RNA–Protein interactions for RNA: ENST00000554803.5

SRP54-205, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-205ENST00000554803 SLC22A31A6NKX4 558 aa10.21□□□□□ -0.77
SRP54-205ENST00000554803 A8MU76 341 aa10.21□□□□□ -0.77
SRP54-205ENST00000554803 BTN3A3O00478 584 aa10.21□□□□□ -0.77
SRP54-205ENST00000554803 SURF4O15260 269 aa10.21□□□□□ -0.77
SRP54-205ENST00000554803 TMPRSS11DO60235 418 aa10.21□□□□□ -0.77
SRP54-205ENST00000554803 B4GALT2O60909 372 aa10.21□□□□□ -0.77
SRP54-205ENST00000554803 STX11O75558 287 aa10.21□□□□□ -0.77
SRP54-205ENST00000554803 TPPPO94811 219 aa10.21□□□□□ -0.77
SRP54-205ENST00000554803 RCBTB2O95199 551 aa10.21□□□□□ -0.77
SRP54-205ENST00000554803 DHFRP00374 187 aa10.21□□□□□ -0.77
SRP54-205ENST00000554803 SERPINA3P01011 423 aa10.21□□□□□ -0.77
SRP54-205ENST00000554803 CD1AP06126 327 aa10.21□□□□□ -0.77
SRP54-205ENST00000554803 ZNF10P21506 573 aaPredicted RBP10.21□□□□□ -0.77
SRP54-205ENST00000554803 BUD31P41223 144 aaPredicted RBP10.21□□□□□ -0.77
SRP54-205ENST00000554803 OMPP47874 163 aa10.21□□□□□ -0.77
SRP54-205ENST00000554803 RFX3P48380 749 aa10.21□□□□□ -0.77
SRP54-205ENST00000554803 CASP9P55211 416 aa10.21□□□□□ -0.77
SRP54-205ENST00000554803 RRAS2P62070 204 aaPredicted RBP10.21□□□□□ -0.77
SRP54-205ENST00000554803 RPS25P62851 125 aaKnown RBP10.21□□□□□ -0.77
SRP54-205ENST00000554803 RPS26P62854 115 aaKnown RBP10.21□□□□□ -0.77
SRP54-205ENST00000554803 ACTC1P68032 377 aa10.21□□□□□ -0.77
SRP54-205ENST00000554803 ACTA1P68133 377 aa10.21□□□□□ -0.77
SRP54-205ENST00000554803 PITPNAQ00169 270 aa10.21□□□□□ -0.77
SRP54-205ENST00000554803 FAM214AQ32MH5 1076 aa10.21□□□□□ -0.77
SRP54-205ENST00000554803 CYP27C1Q4G0S4 372 aa10.21□□□□□ -0.77
SRP54-205ENST00000554803 SNAP47Q5SQN1 464 aa10.21□□□□□ -0.77
SRP54-205ENST00000554803 SLC6A19Q695T7 634 aa10.21□□□□□ -0.77
SRP54-205ENST00000554803 HEPHL1Q6MZM0 1159 aa10.21□□□□□ -0.77
SRP54-205ENST00000554803 ZCCHC12Q6PEW1 402 aa10.21□□□□□ -0.77
SRP54-205ENST00000554803 CNIH2Q6PI25 160 aa10.21□□□□□ -0.77
SRP54-205ENST00000554803 C6orf15Q6UXA7 325 aaPredicted RBP10.21□□□□□ -0.77
SRP54-205ENST00000554803 SPNS3Q6ZMD2 512 aa10.21□□□□□ -0.77
SRP54-205ENST00000554803 ZNF620Q6ZNG0 422 aa10.21□□□□□ -0.77
SRP54-205ENST00000554803 SPATC1Q76KD6 591 aa10.21□□□□□ -0.77
SRP54-205ENST00000554803 RANBP3LQ86VV4 465 aaPredicted RBP10.21□□□□□ -0.77
SRP54-205ENST00000554803 PLXDC1Q8IUK5 500 aa10.21□□□□□ -0.77
SRP54-205ENST00000554803 SLC7A5P1Q8MH63 180 aa10.21□□□□□ -0.77
SRP54-205ENST00000554803 MS4A15Q8N5U1 240 aa10.21□□□□□ -0.77
SRP54-205ENST00000554803 ACBD7Q8N6N7 88 aa10.21□□□□□ -0.77
SRP54-205ENST00000554803 OR7G1Q8NGA0 311 aa10.21□□□□□ -0.77
SRP54-205ENST00000554803 OR52L1Q8NGH7 329 aa10.21□□□□□ -0.77
SRP54-205ENST00000554803 OR4D11Q8NGI4 311 aa10.21□□□□□ -0.77
SRP54-205ENST00000554803 OR52P1PQ8NH57 321 aa10.21□□□□□ -0.77
SRP54-205ENST00000554803 AKAP1Q92667 903 aaKnown RBP eCLIP10.21□□□□□ -0.77
SRP54-205ENST00000554803 PNPLA2Q96AD5 504 aa10.21□□□□□ -0.77
SRP54-205ENST00000554803 SNRNP40Q96DI7 357 aaKnown RBP10.21□□□□□ -0.77
SRP54-205ENST00000554803 TRMT61AQ96FX7 289 aaKnown RBP10.21□□□□□ -0.77
SRP54-205ENST00000554803 MS4A4EQ96PG1 132 aa10.21□□□□□ -0.77
SRP54-205ENST00000554803 NEDD4LQ96PU5 975 aa10.21□□□□□ -0.77
SRP54-205ENST00000554803 ATF6BQ99941 703 aa10.21□□□□□ -0.77
SRP54-205ENST00000554803 MRI1Q9BV20 369 aa10.21□□□□□ -0.77
SRP54-205ENST00000554803 ACAT2Q9BWD1 397 aa10.21□□□□□ -0.77
SRP54-205ENST00000554803 PIGUQ9H490 435 aa10.21□□□□□ -0.77
SRP54-205ENST00000554803 UCK1Q9HA47 277 aa10.21□□□□□ -0.77
SRP54-205ENST00000554803 TEX10Q9NXF1 929 aaPredicted RBP10.21□□□□□ -0.77
SRP54-205ENST00000554803 PTGFRNQ9P2B2 879 aa10.21□□□□□ -0.77
SRP54-205ENST00000554803 TNFRSF10DQ9UBN6 386 aa10.21□□□□□ -0.77
SRP54-205ENST00000554803 RBMX2Q9Y388 322 aaKnown RBP10.21□□□□□ -0.77
SRP54-205ENST00000554803 NOX1Q9Y5S8 564 aa10.21□□□□□ -0.77
SRP54-205ENST00000554803 NPFFR2Q9Y5X5 522 aa10.21□□□□□ -0.77
SRP54-205ENST00000554803 CNTRLQ7Z7A1 2325 aa10.21□□□□□ -0.78
SRP54-205ENST00000554803 OR6C74A6NCV1 312 aa10.2□□□□□ -0.78
SRP54-205ENST00000554803 ANKUB1A6NFN9 424 aa10.2□□□□□ -0.78
SRP54-205ENST00000554803 FAM227AF5H4B4 570 aa10.2□□□□□ -0.78
SRP54-205ENST00000554803 M0R3H8 397 aa10.2□□□□□ -0.78
SRP54-205ENST00000554803 GABRPO00591 440 aa10.2□□□□□ -0.78
SRP54-205ENST00000554803 TOX3O15405 576 aaPredicted RBP10.2□□□□□ -0.78
SRP54-205ENST00000554803 PLA2G10O15496 165 aa10.2□□□□□ -0.78
SRP54-205ENST00000554803 PRICKLE3O43900 615 aaPredicted RBP10.2□□□□□ -0.78
SRP54-205ENST00000554803 HMGN2P05204 90 aaKnown RBP10.2□□□□□ -0.78
SRP54-205ENST00000554803 CHRM4P08173 479 aa10.2□□□□□ -0.78
SRP54-205ENST00000554803 CHRM5P08912 532 aaPredicted RBP10.2□□□□□ -0.78
SRP54-205ENST00000554803 FAM157BP0CG42 384 aa10.2□□□□□ -0.78
SRP54-205ENST00000554803 ZNF28P17035 718 aa10.2□□□□□ -0.78
SRP54-205ENST00000554803 POLR2CP19387 275 aaPredicted RBP10.2□□□□□ -0.78
SRP54-205ENST00000554803 C4BPBP20851 252 aa10.2□□□□□ -0.78
SRP54-205ENST00000554803 MAGP20916 626 aa10.2□□□□□ -0.78
SRP54-205ENST00000554803 ITGA3P26006 1051 aa10.2□□□□□ -0.78
SRP54-205ENST00000554803 CMPK1P30085 196 aa10.2□□□□□ -0.78
SRP54-205ENST00000554803 FEN1P39748 380 aaKnown RBP10.2□□□□□ -0.78
SRP54-205ENST00000554803 KIR2DL3P43628 341 aa10.2□□□□□ -0.78
SRP54-205ENST00000554803 PPM1FP49593 454 aaPredicted RBP10.2□□□□□ -0.78
SRP54-205ENST00000554803 RGS8P57771 180 aaPredicted RBP10.2□□□□□ -0.78
SRP54-205ENST00000554803 PPP1CAP62136 330 aa10.2□□□□□ -0.78
SRP54-205ENST00000554803 FABP5Q01469 135 aa10.2□□□□□ -0.78
SRP54-205ENST00000554803 TATDN3Q17R31 274 aa10.2□□□□□ -0.78
SRP54-205ENST00000554803 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.2□□□□□ -0.782e-6■■□□□ 13.9
SRP54-205ENST00000554803 TYW3Q6IPR3 259 aaKnown RBP10.2□□□□□ -0.78
SRP54-205ENST00000554803 PYHIN1Q6K0P9 492 aa10.2□□□□□ -0.78
SRP54-205ENST00000554803 ABHD17CQ6PCB6 329 aa10.2□□□□□ -0.78
SRP54-205ENST00000554803 ZNF322Q6U7Q0 402 aaPredicted RBP10.2□□□□□ -0.78
SRP54-205ENST00000554803 PLEKHM3Q6ZWE6 761 aa10.2□□□□□ -0.78
SRP54-205ENST00000554803 C16orf62Q7Z3J2 963 aa10.2□□□□□ -0.78
SRP54-205ENST00000554803 GDF7Q7Z4P5 450 aa10.2□□□□□ -0.78
SRP54-205ENST00000554803 NANOGNBQ7Z5D8 188 aa10.2□□□□□ -0.78
SRP54-205ENST00000554803 UBE3DQ7Z6J8 389 aa10.2□□□□□ -0.78
SRP54-205ENST00000554803 AMIGO1Q86WK6 493 aa10.2□□□□□ -0.78
SRP54-205ENST00000554803 GHDCQ8N2G8 530 aa10.2□□□□□ -0.78
SRP54-205ENST00000554803 MFSD9Q8NBP5 474 aa10.2□□□□□ -0.78
SRP54-205ENST00000554803 ATP6V1C2Q8NEY4 427 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms