RNA–Protein interactions for RNA: ENST00000554971.6

SHOX-204, Transcript of short stature homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHOX, Length 1,902 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-204ENST00000554971 CDH10Q9Y6N8 788 aa15.88■□□□□ 0.13
SHOX-204ENST00000554971 SURF4O15260 269 aa15.88■□□□□ 0.13
SHOX-204ENST00000554971 FCMRO60667 390 aa15.88■□□□□ 0.13
SHOX-204ENST00000554971 CLPSP04118 112 aa15.88■□□□□ 0.13
SHOX-204ENST00000554971 IGKV3-11P04433 115 aa15.88■□□□□ 0.13
SHOX-204ENST00000554971 S1PR1P21453 382 aa15.88■□□□□ 0.13
SHOX-204ENST00000554971 RPS4Y1P22090 263 aaKnown RBP15.88■□□□□ 0.13
SHOX-204ENST00000554971 GABRA5P31644 462 aa15.88■□□□□ 0.13
SHOX-204ENST00000554971 SLC9A3P48764 834 aa15.88■□□□□ 0.13
SHOX-204ENST00000554971 EIF2B2P49770 351 aaKnown RBP15.88■□□□□ 0.13
SHOX-204ENST00000554971 BIKQ13323 160 aa15.88■□□□□ 0.13
SHOX-204ENST00000554971 DOC2BQ14184 412 aa15.88■□□□□ 0.13
SHOX-204ENST00000554971 TBR1Q16650 682 aa15.88■□□□□ 0.13
SHOX-204ENST00000554971 BTBD16Q32M84 506 aa15.88■□□□□ 0.13
SHOX-204ENST00000554971 LIPKQ5VXJ0 399 aa15.88■□□□□ 0.13
SHOX-204ENST00000554971 NXNL2Q5VZ03 156 aa15.88■□□□□ 0.13
SHOX-204ENST00000554971 RPL13AP3Q6NVV1 102 aa15.88■□□□□ 0.13
SHOX-204ENST00000554971 CD200R1LQ6Q8B3 271 aa15.88■□□□□ 0.13
SHOX-204ENST00000554971 BCDIN3DQ7Z5W3 292 aaKnown RBP15.88■□□□□ 0.13
SHOX-204ENST00000554971 CDRT4Q8N9R6 151 aa15.88■□□□□ 0.13
SHOX-204ENST00000554971 OR8D4Q8NGM9 314 aa15.88■□□□□ 0.13
SHOX-204ENST00000554971 SLC2A12Q8TD20 617 aa15.88■□□□□ 0.13
SHOX-204ENST00000554971 PSMF1Q92530 271 aa15.88■□□□□ 0.13
SHOX-204ENST00000554971 SLC9A6Q92581 669 aa15.88■□□□□ 0.13
SHOX-204ENST00000554971 RIT1Q92963 219 aa15.88■□□□□ 0.13
SHOX-204ENST00000554971 CTHRC1Q96CG8 243 aa15.88■□□□□ 0.13
SHOX-204ENST00000554971 FER1L6-AS2Q96M78 137 aa15.88■□□□□ 0.13
SHOX-204ENST00000554971 SDF2Q99470 211 aa15.88■□□□□ 0.13
SHOX-204ENST00000554971 KCNS3Q9BQ31 491 aa15.88■□□□□ 0.13
SHOX-204ENST00000554971 ARHGAP9Q9BRR9 750 aa15.88■□□□□ 0.13
SHOX-204ENST00000554971 ZNF350Q9GZX5 532 aa15.88■□□□□ 0.13
SHOX-204ENST00000554971 NPAP1Q9NZP6 1156 aa15.88■□□□□ 0.13
SHOX-204ENST00000554971 CLCA3PQ9Y6N3 262 aa15.88■□□□□ 0.13
SHOX-204ENST00000554971 OR10H2O60403 315 aa15.87■□□□□ 0.13
SHOX-204ENST00000554971 STX11O75558 287 aa15.87■□□□□ 0.13
SHOX-204ENST00000554971 TRHRP34981 398 aaPredicted RBP15.87■□□□□ 0.13
SHOX-204ENST00000554971 PGDP52209 483 aa15.87■□□□□ 0.13
SHOX-204ENST00000554971 EEF1A1P68104 462 aaKnown RBP15.87■□□□□ 0.13
SHOX-204ENST00000554971 PSPHP78330 225 aa15.87■□□□□ 0.13
SHOX-204ENST00000554971 ZNF628Q5EBL2 1059 aa15.87■□□□□ 0.13
SHOX-204ENST00000554971 ARMC4Q5T2S8 1044 aa15.87■□□□□ 0.13
SHOX-204ENST00000554971 FHL5Q5TD97 284 aa15.87■□□□□ 0.13
SHOX-204ENST00000554971 FAM111BQ6SJ93 734 aa15.87■□□□□ 0.13
SHOX-204ENST00000554971 ZNF620Q6ZNG0 422 aa15.87■□□□□ 0.13
SHOX-204ENST00000554971 CLEC1AQ8NC01 280 aa15.87■□□□□ 0.13
SHOX-204ENST00000554971 PSD4Q8NDX1 1056 aa15.87■□□□□ 0.13
SHOX-204ENST00000554971 FAM83FQ8NEG4 500 aaPredicted RBP15.87■□□□□ 0.13
SHOX-204ENST00000554971 OR2T33Q8NG76 320 aa15.87■□□□□ 0.13
SHOX-204ENST00000554971 OR14A16Q8NHC5 309 aa15.87■□□□□ 0.13
SHOX-204ENST00000554971 BRIX1Q8TDN6 353 aaKnown RBP15.87■□□□□ 0.13
SHOX-204ENST00000554971 ELP5Q8TE02 316 aa15.87■□□□□ 0.13
SHOX-204ENST00000554971 ZNF721Q8TF20 911 aa15.87■□□□□ 0.13
SHOX-204ENST00000554971 CDS1Q92903 461 aa15.87■□□□□ 0.13
SHOX-204ENST00000554971 SENP5Q96HI0 755 aaPredicted RBP15.87■□□□□ 0.13
SHOX-204ENST00000554971 FAM46AQ96IP4 442 aaKnown RBP15.87■□□□□ 0.13
SHOX-204ENST00000554971 BARHL1Q9BZE3 327 aa15.87■□□□□ 0.13
SHOX-204ENST00000554971 FN3KQ9H479 309 aa15.87■□□□□ 0.13
SHOX-204ENST00000554971 ANKRA2Q9H9E1 313 aa15.87■□□□□ 0.13
SHOX-204ENST00000554971 POLE4Q9NR33 117 aa15.87■□□□□ 0.13
SHOX-204ENST00000554971 MAT2BQ9NZL9 334 aa15.87■□□□□ 0.13
SHOX-204ENST00000554971 CMAHPQ9Y471 501 aa15.87■□□□□ 0.13
SHOX-204ENST00000554971 SPIN1Q9Y657 262 aaPredicted RBP15.87■□□□□ 0.13
SHOX-204ENST00000554971 TRDV1A0A1B0GX56 115 aa15.86■□□□□ 0.13
SHOX-204ENST00000554971 TRAPPC13A5PLN9 417 aa15.86■□□□□ 0.13
SHOX-204ENST00000554971 SYNDIG1LA6NDD5 238 aa15.86■□□□□ 0.13
SHOX-204ENST00000554971 SNPHO15079 494 aa15.86■□□□□ 0.13
SHOX-204ENST00000554971 PRKNO60260 465 aaPredicted RBP15.86■□□□□ 0.13
SHOX-204ENST00000554971 ZIC2O95409 532 aaPredicted RBP15.86■□□□□ 0.13
SHOX-204ENST00000554971 GTF2E2P29084 291 aaKnown RBP15.86■□□□□ 0.13
SHOX-204ENST00000554971 HTR1FP30939 366 aa15.86■□□□□ 0.13
SHOX-204ENST00000554971 GALNSP34059 522 aa15.86■□□□□ 0.13
SHOX-204ENST00000554971 CDH11P55287 796 aa15.86■□□□□ 0.13
SHOX-204ENST00000554971 AIMP2Q13155 320 aaKnown RBP15.86■□□□□ 0.13
SHOX-204ENST00000554971 PGGHGQ32M88 737 aa15.86■□□□□ 0.13
SHOX-204ENST00000554971 GALNT12Q8IXK2 581 aa15.86■□□□□ 0.13
SHOX-204ENST00000554971 ZNF619Q8N2I2 560 aa15.86■□□□□ 0.13
SHOX-204ENST00000554971 GALNT16Q8N428 558 aa15.86■□□□□ 0.13
SHOX-204ENST00000554971 OR52N1Q8NH53 320 aa15.86■□□□□ 0.13
SHOX-204ENST00000554971 DAZLQ92904 295 aaKnown RBP15.86■□□□□ 0.13
SHOX-204ENST00000554971 SDHCQ99643 169 aaPredicted RBP15.86■□□□□ 0.13
SHOX-204ENST00000554971 SEMA4CQ9C0C4 833 aa15.86■□□□□ 0.13
SHOX-204ENST00000554971 OR8D2Q9GZM6 311 aa15.86■□□□□ 0.13
SHOX-204ENST00000554971 ATP13A2Q9NQ11 1180 aa15.86■□□□□ 0.13
SHOX-204ENST00000554971 SNTG1Q9NSN8 517 aa15.86■□□□□ 0.13
SHOX-204ENST00000554971 H2AFY2Q9P0M6 372 aaPredicted RBP15.86■□□□□ 0.13
SHOX-204ENST00000554971 SF3B6Q9Y3B4 125 aaKnown RBP15.86■□□□□ 0.13
SHOX-204ENST00000554971 GRIP1Q9Y3R0 1128 aa15.86■□□□□ 0.13
SHOX-204ENST00000554971 TMED10P49755 219 aaKnown RBP15.86■□□□□ 0.13
SHOX-204ENST00000554971 RRADP55042 308 aa15.86■□□□□ 0.13
SHOX-204ENST00000554971 SOX8P57073 446 aa15.86■□□□□ 0.13
SHOX-204ENST00000554971 LSM11P83369 360 aaKnown RBP eCLIP15.86■□□□□ 0.13
SHOX-204ENST00000554971 BDH1Q02338 343 aa15.86■□□□□ 0.13
SHOX-204ENST00000554971 GPR50Q13585 617 aa15.86■□□□□ 0.13
SHOX-204ENST00000554971 TRMT12Q53H54 448 aaKnown RBP15.86■□□□□ 0.13
SHOX-204ENST00000554971 PAQR6Q6TCH4 344 aa15.86■□□□□ 0.13
SHOX-204ENST00000554971 GID4Q8IVV7 300 aa15.86■□□□□ 0.13
SHOX-204ENST00000554971 NKAIN4Q8IVV8 208 aa15.86■□□□□ 0.13
SHOX-204ENST00000554971 ZNF485Q8NCK3 441 aa15.86■□□□□ 0.13
SHOX-204ENST00000554971 OR1N1Q8NGS0 311 aa15.86■□□□□ 0.13
SHOX-204ENST00000554971 HPS1Q92902 700 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms