9UBB6 729 aa14.98□□□□□ -0.01
SHMT2-232ENST00000557487 DPP7Q9UHL4 492 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms