RNA–Protein interactions for RNA: ENST00000556718.1

PRPF39-210, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-210ENST00000556718 IKZF5Q9H5V7 419 aa3.36□□□□□ -1.87
PRPF39-210ENST00000556718 AZI2Q9H6S1 392 aa3.36□□□□□ -1.87
PRPF39-210ENST00000556718 POPDC2Q9HBU9 364 aa3.36□□□□□ -1.87
PRPF39-210ENST00000556718 VCX3AQ9NNX9 186 aa3.36□□□□□ -1.87
PRPF39-210ENST00000556718 CLEC5AQ9NY25 188 aa3.36□□□□□ -1.87
PRPF39-210ENST00000556718 SPATA7Q9P0W8 599 aa3.36□□□□□ -1.87
PRPF39-210ENST00000556718 SPRR3Q9UBC9 169 aa3.36□□□□□ -1.87
PRPF39-210ENST00000556718 KLK13Q9UKR3 277 aa3.36□□□□□ -1.87
PRPF39-210ENST00000556718 CFAP45Q9UL16 551 aa3.36□□□□□ -1.87
PRPF39-210ENST00000556718 TMCO1Q9UM00 188 aa3.36□□□□□ -1.87
PRPF39-210ENST00000556718 CA5BQ9Y2D0 317 aa3.36□□□□□ -1.87
PRPF39-210ENST00000556718 PLLPQ9Y342 182 aa3.36□□□□□ -1.87
PRPF39-210ENST00000556718 PLXNC1O60486 1568 aa3.36□□□□□ -1.87
PRPF39-210ENST00000556718 PIK3C2GO75747 1445 aa3.36□□□□□ -1.87
PRPF39-210ENST00000556718 CCDC141Q6ZP82 1450 aa3.35□□□□□ -1.87
PRPF39-210ENST00000556718 RALGAPBQ86X10 1494 aa3.35□□□□□ -1.87
PRPF39-210ENST00000556718 KDM5DQ9BY66 1539 aa3.35□□□□□ -1.87
PRPF39-210ENST00000556718 TDRD15B5MCY1 1934 aaKnown RBP3.35□□□□□ -1.87
PRPF39-210ENST00000556718 A0A1W2PPR1 153 aa3.35□□□□□ -1.87
PRPF39-210ENST00000556718 BTBD17A6NE02 478 aa3.35□□□□□ -1.87
PRPF39-210ENST00000556718 ZNF716A6NP11 495 aa3.35□□□□□ -1.87
PRPF39-210ENST00000556718 TMEM110-MUSTN1A8MSY1 372 aa3.35□□□□□ -1.87
PRPF39-210ENST00000556718 TRDCB7Z8K6 153 aa3.35□□□□□ -1.87
PRPF39-210ENST00000556718 HIP1O00291 1037 aa3.35□□□□□ -1.87
PRPF39-210ENST00000556718 NDUFAB1O14561 156 aa3.35□□□□□ -1.87
PRPF39-210ENST00000556718 CXCL13O43927 109 aa3.35□□□□□ -1.87
PRPF39-210ENST00000556718 PFKFB2O60825 505 aa3.35□□□□□ -1.87
PRPF39-210ENST00000556718 SHOX2O60902 331 aaPredicted RBP3.35□□□□□ -1.87
PRPF39-210ENST00000556718 GPX5O75715 221 aa3.35□□□□□ -1.87
PRPF39-210ENST00000556718 ATP5LO75964 103 aa3.35□□□□□ -1.87
PRPF39-210ENST00000556718 GNA14O95837 355 aa3.35□□□□□ -1.87
PRPF39-210ENST00000556718 LALBAP00709 142 aa3.35□□□□□ -1.87
PRPF39-210ENST00000556718 ZNF735P0CB33 412 aa3.35□□□□□ -1.87
PRPF39-210ENST00000556718 POLR2EP19388 210 aaKnown RBP3.35□□□□□ -1.87
PRPF39-210ENST00000556718 CCR1P32246 355 aa3.35□□□□□ -1.87
PRPF39-210ENST00000556718 MAP3K8P41279 467 aa3.35□□□□□ -1.87
PRPF39-210ENST00000556718 GYG1P46976 350 aa3.35□□□□□ -1.87
PRPF39-210ENST00000556718 CCNHP51946 323 aaPredicted RBP3.35□□□□□ -1.87
PRPF39-210ENST00000556718 HNRNPA3P51991 378 aaKnown RBP3.35□□□□□ -1.87
PRPF39-210ENST00000556718 PLK1P53350 603 aa3.35□□□□□ -1.87
PRPF39-210ENST00000556718 ATP1B3P54709 279 aa3.35□□□□□ -1.87
PRPF39-210ENST00000556718 GNG11P61952 73 aa3.35□□□□□ -1.87
PRPF39-210ENST00000556718 PAX2Q02962 417 aa3.35□□□□□ -1.87
PRPF39-210ENST00000556718 ZFP36L1Q07352 338 aaKnown RBP3.35□□□□□ -1.87
PRPF39-210ENST00000556718 ASPHQ12797 758 aa3.35□□□□□ -1.87
PRPF39-210ENST00000556718 MRPL28Q13084 256 aaKnown RBP3.35□□□□□ -1.87
PRPF39-210ENST00000556718 IDI1Q13907 227 aa3.35□□□□□ -1.87
PRPF39-210ENST00000556718 PPP1R7Q15435 360 aa3.35□□□□□ -1.87
PRPF39-210ENST00000556718 SLC15A2Q16348 729 aa3.35□□□□□ -1.87
PRPF39-210ENST00000556718 CFAP221Q4G0U5 840 aa3.35□□□□□ -1.87
PRPF39-210ENST00000556718 C6orf226Q5I0X4 101 aa3.35□□□□□ -1.87
PRPF39-210ENST00000556718 ARMC12Q5T9G4 340 aa3.35□□□□□ -1.87
PRPF39-210ENST00000556718 SLC22A10Q63ZE4 541 aa3.35□□□□□ -1.87
PRPF39-210ENST00000556718 SPINK14Q6IE38 97 aa3.35□□□□□ -1.87
PRPF39-210ENST00000556718 FAM199XQ6PEV8 388 aaPredicted RBP3.35□□□□□ -1.87
PRPF39-210ENST00000556718 DNM1P46Q6ZS02 220 aa3.35□□□□□ -1.87
PRPF39-210ENST00000556718 PAQR7Q86WK9 346 aa3.35□□□□□ -1.87
PRPF39-210ENST00000556718 OR1L4Q8NGR5 311 aa3.35□□□□□ -1.87
PRPF39-210ENST00000556718 RAPGEF5Q92565 580 aa3.35□□□□□ -1.87
PRPF39-210ENST00000556718 UBE2E3Q969T4 207 aa3.35□□□□□ -1.87
PRPF39-210ENST00000556718 FAF2Q96CS3 445 aa3.35□□□□□ -1.87
PRPF39-210ENST00000556718 TIMD4Q96H15 378 aa3.35□□□□□ -1.87
PRPF39-210ENST00000556718 CELF6Q96J87 481 aaKnown RBP3.35□□□□□ -1.87
PRPF39-210ENST00000556718 SERAC1Q96JX3 654 aa3.35□□□□□ -1.87
PRPF39-210ENST00000556718 IL4I1Q96RQ9 567 aa3.35□□□□□ -1.87
PRPF39-210ENST00000556718 DPH7Q9BTV6 452 aa3.35□□□□□ -1.87
PRPF39-210ENST00000556718 FAM192AQ9GZU8 254 aa3.35□□□□□ -1.87
PRPF39-210ENST00000556718 ISG20L2Q9H9L3 353 aaKnown RBP3.35□□□□□ -1.87
PRPF39-210ENST00000556718 SLC2A8Q9NY64 477 aa3.35□□□□□ -1.87
PRPF39-210ENST00000556718 PAK5Q9P286 719 aa3.35□□□□□ -1.87
PRPF39-210ENST00000556718 WARS2Q9UGM6 360 aaKnown RBP3.35□□□□□ -1.87
PRPF39-210ENST00000556718 PAIP2BQ9ULR5 123 aaKnown RBP3.35□□□□□ -1.87
PRPF39-210ENST00000556718 IFT52Q9Y366 437 aa3.35□□□□□ -1.87
PRPF39-210ENST00000556718 SYNRGQ9UMZ2 1314 aa3.35□□□□□ -1.87
PRPF39-210ENST00000556718 GAPVD1Q14C86 1478 aa3.35□□□□□ -1.87
PRPF39-210ENST00000556718 EFCAB5A4FU69 1503 aa3.34□□□□□ -1.87
PRPF39-210ENST00000556718 ABCC2Q92887 1545 aa3.34□□□□□ -1.87
PRPF39-210ENST00000556718 ARHGEF12Q9NZN5 1544 aa3.34□□□□□ -1.87
PRPF39-210ENST00000556718 KIF14Q15058 1648 aa3.34□□□□□ -1.87
PRPF39-210ENST00000556718 KIF21AQ7Z4S6 1674 aa3.34□□□□□ -1.87
PRPF39-210ENST00000556718 CFAP43Q8NDM7 1665 aa3.34□□□□□ -1.87
PRPF39-210ENST00000556718 LOC100131303A0A0U1RQF7 123 aa3.34□□□□□ -1.87
PRPF39-210ENST00000556718 IQANK1A0A1B0GTG1 560 aa3.34□□□□□ -1.87
PRPF39-210ENST00000556718 HEATR9A2RTY3 570 aa3.34□□□□□ -1.87
PRPF39-210ENST00000556718 CCDC182A6NF36 153 aa3.34□□□□□ -1.87
PRPF39-210ENST00000556718 A8MXQ7 604 aa3.34□□□□□ -1.87
PRPF39-210ENST00000556718 DUSP14O95147 198 aaKnown RBP3.34□□□□□ -1.87
PRPF39-210ENST00000556718 VENTXO95231 258 aa3.34□□□□□ -1.87
PRPF39-210ENST00000556718 LGALS2P05162 132 aa3.34□□□□□ -1.87
PRPF39-210ENST00000556718 SLC35E2P0CK97 266 aa3.34□□□□□ -1.87
PRPF39-210ENST00000556718 COX5AP20674 150 aa3.34□□□□□ -1.87
PRPF39-210ENST00000556718 CHMLP26374 656 aa3.34□□□□□ -1.87
PRPF39-210ENST00000556718 DUSP3P51452 185 aaPredicted RBP3.34□□□□□ -1.87
PRPF39-210ENST00000556718 SLC25A1P53007 311 aa3.34□□□□□ -1.87
PRPF39-210ENST00000556718 HSPA2P54652 639 aa3.34□□□□□ -1.87
PRPF39-210ENST00000556718 PKNOX1P55347 436 aa3.34□□□□□ -1.87
PRPF39-210ENST00000556718 CCNA1P78396 465 aa3.34□□□□□ -1.87
PRPF39-210ENST00000556718 OC90Q02509 493 aaPredicted RBP3.34□□□□□ -1.87
PRPF39-210ENST00000556718 BST1Q10588 318 aa3.34□□□□□ -1.87
PRPF39-210ENST00000556718 KLRB1Q12918 225 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms