RNA–Protein interactions for RNA: ENST00000556310.1

SLIRP-205, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-205ENST00000556310 EIF1BO60739 113 aaKnown RBP10.25□□□□□ -0.77
SLIRP-205ENST00000556310 SERPINB7O75635 380 aa10.25□□□□□ -0.77
SLIRP-205ENST00000556310 NPPAP01160 153 aa10.25□□□□□ -0.77
SLIRP-205ENST00000556310 IMPDH2P12268 514 aa10.25□□□□□ -0.77
SLIRP-205ENST00000556310 PCGF2P35227 344 aa10.25□□□□□ -0.77
SLIRP-205ENST00000556310 OR2B6P58173 313 aa10.25□□□□□ -0.77
SLIRP-205ENST00000556310 SLC35A1P78382 337 aa10.25□□□□□ -0.77
SLIRP-205ENST00000556310 CYLC2Q14093 348 aaPredicted RBP10.25□□□□□ -0.77
SLIRP-205ENST00000556310 PDK3Q15120 406 aa10.25□□□□□ -0.77
SLIRP-205ENST00000556310 MMEL1Q495T6 779 aa10.25□□□□□ -0.77
SLIRP-205ENST00000556310 STAC2Q6ZMT1 411 aa10.25□□□□□ -0.77
SLIRP-205ENST00000556310 ATG4DQ86TL0 474 aaPredicted RBP10.25□□□□□ -0.77
SLIRP-205ENST00000556310 COMTD1Q86VU5 262 aa10.25□□□□□ -0.77
SLIRP-205ENST00000556310 ARMC8Q8IUR7 673 aa10.25□□□□□ -0.77
SLIRP-205ENST00000556310 OR8J3Q8NGG0 315 aa10.25□□□□□ -0.77
SLIRP-205ENST00000556310 RNF217Q8TC41 542 aa10.25□□□□□ -0.77
SLIRP-205ENST00000556310 DNAJA3Q96EY1 480 aa10.25□□□□□ -0.77
SLIRP-205ENST00000556310 ZNF300Q96RE9 604 aaPredicted RBP10.25□□□□□ -0.77
SLIRP-205ENST00000556310 SH3GL1Q99961 368 aa10.25□□□□□ -0.77
SLIRP-205ENST00000556310 MED18Q9BUE0 208 aa10.25□□□□□ -0.77
SLIRP-205ENST00000556310 RSPO3Q9BXY4 272 aaPredicted RBP10.25□□□□□ -0.77
SLIRP-205ENST00000556310 POLDIP3Q9BY77 421 aaKnown RBP10.25□□□□□ -0.77
SLIRP-205ENST00000556310 POTEKPQ9BYX7 375 aa10.25□□□□□ -0.77
SLIRP-205ENST00000556310 EVA1AQ9H8M9 152 aa10.25□□□□□ -0.77
SLIRP-205ENST00000556310 KLHL28Q9NXS3 571 aa10.25□□□□□ -0.77
SLIRP-205ENST00000556310 EMC3Q9P0I2 261 aa10.25□□□□□ -0.77
SLIRP-205ENST00000556310 TESQ9UGI8 421 aaKnown RBP10.25□□□□□ -0.77
SLIRP-205ENST00000556310 ZNF716A6NP11 495 aa10.24□□□□□ -0.77
SLIRP-205ENST00000556310 A8MVM7 634 aa10.24□□□□□ -0.77
SLIRP-205ENST00000556310 CASKO14936 926 aa10.24□□□□□ -0.77
SLIRP-205ENST00000556310 TPST1O60507 370 aa10.24□□□□□ -0.77
SLIRP-205ENST00000556310 MFN2O95140 757 aa10.24□□□□□ -0.77
SLIRP-205ENST00000556310 HRGP04196 525 aa10.24□□□□□ -0.77
SLIRP-205ENST00000556310 PPP3CBP16298 524 aa10.24□□□□□ -0.77
SLIRP-205ENST00000556310 PSMB1P20618 241 aaKnown RBP10.24□□□□□ -0.77
SLIRP-205ENST00000556310 IDUAP35475 653 aa10.24□□□□□ -0.77
SLIRP-205ENST00000556310 OR3A2P47893 321 aa10.24□□□□□ -0.77
SLIRP-205ENST00000556310 SLC16A1P53985 500 aa10.24□□□□□ -0.77
SLIRP-205ENST00000556310 RGS8P57771 180 aaPredicted RBP10.24□□□□□ -0.77
SLIRP-205ENST00000556310 NCALDP61601 193 aa10.24□□□□□ -0.77
SLIRP-205ENST00000556310 H3F3AP84243 136 aa10.24□□□□□ -0.77
SLIRP-205ENST00000556310 HOXC5Q00444 222 aa10.24□□□□□ -0.77
SLIRP-205ENST00000556310 GLIPR1L2Q4G1C9 344 aa10.24□□□□□ -0.77
SLIRP-205ENST00000556310 NANOGP8Q6NSW7 305 aa10.24□□□□□ -0.77
SLIRP-205ENST00000556310 PAQR6Q6TCH4 344 aa10.24□□□□□ -0.77
SLIRP-205ENST00000556310 C6orf89Q6UWU4 347 aa10.24□□□□□ -0.77
SLIRP-205ENST00000556310 SPATA21Q7Z572 469 aa10.24□□□□□ -0.77
SLIRP-205ENST00000556310 GALNT5Q7Z7M9 940 aa10.24□□□□□ -0.77
SLIRP-205ENST00000556310 PATL1Q86TB9 770 aaKnown RBP10.24□□□□□ -0.77
SLIRP-205ENST00000556310 CDC20BQ86Y33 519 aa10.24□□□□□ -0.77
SLIRP-205ENST00000556310 GABRG1Q8N1C3 465 aa10.24□□□□□ -0.77
SLIRP-205ENST00000556310 LSMEM1Q8N8F7 131 aa10.24□□□□□ -0.77
SLIRP-205ENST00000556310 PCYOX1LQ8NBM8 494 aa10.24□□□□□ -0.77
SLIRP-205ENST00000556310 OR10A6Q8NH74 314 aa10.24□□□□□ -0.77
SLIRP-205ENST00000556310 LRRC58Q96CX6 371 aa10.24□□□□□ -0.77
SLIRP-205ENST00000556310 WFIKKN1Q96NZ8 548 aa10.24□□□□□ -0.77
SLIRP-205ENST00000556310 GRIP2Q9C0E4 1043 aa10.24□□□□□ -0.77
SLIRP-205ENST00000556310 KLHL4Q9C0H6 718 aa10.24□□□□□ -0.77
SLIRP-205ENST00000556310 OR10A4Q9H209 315 aa10.24□□□□□ -0.77
SLIRP-205ENST00000556310 NANOGQ9H9S0 305 aa10.24□□□□□ -0.77
SLIRP-205ENST00000556310 C12orf10Q9HB07 376 aa10.24□□□□□ -0.77
SLIRP-205ENST00000556310 ZNF226Q9NYT6 803 aa10.24□□□□□ -0.77
SLIRP-205ENST00000556310 ARMCX1Q9P291 453 aa10.24□□□□□ -0.77
SLIRP-205ENST00000556310 SLC13A4Q9UKG4 626 aa10.24□□□□□ -0.77
SLIRP-205ENST00000556310 CELSR1Q9NYQ6 3014 aa10.23□□□□□ -0.77
SLIRP-205ENST00000556310 A0A1B0GWA3 101 aa10.23□□□□□ -0.77
SLIRP-205ENST00000556310 LIPT2A6NK58 231 aa10.23□□□□□ -0.77
SLIRP-205ENST00000556310 ZNF814B7Z6K7 855 aa10.23□□□□□ -0.77
SLIRP-205ENST00000556310 GPR171O14626 319 aa10.23□□□□□ -0.77
SLIRP-205ENST00000556310 CCDC22O60826 627 aa10.23□□□□□ -0.77
SLIRP-205ENST00000556310 NPIPB7O75200 414 aa10.23□□□□□ -0.77
SLIRP-205ENST00000556310 GCM2O75603 506 aaPredicted RBP10.23□□□□□ -0.77
SLIRP-205ENST00000556310 GPIP06744 558 aa10.23□□□□□ -0.77
SLIRP-205ENST00000556310 FPR1P21462 350 aa10.23□□□□□ -0.77
SLIRP-205ENST00000556310 CRYGSP22914 178 aa10.23□□□□□ -0.77
SLIRP-205ENST00000556310 HTR2AP28223 471 aa10.23□□□□□ -0.77
SLIRP-205ENST00000556310 GZMMP51124 257 aa10.23□□□□□ -0.77
SLIRP-205ENST00000556310 DMTNQ08495 405 aa10.23□□□□□ -0.77
SLIRP-205ENST00000556310 BNIP2Q12982 314 aa10.23□□□□□ -0.77
SLIRP-205ENST00000556310 VMACQ2NL98 169 aa10.23□□□□□ -0.77
SLIRP-205ENST00000556310 RABL3Q5HYI8 236 aa10.23□□□□□ -0.77
SLIRP-205ENST00000556310 INTS11Q5TA45 600 aaKnown RBP10.23□□□□□ -0.77
SLIRP-205ENST00000556310 C1orf140Q5VVS0 124 aa10.23□□□□□ -0.77
SLIRP-205ENST00000556310 FBXW10Q5XX13 1052 aa10.23□□□□□ -0.77
SLIRP-205ENST00000556310 LSRQ86X29 649 aaPredicted RBP10.23□□□□□ -0.77
SLIRP-205ENST00000556310 CALHM3Q86XJ0 350 aa10.23□□□□□ -0.77
SLIRP-205ENST00000556310 STK35Q8TDR2 534 aa10.23□□□□□ -0.77
SLIRP-205ENST00000556310 NAA11Q9BSU3 229 aaPredicted RBP10.23□□□□□ -0.77
SLIRP-205ENST00000556310 TRIM2Q9C040 744 aa10.23□□□□□ -0.77
SLIRP-205ENST00000556310 NSRP1Q9H0G5 558 aaKnown RBP10.23□□□□□ -0.77
SLIRP-205ENST00000556310 GID8Q9NWU2 228 aa10.23□□□□□ -0.77
SLIRP-205ENST00000556310 RPS6KB2Q9UBS0 482 aa10.23□□□□□ -0.77
SLIRP-205ENST00000556310 GPR52Q9Y2T5 361 aa10.23□□□□□ -0.77
SLIRP-205ENST00000556310 LOC100653049A0A140TA62 436 aa10.22□□□□□ -0.77
SLIRP-205ENST00000556310 ELOA3DA6NLF2 546 aaPredicted RBP10.22□□□□□ -0.77
SLIRP-205ENST00000556310 ENO4A6NNW6 628 aa10.22□□□□□ -0.77
SLIRP-205ENST00000556310 DEFB108AA8MXU0 73 aa10.22□□□□□ -0.77
SLIRP-205ENST00000556310 FMO6PO60774 539 aa10.22□□□□□ -0.77
SLIRP-205ENST00000556310 RAMP1O60894 148 aa10.22□□□□□ -0.77
SLIRP-205ENST00000556310 KRT34O76011 436 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms