RNA–Protein interactions for RNA: ENST00000556433.5

ACTN1-220, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-220ENST00000556433 SLC9A8Q9Y2E8 581 aa19.88■□□□□ 0.77
ACTN1-220ENST00000556433 FLVCR1Q9Y5Y0 555 aa19.88■□□□□ 0.77
ACTN1-220ENST00000556433 ANP32DO95626 131 aa19.87■□□□□ 0.77
ACTN1-220ENST00000556433 THBS1P07996 1170 aa19.87■□□□□ 0.77
ACTN1-220ENST00000556433 ITGA5P08648 1049 aa19.87■□□□□ 0.77
ACTN1-220ENST00000556433 GKN3PP0CG01 181 aa19.87■□□□□ 0.77
ACTN1-220ENST00000556433 PTAFRP25105 342 aa19.87■□□□□ 0.77
ACTN1-220ENST00000556433 CD40P25942 277 aa19.87■□□□□ 0.77
ACTN1-220ENST00000556433 CRATP43155 626 aa19.87■□□□□ 0.77
ACTN1-220ENST00000556433 SLC17A1Q14916 467 aa19.87■□□□□ 0.77
ACTN1-220ENST00000556433 C9orf135Q5VTT2 229 aa19.87■□□□□ 0.77
ACTN1-220ENST00000556433 AGAP6Q5VW22 663 aa19.87■□□□□ 0.77
ACTN1-220ENST00000556433 SLC22A25Q6T423 547 aa19.87■□□□□ 0.77
ACTN1-220ENST00000556433 VRK2Q86Y07 508 aa19.87■□□□□ 0.77
ACTN1-220ENST00000556433 OR52P1PQ8NH57 321 aa19.87■□□□□ 0.77
ACTN1-220ENST00000556433 C1QTNF6Q9BXI9 259 aa19.87■□□□□ 0.77
ACTN1-220ENST00000556433 MANSC1Q9H8J5 431 aa19.87■□□□□ 0.77
ACTN1-220ENST00000556433 BARX1Q9HBU1 254 aaPredicted RBP19.87■□□□□ 0.77
ACTN1-220ENST00000556433 P2RX2Q9UBL9 471 aa19.87■□□□□ 0.77
ACTN1-220ENST00000556433 POU2F3Q9UKI9 436 aa19.87■□□□□ 0.77
ACTN1-220ENST00000556433 B3GALT5Q9Y2C3 310 aa19.87■□□□□ 0.77
ACTN1-220ENST00000556433 ALPK2Q86TB3 2170 aa19.86■□□□□ 0.77
ACTN1-220ENST00000556433 CDHR4A6H8M9 788 aa19.86■□□□□ 0.77
ACTN1-220ENST00000556433 KIAA1324LA8MWY0 1029 aaPredicted RBP19.86■□□□□ 0.77
ACTN1-220ENST00000556433 E7EQL1 145 aa19.86■□□□□ 0.77
ACTN1-220ENST00000556433 M0R1B8 84 aa19.86■□□□□ 0.77
ACTN1-220ENST00000556433 ETFAP13804 333 aa19.86■□□□□ 0.77
ACTN1-220ENST00000556433 CXCR1P25024 350 aa19.86■□□□□ 0.77
ACTN1-220ENST00000556433 MVDP53602 400 aa19.86■□□□□ 0.77
ACTN1-220ENST00000556433 KRTAP1-1Q07627 177 aa19.86■□□□□ 0.77
ACTN1-220ENST00000556433 CEACAM7Q14002 265 aa19.86■□□□□ 0.77
ACTN1-220ENST00000556433 SLC9B1Q4ZJI4 515 aa19.86■□□□□ 0.77
ACTN1-220ENST00000556433 OTUD3Q5T2D3 398 aaPredicted RBP19.86■□□□□ 0.77
ACTN1-220ENST00000556433 PAQR6Q6TCH4 344 aa19.86■□□□□ 0.77
ACTN1-220ENST00000556433 DEPDC4Q8N2C3 294 aa19.86■□□□□ 0.77
ACTN1-220ENST00000556433 MAELQ96JY0 434 aaKnown RBP19.86■□□□□ 0.77
ACTN1-220ENST00000556433 SLC7A10Q9NS82 523 aa19.86■□□□□ 0.77
ACTN1-220ENST00000556433 NKIRAS1Q9NYS0 192 aa19.86■□□□□ 0.77
ACTN1-220ENST00000556433 CALML5Q9NZT1 146 aa19.86■□□□□ 0.77
ACTN1-220ENST00000556433 PDLIM1O00151 329 aa19.85■□□□□ 0.77
ACTN1-220ENST00000556433 TFPTP0C1Z6 253 aa19.85■□□□□ 0.77
ACTN1-220ENST00000556433 ZCCHC18P0CG32 403 aa19.85■□□□□ 0.77
ACTN1-220ENST00000556433 TTKP33981 857 aa19.85■□□□□ 0.77
ACTN1-220ENST00000556433 ACAA2P42765 397 aaKnown RBP19.85■□□□□ 0.77
ACTN1-220ENST00000556433 OR7A5Q15622 319 aa19.85■□□□□ 0.77
ACTN1-220ENST00000556433 LIN52Q52LA3 116 aa19.85■□□□□ 0.77
ACTN1-220ENST00000556433 TSPO2Q5TGU0 170 aa19.85■□□□□ 0.77
ACTN1-220ENST00000556433 ZNF836Q6ZNA1 936 aa19.85■□□□□ 0.77
ACTN1-220ENST00000556433 CADM2Q8N3J6 435 aa19.85■□□□□ 0.77
ACTN1-220ENST00000556433 TMEM99Q8N816 258 aa19.85■□□□□ 0.77
ACTN1-220ENST00000556433 WDR31Q8NA23 367 aa19.85■□□□□ 0.77
ACTN1-220ENST00000556433 SLC38A5Q8WUX1 472 aa19.85■□□□□ 0.77
ACTN1-220ENST00000556433 DHRS9Q9BPW9 319 aa19.85■□□□□ 0.77
ACTN1-220ENST00000556433 RMND5AQ9H871 391 aa19.85■□□□□ 0.77
ACTN1-220ENST00000556433 TPT1P8Q9HAU6 139 aa19.85■□□□□ 0.77
ACTN1-220ENST00000556433 ZIM2Q9NZV7 527 aa19.85■□□□□ 0.77
ACTN1-220ENST00000556433 DCTN4Q9UJW0 460 aa19.85■□□□□ 0.77
ACTN1-220ENST00000556433 PRDM4Q9UKN5 801 aa19.85■□□□□ 0.77
ACTN1-220ENST00000556433 LIPT2A6NK58 231 aa19.84■□□□□ 0.77
ACTN1-220ENST00000556433 SSX4O60224 188 aa19.84■□□□□ 0.77
ACTN1-220ENST00000556433 AKR7A3O95154 331 aa19.84■□□□□ 0.77
ACTN1-220ENST00000556433 BCHEP06276 602 aa19.84■□□□□ 0.77
ACTN1-220ENST00000556433 GPIP06744 558 aa19.84■□□□□ 0.77
ACTN1-220ENST00000556433 CRISP3P54108 245 aa19.84■□□□□ 0.77
ACTN1-220ENST00000556433 SLC18A1P54219 525 aa19.84■□□□□ 0.77
ACTN1-220ENST00000556433 DSTNP60981 165 aa19.84■□□□□ 0.77
ACTN1-220ENST00000556433 MAGOHP61326 146 aaKnown RBP19.84■□□□□ 0.77
ACTN1-220ENST00000556433 COPZ1P61923 177 aa19.84■□□□□ 0.77
ACTN1-220ENST00000556433 DMTNQ08495 405 aa19.84■□□□□ 0.77
ACTN1-220ENST00000556433 SPOCK1Q08629 439 aa19.84■□□□□ 0.77
ACTN1-220ENST00000556433 WBP2NLQ6ICG8 309 aa19.84■□□□□ 0.77
ACTN1-220ENST00000556433 DNM1P46Q6ZS02 220 aa19.84■□□□□ 0.77
ACTN1-220ENST00000556433 ITCHQ96J02 903 aa19.84■□□□□ 0.77
ACTN1-220ENST00000556433 ADAD1Q96M93 576 aaKnown RBP19.84■□□□□ 0.77
ACTN1-220ENST00000556433 SDR39U1Q9NRG7 319 aaPredicted RBP19.84■□□□□ 0.77
ACTN1-220ENST00000556433 ZNF232Q9UNY5 417 aa19.84■□□□□ 0.77
ACTN1-220ENST00000556433 DSPPQ9NZW4 1301 aa19.83■□□□□ 0.77
ACTN1-220ENST00000556433 UBDO15205 165 aa19.83■□□□□ 0.77
ACTN1-220ENST00000556433 TP53P04637 393 aaPredicted RBP19.83■□□□□ 0.77
ACTN1-220ENST00000556433 TGFBR3Q03167 851 aa19.83■□□□□ 0.77
ACTN1-220ENST00000556433 BNIP2Q12982 314 aa19.83■□□□□ 0.77
ACTN1-220ENST00000556433 LARS2Q15031 903 aaKnown RBP19.83■□□□□ 0.77
ACTN1-220ENST00000556433 NRF1Q16656 503 aa19.83■□□□□ 0.77
ACTN1-220ENST00000556433 GTDC1Q4AE62 458 aa19.83■□□□□ 0.77
ACTN1-220ENST00000556433 AAED1Q7RTV5 226 aa19.83■□□□□ 0.77
ACTN1-220ENST00000556433 MAVSQ7Z434 540 aa19.83■□□□□ 0.77
ACTN1-220ENST00000556433 FBXL14Q8N1E6 418 aa19.83■□□□□ 0.77
ACTN1-220ENST00000556433 CLIP4Q8N3C7 705 aa19.83■□□□□ 0.77
ACTN1-220ENST00000556433 ZIC4Q8N9L1 334 aa19.83■□□□□ 0.77
ACTN1-220ENST00000556433 OR9K2Q8NGE7 335 aa19.83■□□□□ 0.77
ACTN1-220ENST00000556433 TMEM45BQ96B21 275 aa19.83■□□□□ 0.77
ACTN1-220ENST00000556433 OR52B2Q96RD2 323 aa19.83■□□□□ 0.77
ACTN1-220ENST00000556433 SF3B5Q9BWJ5 86 aaKnown RBP19.83■□□□□ 0.77
ACTN1-220ENST00000556433 CACNG6Q9BXT2 260 aa19.83■□□□□ 0.77
ACTN1-220ENST00000556433 AMBRA1Q9C0C7 1298 aa19.83■□□□□ 0.77
ACTN1-220ENST00000556433 SLC17A5Q9NRA2 495 aa19.83■□□□□ 0.77
ACTN1-220ENST00000556433 CBLN4Q9NTU7 201 aa19.83■□□□□ 0.77
ACTN1-220ENST00000556433 ZNF443Q9Y2A4 671 aaPredicted RBP19.83■□□□□ 0.77
ACTN1-220ENST00000556433 PLCE1Q9P212 2302 aa19.82■□□□□ 0.76
ACTN1-220ENST00000556433 TMEM247A6NEH6 219 aa19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms