RNA–Protein interactions for RNA: ENST00000555067.1

VRK1-203, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-203ENST00000555067 FRMPD3Q5JV73 1810 aa4.28□□□□□ -1.72
VRK1-203ENST00000555067 SH3TC1Q8TE82 1336 aa4.27□□□□□ -1.73
VRK1-203ENST00000555067 SMCO2A6NFE2 343 aa4.27□□□□□ -1.73
VRK1-203ENST00000555067 CCT8L1PA6NM43 557 aa4.27□□□□□ -1.73
VRK1-203ENST00000555067 FCN1O00602 326 aa4.27□□□□□ -1.73
VRK1-203ENST00000555067 PFKFB2O60825 505 aa4.27□□□□□ -1.73
VRK1-203ENST00000555067 CDC123O75794 336 aaPredicted RBP4.27□□□□□ -1.73
VRK1-203ENST00000555067 SCELO95171 688 aa4.27□□□□□ -1.73
VRK1-203ENST00000555067 HPP00738 406 aa4.27□□□□□ -1.73
VRK1-203ENST00000555067 ANXA5P08758 320 aa4.27□□□□□ -1.73
VRK1-203ENST00000555067 UBCP0CG48 685 aaKnown RBP4.27□□□□□ -1.73
VRK1-203ENST00000555067 HPGDP15428 266 aa4.27□□□□□ -1.73
VRK1-203ENST00000555067 HTR2BP41595 481 aa4.27□□□□□ -1.73
VRK1-203ENST00000555067 MAGEA9P43362 315 aa4.27□□□□□ -1.73
VRK1-203ENST00000555067 GNPDA1P46926 289 aa4.27□□□□□ -1.73
VRK1-203ENST00000555067 RFX3P48380 749 aa4.27□□□□□ -1.73
VRK1-203ENST00000555067 MAP3K7CLP57077 242 aa4.27□□□□□ -1.73
VRK1-203ENST00000555067 RPL8P62917 257 aaKnown RBP4.27□□□□□ -1.73
VRK1-203ENST00000555067 CDH17Q12864 832 aa4.27□□□□□ -1.73
VRK1-203ENST00000555067 COTL1Q14019 142 aa4.27□□□□□ -1.73
VRK1-203ENST00000555067 MTF1Q14872 753 aa4.27□□□□□ -1.73
VRK1-203ENST00000555067 NDUFA9Q16795 377 aa4.27□□□□□ -1.73
VRK1-203ENST00000555067 FAM120AOSQ5T036 256 aa4.27□□□□□ -1.73
VRK1-203ENST00000555067 LGSNQ5TDP6 509 aa4.27□□□□□ -1.73
VRK1-203ENST00000555067 GPR157Q5UAW9 335 aa4.27□□□□□ -1.73
VRK1-203ENST00000555067 CHMP1BQ7LBR1 199 aa4.27□□□□□ -1.73
VRK1-203ENST00000555067 OR2L13Q8N349 312 aa4.27□□□□□ -1.73
VRK1-203ENST00000555067 C15orf54Q8N8G6 183 aa4.27□□□□□ -1.73
VRK1-203ENST00000555067 ATP6V0D2Q8N8Y2 350 aa4.27□□□□□ -1.73
VRK1-203ENST00000555067 OR52H1Q8NGJ2 320 aa4.27□□□□□ -1.73
VRK1-203ENST00000555067 OR52I1Q8NGK6 324 aa4.27□□□□□ -1.73
VRK1-203ENST00000555067 OR4A4PQ8NGN8 299 aa4.27□□□□□ -1.73
VRK1-203ENST00000555067 PLPPR1Q8TBJ4 325 aa4.27□□□□□ -1.73
VRK1-203ENST00000555067 FAF2Q96CS3 445 aa4.27□□□□□ -1.73
VRK1-203ENST00000555067 CXorf40BQ96DE9 158 aa4.27□□□□□ -1.73
VRK1-203ENST00000555067 TNFRSF13CQ96RJ3 184 aa4.27□□□□□ -1.73
VRK1-203ENST00000555067 CLCC1Q96S66 551 aa4.27□□□□□ -1.73
VRK1-203ENST00000555067 FAM173AQ9BQD7 235 aa4.27□□□□□ -1.73
VRK1-203ENST00000555067 TMEM175Q9BSA9 504 aa4.27□□□□□ -1.73
VRK1-203ENST00000555067 RACGAP1Q9H0H5 632 aa4.27□□□□□ -1.73
VRK1-203ENST00000555067 MEPEQ9NQ76 525 aaPredicted RBP4.27□□□□□ -1.73
VRK1-203ENST00000555067 CUTCQ9NTM9 273 aa4.27□□□□□ -1.73
VRK1-203ENST00000555067 BFARQ9NZS9 450 aa4.27□□□□□ -1.73
VRK1-203ENST00000555067 CHMP5Q9NZZ3 219 aa4.27□□□□□ -1.73
VRK1-203ENST00000555067 STOX2Q9P2F5 926 aaPredicted RBP4.27□□□□□ -1.73
VRK1-203ENST00000555067 CTSFQ9UBX1 484 aa4.27□□□□□ -1.73
VRK1-203ENST00000555067 SEC14L4Q9UDX3 406 aa4.27□□□□□ -1.73
VRK1-203ENST00000555067 NUP50Q9UKX7 468 aa4.27□□□□□ -1.73
VRK1-203ENST00000555067 RNF24Q9Y225 148 aa4.27□□□□□ -1.73
VRK1-203ENST00000555067 PCNX3Q9H6A9 2034 aa4.27□□□□□ -1.73
VRK1-203ENST00000555067 IGHV2-70DA0A0C4DH43 119 aa4.26□□□□□ -1.73
VRK1-203ENST00000555067 TRBV5-4A0A0C4DH59 114 aa4.26□□□□□ -1.73
VRK1-203ENST00000555067 ZNF99A8MXY4 864 aaPredicted RBP4.26□□□□□ -1.73
VRK1-203ENST00000555067 C11orf98E9PRG8 122 aa4.26□□□□□ -1.73
VRK1-203ENST00000555067 FBP2O00757 339 aa4.26□□□□□ -1.73
VRK1-203ENST00000555067 PSTPIP1O43586 416 aa4.26□□□□□ -1.73
VRK1-203ENST00000555067 TSPAN13O95857 204 aa4.26□□□□□ -1.73
VRK1-203ENST00000555067 CALML3P27482 149 aa4.26□□□□□ -1.73
VRK1-203ENST00000555067 DCKP27707 260 aa4.26□□□□□ -1.73
VRK1-203ENST00000555067 PRDX3P30048 256 aaKnown RBP4.26□□□□□ -1.73
VRK1-203ENST00000555067 RRM2P31350 389 aa4.26□□□□□ -1.73
VRK1-203ENST00000555067 MMP12P39900 470 aa4.26□□□□□ -1.73
VRK1-203ENST00000555067 MAP3K8P41279 467 aa4.26□□□□□ -1.73
VRK1-203ENST00000555067 HMGCS2P54868 508 aa4.26□□□□□ -1.73
VRK1-203ENST00000555067 RAB10P61026 200 aa4.26□□□□□ -1.73
VRK1-203ENST00000555067 ST3GAL3Q11203 375 aa4.26□□□□□ -1.73
VRK1-203ENST00000555067 SELENBP1Q13228 472 aa4.26□□□□□ -1.73
VRK1-203ENST00000555067 FAM189A2Q15884 450 aa4.26□□□□□ -1.73
VRK1-203ENST00000555067 AANATQ16613 207 aa4.26□□□□□ -1.73
VRK1-203ENST00000555067 C22orf42Q6IC83 251 aa4.26□□□□□ -1.73
VRK1-203ENST00000555067 OR8G2PQ6IF36 304 aa4.26□□□□□ -1.73
VRK1-203ENST00000555067 APOOLQ6UXV4 268 aa4.26□□□□□ -1.73
VRK1-203ENST00000555067 MRPL21Q7Z2W9 205 aaKnown RBP4.26□□□□□ -1.73
VRK1-203ENST00000555067 CCDC71Q8IV32 467 aaPredicted RBP4.26□□□□□ -1.73
VRK1-203ENST00000555067 CCDC65Q8IXS2 484 aa4.26□□□□□ -1.73
VRK1-203ENST00000555067 TMEM178AQ8NBL3 297 aa4.26□□□□□ -1.73
VRK1-203ENST00000555067 ZNRF1Q8ND25 227 aa4.26□□□□□ -1.73
VRK1-203ENST00000555067 TMEM104Q8NE00 496 aa4.26□□□□□ -1.73
VRK1-203ENST00000555067 OR2T33Q8NG76 320 aa4.26□□□□□ -1.73
VRK1-203ENST00000555067 SETD7Q8WTS6 366 aaKnown RBP4.26□□□□□ -1.73
VRK1-203ENST00000555067 PDCD6IPQ8WUM4 868 aaKnown RBP4.26□□□□□ -1.73
VRK1-203ENST00000555067 TOMM40LQ969M1 308 aa4.26□□□□□ -1.73
VRK1-203ENST00000555067 ARL5BQ96KC2 179 aa4.26□□□□□ -1.73
VRK1-203ENST00000555067 ZNF641Q96N77 438 aaPredicted RBP4.26□□□□□ -1.73
VRK1-203ENST00000555067 CATSPER2Q96P56 530 aa4.26□□□□□ -1.73
VRK1-203ENST00000555067 OR5B2Q96R09 309 aa4.26□□□□□ -1.73
VRK1-203ENST00000555067 ZNF300Q96RE9 604 aaPredicted RBP4.26□□□□□ -1.73
VRK1-203ENST00000555067 KCNA7Q96RP8 456 aa4.26□□□□□ -1.73
VRK1-203ENST00000555067 TMEM246Q9BRR3 403 aa4.26□□□□□ -1.73
VRK1-203ENST00000555067 PITPNM3Q9BZ71 974 aa4.26□□□□□ -1.73
VRK1-203ENST00000555067 RAB34Q9BZG1 259 aa4.26□□□□□ -1.73
VRK1-203ENST00000555067 HOXD1Q9GZZ0 328 aa4.26□□□□□ -1.73
VRK1-203ENST00000555067 NEUROG2Q9H2A3 272 aa4.26□□□□□ -1.73
VRK1-203ENST00000555067 RNF41Q9H4P4 317 aaPredicted RBP4.26□□□□□ -1.73
VRK1-203ENST00000555067 NIPAL2Q9H841 368 aa4.26□□□□□ -1.73
VRK1-203ENST00000555067 PARVGQ9HBI0 331 aa4.26□□□□□ -1.73
VRK1-203ENST00000555067 IL26Q9NPH9 171 aa4.26□□□□□ -1.73
VRK1-203ENST00000555067 DYRK4Q9NR20 520 aa4.26□□□□□ -1.73
VRK1-203ENST00000555067 NUDT15Q9NV35 164 aa4.26□□□□□ -1.73
VRK1-203ENST00000555067 AKNAQ7Z591 1439 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms