RNA–Protein interactions for RNA: ENST00000556765.1

TRAPPC6B-206, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 3

Gene TRAPPC6B, Length 664 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-206ENST00000556765 FAM20BO75063 409 aa12.95□□□□□ -0.34
TRAPPC6B-206ENST00000556765 KLF7O75840 302 aaPredicted RBP12.95□□□□□ -0.34
TRAPPC6B-206ENST00000556765 RCBTB2O95199 551 aa12.95□□□□□ -0.34
TRAPPC6B-206ENST00000556765 LINGO3P0C6S8 592 aa12.95□□□□□ -0.34
TRAPPC6B-206ENST00000556765 GKN3PP0CG01 181 aa12.95□□□□□ -0.34
TRAPPC6B-206ENST00000556765 ABCD3P28288 659 aa12.95□□□□□ -0.34
TRAPPC6B-206ENST00000556765 FOLR3P41439 243 aa12.95□□□□□ -0.34
TRAPPC6B-206ENST00000556765 SLC26A5P58743 744 aa12.95□□□□□ -0.34
TRAPPC6B-206ENST00000556765 ADORA2A-AS1P86434 159 aa12.95□□□□□ -0.34
TRAPPC6B-206ENST00000556765 SSPNQ14714 243 aa12.95□□□□□ -0.34
TRAPPC6B-206ENST00000556765 NNATQ16517 81 aa12.95□□□□□ -0.34
TRAPPC6B-206ENST00000556765 ALG10BQ5I7T1 473 aa12.95□□□□□ -0.34
TRAPPC6B-206ENST00000556765 SLC27A4Q6P1M0 643 aa12.95□□□□□ -0.34
TRAPPC6B-206ENST00000556765 PRSS48Q7RTY5 328 aa12.95□□□□□ -0.34
TRAPPC6B-206ENST00000556765 NKAIN4Q8IVV8 208 aa12.95□□□□□ -0.34
TRAPPC6B-206ENST00000556765 ALDH16A1Q8IZ83 802 aa12.95□□□□□ -0.34
TRAPPC6B-206ENST00000556765 CYP4Z2PQ8N1L4 340 aa12.95□□□□□ -0.34
TRAPPC6B-206ENST00000556765 ZNF321PQ8N8H1 164 aa12.95□□□□□ -0.34
TRAPPC6B-206ENST00000556765 BPIFB6Q8NFQ5 453 aa12.95□□□□□ -0.34
TRAPPC6B-206ENST00000556765 OR52L1Q8NGH7 329 aa12.95□□□□□ -0.34
TRAPPC6B-206ENST00000556765 OR4C3Q8NH37 302 aa12.95□□□□□ -0.34
TRAPPC6B-206ENST00000556765 SPATA3Q8NHX4 192 aa12.95□□□□□ -0.34
TRAPPC6B-206ENST00000556765 BRIX1Q8TDN6 353 aaKnown RBP12.95□□□□□ -0.34
TRAPPC6B-206ENST00000556765 FCGR1BQ92637 280 aa12.95□□□□□ -0.34
TRAPPC6B-206ENST00000556765 TMCO6Q96DC7 493 aa12.95□□□□□ -0.34
TRAPPC6B-206ENST00000556765 NODALQ96S42 347 aa12.95□□□□□ -0.34
TRAPPC6B-206ENST00000556765 POLDIP3Q9BY77 421 aaKnown RBP12.95□□□□□ -0.34
TRAPPC6B-206ENST00000556765 TBL1XR1Q9BZK7 514 aa12.95□□□□□ -0.34
TRAPPC6B-206ENST00000556765 ZNF700Q9H0M5 742 aa12.95□□□□□ -0.34
TRAPPC6B-206ENST00000556765 CXXC4Q9H2H0 198 aa12.95□□□□□ -0.34
TRAPPC6B-206ENST00000556765 CTPS2Q9NRF8 586 aa12.95□□□□□ -0.34
TRAPPC6B-206ENST00000556765 IL20Q9NYY1 176 aa12.95□□□□□ -0.34
TRAPPC6B-206ENST00000556765 BAIAP2Q9UQB8 552 aa12.95□□□□□ -0.34
TRAPPC6B-206ENST00000556765 CDH10Q9Y6N8 788 aa12.95□□□□□ -0.34
TRAPPC6B-206ENST00000556765 NCOA6Q14686 2063 aaPredicted RBP12.94□□□□□ -0.34
TRAPPC6B-206ENST00000556765 EFCAB10A6NFE3 127 aa12.94□□□□□ -0.34
TRAPPC6B-206ENST00000556765 RGS10O43665 173 aa12.94□□□□□ -0.34
TRAPPC6B-206ENST00000556765 LYPD3O95274 346 aa12.94□□□□□ -0.34
TRAPPC6B-206ENST00000556765 CLDN14O95500 239 aa12.94□□□□□ -0.34
TRAPPC6B-206ENST00000556765 HMGN1P05114 100 aa12.94□□□□□ -0.34
TRAPPC6B-206ENST00000556765 PIPP12273 146 aaPredicted RBP12.94□□□□□ -0.34
TRAPPC6B-206ENST00000556765 GABRB1P18505 474 aa12.94□□□□□ -0.34
TRAPPC6B-206ENST00000556765 POU1F1P28069 291 aa12.94□□□□□ -0.34
TRAPPC6B-206ENST00000556765 EPHA2P29317 976 aa12.94□□□□□ -0.34
TRAPPC6B-206ENST00000556765 GIPRP48546 466 aa12.94□□□□□ -0.34
TRAPPC6B-206ENST00000556765 SLC9A3P48764 834 aa12.94□□□□□ -0.34
TRAPPC6B-206ENST00000556765 SUMO3P55854 103 aaPredicted RBP12.94□□□□□ -0.34
TRAPPC6B-206ENST00000556765 SLC35A2P78381 396 aa12.94□□□□□ -0.34
TRAPPC6B-206ENST00000556765 CDK5Q00535 292 aa12.94□□□□□ -0.34
TRAPPC6B-206ENST00000556765 SKP2Q13309 424 aa12.94□□□□□ -0.34
TRAPPC6B-206ENST00000556765 CDSNQ15517 529 aa12.94□□□□□ -0.34
TRAPPC6B-206ENST00000556765 OCLNQ16625 522 aa12.94□□□□□ -0.34
TRAPPC6B-206ENST00000556765 ANKDD1AQ495B1 522 aa12.94□□□□□ -0.34
TRAPPC6B-206ENST00000556765 LINC00114Q6XXX2 140 aa12.94□□□□□ -0.34
TRAPPC6B-206ENST00000556765 ZNF620Q6ZNG0 422 aa12.94□□□□□ -0.34
TRAPPC6B-206ENST00000556765 PTCHD4Q6ZW05 846 aa12.94□□□□□ -0.34
TRAPPC6B-206ENST00000556765 GPR141Q7Z602 305 aa12.94□□□□□ -0.34
TRAPPC6B-206ENST00000556765 CCDC71Q8IV32 467 aaPredicted RBP12.94□□□□□ -0.34
TRAPPC6B-206ENST00000556765 NRMQ8IXM6 262 aa12.94□□□□□ -0.34
TRAPPC6B-206ENST00000556765 ZNF540Q8NDQ6 660 aa12.94□□□□□ -0.34
TRAPPC6B-206ENST00000556765 CNIH3Q8TBE1 160 aa12.94□□□□□ -0.34
TRAPPC6B-206ENST00000556765 M1APQ8TC57 530 aa12.94□□□□□ -0.34
TRAPPC6B-206ENST00000556765 PHOSPHO1Q8TCT1 267 aa12.94□□□□□ -0.34
TRAPPC6B-206ENST00000556765 TMEM255BQ8WV15 326 aa12.94□□□□□ -0.34
TRAPPC6B-206ENST00000556765 DGCR14Q96DF8 476 aaKnown RBP12.94□□□□□ -0.34
TRAPPC6B-206ENST00000556765 ADOQ96SZ5 270 aa12.94□□□□□ -0.34
TRAPPC6B-206ENST00000556765 NDEL1Q9GZM8 345 aa12.94□□□□□ -0.34
TRAPPC6B-206ENST00000556765 ZNF223Q9UK11 482 aaPredicted RBP12.94□□□□□ -0.34
TRAPPC6B-206ENST00000556765 NPFFR2Q9Y5X5 522 aa12.94□□□□□ -0.34
TRAPPC6B-206ENST00000556765 FN1P02751 2386 aaKnown RBP12.94□□□□□ -0.34
TRAPPC6B-206ENST00000556765 A0A087WUJ7 227 aa12.93□□□□□ -0.34
TRAPPC6B-206ENST00000556765 TRBV11-1A0A0K0K1C0 115 aa12.93□□□□□ -0.34
TRAPPC6B-206ENST00000556765 UNC119BA6NIH7 251 aa12.93□□□□□ -0.34
TRAPPC6B-206ENST00000556765 CLCA1A8K7I4 914 aa12.93□□□□□ -0.34
TRAPPC6B-206ENST00000556765 NDUFB5O43674 189 aa12.93□□□□□ -0.34
TRAPPC6B-206ENST00000556765 CDC40O60508 579 aaKnown RBP eCLIP12.93□□□□□ -0.34
TRAPPC6B-206ENST00000556765 HCN1O60741 890 aa12.93□□□□□ -0.34
TRAPPC6B-206ENST00000556765 ICOSLGO75144 302 aa12.93□□□□□ -0.34
TRAPPC6B-206ENST00000556765 CNOT3O75175 753 aaKnown RBP12.93□□□□□ -0.34
TRAPPC6B-206ENST00000556765 BCAS1O75363 584 aaPredicted RBP12.93□□□□□ -0.34
TRAPPC6B-206ENST00000556765 WBP4O75554 376 aaKnown RBP12.93□□□□□ -0.34
TRAPPC6B-206ENST00000556765 THY1P04216 161 aa12.93□□□□□ -0.34
TRAPPC6B-206ENST00000556765 TP53P04637 393 aaPredicted RBP12.93□□□□□ -0.34
TRAPPC6B-206ENST00000556765 ICAM2P13598 275 aa12.93□□□□□ -0.34
TRAPPC6B-206ENST00000556765 PRG2P13727 222 aa12.93□□□□□ -0.34
TRAPPC6B-206ENST00000556765 BMP7P18075 431 aa12.93□□□□□ -0.34
TRAPPC6B-206ENST00000556765 PGCP20142 388 aa12.93□□□□□ -0.34
TRAPPC6B-206ENST00000556765 HOXC5Q00444 222 aa12.93□□□□□ -0.34
TRAPPC6B-206ENST00000556765 PLAURQ03405 335 aa12.93□□□□□ -0.34
TRAPPC6B-206ENST00000556765 FOXD4Q12950 439 aaPredicted RBP12.93□□□□□ -0.34
TRAPPC6B-206ENST00000556765 AIMP2Q13155 320 aaKnown RBP12.93□□□□□ -0.34
TRAPPC6B-206ENST00000556765 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.93□□□□□ -0.34
TRAPPC6B-206ENST00000556765 ZBED5Q49AG3 693 aa12.93□□□□□ -0.34
TRAPPC6B-206ENST00000556765 AGAP7PQ5VUJ5 663 aa12.93□□□□□ -0.34
TRAPPC6B-206ENST00000556765 PLAG1Q6DJT9 500 aa12.93□□□□□ -0.34
TRAPPC6B-206ENST00000556765 FAAH2Q6GMR7 532 aa12.93□□□□□ -0.34
TRAPPC6B-206ENST00000556765 RPUSD3Q6P087 351 aaKnown RBP12.93□□□□□ -0.34
TRAPPC6B-206ENST00000556765 C5orf46Q6UWT4 87 aa12.93□□□□□ -0.34
TRAPPC6B-206ENST00000556765 MEX3BQ6ZN04 569 aaKnown RBP12.93□□□□□ -0.34
TRAPPC6B-206ENST00000556765 SHISA6Q6ZSJ9 500 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms