RNA–Protein interactions for RNA: ENST00000556082.5

ATXN3-235, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 660 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-235ENST00000556082 TNFRSF13CQ96RJ3 184 aa7.57□□□□□ -1.2
ATXN3-235ENST00000556082 LMF1Q96S06 567 aa7.57□□□□□ -1.2
ATXN3-235ENST00000556082 GPX7Q96SL4 187 aaPredicted RBP7.57□□□□□ -1.2
ATXN3-235ENST00000556082 ADOQ96SZ5 270 aa7.57□□□□□ -1.2
ATXN3-235ENST00000556082 ENKD1Q9H0I2 346 aa7.57□□□□□ -1.2
ATXN3-235ENST00000556082 WDR54Q9H977 334 aa7.57□□□□□ -1.2
ATXN3-235ENST00000556082 MCCC2Q9HCC0 563 aa7.57□□□□□ -1.2
ATXN3-235ENST00000556082 FBXO8Q9NRD0 319 aa7.57□□□□□ -1.2
ATXN3-235ENST00000556082 INPP5EQ9NRR6 644 aa7.57□□□□□ -1.2
ATXN3-235ENST00000556082 HAO2Q9NYQ3 351 aa7.57□□□□□ -1.2
ATXN3-235ENST00000556082 GPR52Q9Y2T5 361 aa7.57□□□□□ -1.2
ATXN3-235ENST00000556082 SPTBP11277 2137 aa7.57□□□□□ -1.2
ATXN3-235ENST00000556082 IGKV1D-42A0A075B6H8 117 aa7.56□□□□□ -1.2
ATXN3-235ENST00000556082 SAGE2PA6NJ88 616 aa7.56□□□□□ -1.2
ATXN3-235ENST00000556082 SLC22A31A6NKX4 558 aa7.56□□□□□ -1.2
ATXN3-235ENST00000556082 RIIAD1A6NNX1 92 aa7.56□□□□□ -1.2
ATXN3-235ENST00000556082 PATE3B3GLJ2 98 aa7.56□□□□□ -1.2
ATXN3-235ENST00000556082 B4E171 279 aa7.56□□□□□ -1.2
ATXN3-235ENST00000556082 IMPA2O14732 288 aa7.56□□□□□ -1.2
ATXN3-235ENST00000556082 MYL12BO14950 172 aa7.56□□□□□ -1.2
ATXN3-235ENST00000556082 ICOSLGO75144 302 aa7.56□□□□□ -1.2
ATXN3-235ENST00000556082 IFNGP01579 166 aa7.56□□□□□ -1.2
ATXN3-235ENST00000556082 GSTP1P09211 210 aaKnown RBP7.56□□□□□ -1.2
ATXN3-235ENST00000556082 TSPAN19P0C672 248 aa7.56□□□□□ -1.2
ATXN3-235ENST00000556082 LIMS3P0CW19 117 aa7.56□□□□□ -1.2
ATXN3-235ENST00000556082 LIMS4P0CW20 117 aa7.56□□□□□ -1.2
ATXN3-235ENST00000556082 CPEP16870 476 aa7.56□□□□□ -1.2
ATXN3-235ENST00000556082 FUT1P19526 365 aa7.56□□□□□ -1.2
ATXN3-235ENST00000556082 PSMA1P25786 263 aaKnown RBP7.56□□□□□ -1.2
ATXN3-235ENST00000556082 ABCD3P28288 659 aa7.56□□□□□ -1.2
ATXN3-235ENST00000556082 IL12BP29460 328 aa7.56□□□□□ -1.2
ATXN3-235ENST00000556082 ETV5P41161 510 aa7.56□□□□□ -1.2
ATXN3-235ENST00000556082 TSPAN7P41732 249 aa7.56□□□□□ -1.2
ATXN3-235ENST00000556082 GRK6P43250 576 aa7.56□□□□□ -1.2
ATXN3-235ENST00000556082 CAPZA2P47755 286 aa7.56□□□□□ -1.2
ATXN3-235ENST00000556082 ENTPD1P49961 510 aa7.56□□□□□ -1.2
ATXN3-235ENST00000556082 ETV1P50549 477 aa7.56□□□□□ -1.2
ATXN3-235ENST00000556082 BMXP51813 675 aa7.56□□□□□ -1.2
ATXN3-235ENST00000556082 DLX5P56178 289 aa7.56□□□□□ -1.2
ATXN3-235ENST00000556082 WNT4P56705 351 aa7.56□□□□□ -1.2
ATXN3-235ENST00000556082 PRPS1P60891 318 aa7.56□□□□□ -1.2
ATXN3-235ENST00000556082 RPS4XP62701 263 aaKnown RBP7.56□□□□□ -1.2
ATXN3-235ENST00000556082 CRYZQ08257 329 aaKnown RBP7.56□□□□□ -1.2
ATXN3-235ENST00000556082 PLCXD2Q0VAA5 305 aa7.56□□□□□ -1.2
ATXN3-235ENST00000556082 ITGADQ13349 1161 aa7.56□□□□□ -1.2
ATXN3-235ENST00000556082 GPR50Q13585 617 aa7.56□□□□□ -1.2
ATXN3-235ENST00000556082 TSTQ16762 297 aaKnown RBP7.56□□□□□ -1.2
ATXN3-235ENST00000556082 NIPAL3Q6P499 406 aa7.56□□□□□ -1.2
ATXN3-235ENST00000556082 ARHGAP11AQ6P4F7 1023 aa7.56□□□□□ -1.2
ATXN3-235ENST00000556082 LANCL3Q6ZV70 420 aa7.56□□□□□ -1.2
ATXN3-235ENST00000556082 APCDD1LQ8NCL9 501 aa7.56□□□□□ -1.2
ATXN3-235ENST00000556082 OR9Q1Q8NGQ5 310 aa7.56□□□□□ -1.2
ATXN3-235ENST00000556082 OR52N1Q8NH53 320 aa7.56□□□□□ -1.2
ATXN3-235ENST00000556082 OR51A7Q8NH64 312 aa7.56□□□□□ -1.2
ATXN3-235ENST00000556082 OR5W2Q8NH69 310 aa7.56□□□□□ -1.2
ATXN3-235ENST00000556082 NDNFQ8TB73 568 aa7.56□□□□□ -1.2
ATXN3-235ENST00000556082 PHOSPHO1Q8TCT1 267 aa7.56□□□□□ -1.2
ATXN3-235ENST00000556082 RNF138Q8WVD3 245 aa7.56□□□□□ -1.2
ATXN3-235ENST00000556082 S100ZQ8WXG8 99 aa7.56□□□□□ -1.2
ATXN3-235ENST00000556082 RPL3LQ92901 407 aaKnown RBP7.56□□□□□ -1.2
ATXN3-235ENST00000556082 PTP4A1Q93096 173 aa7.56□□□□□ -1.2
ATXN3-235ENST00000556082 BORCS5Q969J3 196 aa7.56□□□□□ -1.2
ATXN3-235ENST00000556082 OMA1Q96E52 524 aa7.56□□□□□ -1.2
ATXN3-235ENST00000556082 SH3YL1Q96HL8 342 aaPredicted RBP7.56□□□□□ -1.2
ATXN3-235ENST00000556082 FANCD2OSQ96PS1 177 aa7.56□□□□□ -1.2
ATXN3-235ENST00000556082 GAL3ST4Q96RP7 486 aa7.56□□□□□ -1.2
ATXN3-235ENST00000556082 COQ7Q99807 217 aa7.56□□□□□ -1.2
ATXN3-235ENST00000556082 CTRCQ99895 268 aa7.56□□□□□ -1.2
ATXN3-235ENST00000556082 WDR77Q9BQA1 342 aaPredicted RBP7.56□□□□□ -1.2
ATXN3-235ENST00000556082 ZNF649Q9BS31 505 aa7.56□□□□□ -1.2
ATXN3-235ENST00000556082 IFT27Q9BW83 186 aa7.56□□□□□ -1.2
ATXN3-235ENST00000556082 SLIRPQ9GZT3 109 aaKnown RBP7.56□□□□□ -1.2
ATXN3-235ENST00000556082 NXF2Q9GZY0 626 aaKnown RBP7.56□□□□□ -1.2
ATXN3-235ENST00000556082 DCSTAMPQ9H295 470 aa7.56□□□□□ -1.2
ATXN3-235ENST00000556082 MMP27Q9H306 513 aa7.56□□□□□ -1.2
ATXN3-235ENST00000556082 CCDC86Q9H6F5 360 aaKnown RBP7.56□□□□□ -1.2
ATXN3-235ENST00000556082 HINT3Q9NQE9 182 aaKnown RBP7.56□□□□□ -1.2
ATXN3-235ENST00000556082 NDUFB11Q9NX14 153 aa7.56□□□□□ -1.2
ATXN3-235ENST00000556082 TAS2R16Q9NYV7 291 aa7.56□□□□□ -1.2
ATXN3-235ENST00000556082 CCDC59Q9P031 241 aaKnown RBP7.56□□□□□ -1.2
ATXN3-235ENST00000556082 C19orf25Q9UFG5 118 aaPredicted RBP7.56□□□□□ -1.2
ATXN3-235ENST00000556082 CHRNA9Q9UGM1 479 aa7.56□□□□□ -1.2
ATXN3-235ENST00000556082 KLHL21Q9UJP4 597 aa7.56□□□□□ -1.2
ATXN3-235ENST00000556082 B3GNT3Q9Y2A9 372 aa7.56□□□□□ -1.2
ATXN3-235ENST00000556082 ZNF337Q9Y3M9 751 aa7.56□□□□□ -1.2
ATXN3-235ENST00000556082 TRIOO75962 3097 aa7.56□□□□□ -1.2
ATXN3-235ENST00000556082 ASXL3Q9C0F0 2248 aa7.56□□□□□ -1.2
ATXN3-235ENST00000556082 PRUNE2Q8WUY3 3088 aa7.55□□□□□ -1.2
ATXN3-235ENST00000556082 UNC13CQ8NB66 2214 aa7.55□□□□□ -1.2
ATXN3-235ENST00000556082 TECTAO75443 2155 aa7.55□□□□□ -1.2
ATXN3-235ENST00000556082 LOC102723996A0A087X1L8 192 aa7.55□□□□□ -1.2
ATXN3-235ENST00000556082 PRR23D1E9PI22 279 aaPredicted RBP7.55□□□□□ -1.2
ATXN3-235ENST00000556082 KPNA4O00629 521 aaPredicted RBP7.55□□□□□ -1.2
ATXN3-235ENST00000556082 CDC40O60508 579 aaKnown RBP eCLIP7.55□□□□□ -1.2
ATXN3-235ENST00000556082 ZFAND5O76080 213 aa7.55□□□□□ -1.2
ATXN3-235ENST00000556082 SLC2A10O95528 541 aa7.55□□□□□ -1.2
ATXN3-235ENST00000556082 NADKO95544 446 aaPredicted RBP7.55□□□□□ -1.2
ATXN3-235ENST00000556082 LDOC1O95751 146 aaPredicted RBP7.55□□□□□ -1.2
ATXN3-235ENST00000556082 CH25HO95992 272 aa7.55□□□□□ -1.2
ATXN3-235ENST00000556082 CD63P08962 238 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms