RNA–Protein interactions for RNA: ENST00000554290.1

CPSF2-203, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-203ENST00000554290 M0R1B8 84 aa16.49■□□□□ 0.23
CPSF2-203ENST00000554290 TLX2O43763 284 aaPredicted RBP16.49■□□□□ 0.23
CPSF2-203ENST00000554290 SSX4O60224 188 aa16.49■□□□□ 0.23
CPSF2-203ENST00000554290 IL6P05231 212 aa16.49■□□□□ 0.23
CPSF2-203ENST00000554290 GPIP06744 558 aa16.49■□□□□ 0.23
CPSF2-203ENST00000554290 IMPDH2P12268 514 aa16.49■□□□□ 0.23
CPSF2-203ENST00000554290 PTNP21246 168 aa16.49■□□□□ 0.23
CPSF2-203ENST00000554290 CXCR1P25024 350 aa16.49■□□□□ 0.23
CPSF2-203ENST00000554290 EPHA3P29320 983 aa16.49■□□□□ 0.23
CPSF2-203ENST00000554290 NUDT6P53370 316 aa16.49■□□□□ 0.23
CPSF2-203ENST00000554290 EPS8Q12929 822 aa16.49■□□□□ 0.23
CPSF2-203ENST00000554290 SLC17A1Q14916 467 aa16.49■□□□□ 0.23
CPSF2-203ENST00000554290 COX20Q5RI15 118 aa16.49■□□□□ 0.23
CPSF2-203ENST00000554290 MRPL2Q5T653 305 aaKnown RBP16.49■□□□□ 0.23
CPSF2-203ENST00000554290 PAQR6Q6TCH4 344 aa16.49■□□□□ 0.23
CPSF2-203ENST00000554290 C17orf78Q8N4C9 275 aa16.49■□□□□ 0.23
CPSF2-203ENST00000554290 C1orf162Q8NEQ5 155 aaPredicted RBP16.49■□□□□ 0.23
CPSF2-203ENST00000554290 OR52E4Q8NGH9 312 aa16.49■□□□□ 0.23
CPSF2-203ENST00000554290 MDFIQ99750 246 aa16.49■□□□□ 0.23
CPSF2-203ENST00000554290 ADAM19Q9H013 955 aa16.49■□□□□ 0.23
CPSF2-203ENST00000554290 CALML5Q9NZT1 146 aa16.49■□□□□ 0.23
CPSF2-203ENST00000554290 ADAM21Q9UKJ8 722 aa16.49■□□□□ 0.23
CPSF2-203ENST00000554290 SLC22A3O75751 556 aa16.48■□□□□ 0.23
CPSF2-203ENST00000554290 ITGA5P08648 1049 aa16.48■□□□□ 0.23
CPSF2-203ENST00000554290 IDO1P14902 403 aa16.48■□□□□ 0.23
CPSF2-203ENST00000554290 FABP6P51161 128 aa16.48■□□□□ 0.23
CPSF2-203ENST00000554290 FOXG1P55316 489 aaPredicted RBP16.48■□□□□ 0.23
CPSF2-203ENST00000554290 COPZ1P61923 177 aa16.48■□□□□ 0.23
CPSF2-203ENST00000554290 OTUD3Q5T2D3 398 aaPredicted RBP16.48■□□□□ 0.23
CPSF2-203ENST00000554290 ATG16L1Q676U5 607 aa16.48■□□□□ 0.23
CPSF2-203ENST00000554290 NXNQ6DKJ4 435 aa16.48■□□□□ 0.23
CPSF2-203ENST00000554290 MUC15Q8N387 334 aa16.48■□□□□ 0.23
CPSF2-203ENST00000554290 SF3B5Q9BWJ5 86 aaKnown RBP16.48■□□□□ 0.23
CPSF2-203ENST00000554290 C1QTNF6Q9BXI9 259 aa16.48■□□□□ 0.23
CPSF2-203ENST00000554290 CACNG6Q9BXT2 260 aa16.48■□□□□ 0.23
CPSF2-203ENST00000554290 AMBRA1Q9C0C7 1298 aa16.48■□□□□ 0.23
CPSF2-203ENST00000554290 FKRPQ9H9S5 495 aa16.48■□□□□ 0.23
CPSF2-203ENST00000554290 SLC7A10Q9NS82 523 aa16.48■□□□□ 0.23
CPSF2-203ENST00000554290 P2RX2Q9UBL9 471 aa16.48■□□□□ 0.23
CPSF2-203ENST00000554290 RAB21Q9UL25 225 aa16.48■□□□□ 0.23
CPSF2-203ENST00000554290 AMDHD2Q9Y303 409 aa16.48■□□□□ 0.23
CPSF2-203ENST00000554290 ZC3H12DA2A288 527 aaKnown RBP16.47■□□□□ 0.23
CPSF2-203ENST00000554290 CDHR4A6H8M9 788 aa16.47■□□□□ 0.23
CPSF2-203ENST00000554290 PDLIM1O00151 329 aa16.47■□□□□ 0.23
CPSF2-203ENST00000554290 CD5LO43866 347 aa16.47■□□□□ 0.23
CPSF2-203ENST00000554290 ANP32DO95626 131 aa16.47■□□□□ 0.23
CPSF2-203ENST00000554290 KITP10721 976 aa16.47■□□□□ 0.23
CPSF2-203ENST00000554290 BMP4P12644 408 aa16.47■□□□□ 0.23
CPSF2-203ENST00000554290 CRATP43155 626 aa16.47■□□□□ 0.23
CPSF2-203ENST00000554290 CRISP3P54108 245 aa16.47■□□□□ 0.23
CPSF2-203ENST00000554290 DSCR9P59020 149 aa16.47■□□□□ 0.23
CPSF2-203ENST00000554290 RAB35Q15286 201 aa16.47■□□□□ 0.23
CPSF2-203ENST00000554290 ZSWIM7Q19AV6 140 aa16.47■□□□□ 0.23
CPSF2-203ENST00000554290 LIN52Q52LA3 116 aa16.47■□□□□ 0.23
CPSF2-203ENST00000554290 PDCD4Q53EL6 469 aaKnown RBP16.47■□□□□ 0.23
CPSF2-203ENST00000554290 TSPO2Q5TGU0 170 aa16.47■□□□□ 0.23
CPSF2-203ENST00000554290 C9orf135Q5VTT2 229 aa16.47■□□□□ 0.23
CPSF2-203ENST00000554290 ZNF544Q6NX49 715 aa16.47■□□□□ 0.23
CPSF2-203ENST00000554290 WDR31Q8NA23 367 aa16.47■□□□□ 0.23
CPSF2-203ENST00000554290 OR52P1PQ8NH57 321 aa16.47■□□□□ 0.23
CPSF2-203ENST00000554290 TMEM45BQ96B21 275 aa16.47■□□□□ 0.23
CPSF2-203ENST00000554290 ZBTB9Q96C00 473 aa16.47■□□□□ 0.23
CPSF2-203ENST00000554290 PIF1Q9H611 641 aa16.47■□□□□ 0.23
CPSF2-203ENST00000554290 ARMC7Q9H6L4 198 aa16.47■□□□□ 0.23
CPSF2-203ENST00000554290 CACYBPQ9HB71 228 aaKnown RBP16.47■□□□□ 0.23
CPSF2-203ENST00000554290 SLC17A5Q9NRA2 495 aa16.47■□□□□ 0.23
CPSF2-203ENST00000554290 RLIMQ9NVW2 624 aa16.47■□□□□ 0.23
CPSF2-203ENST00000554290 ZNF232Q9UNY5 417 aa16.47■□□□□ 0.23
CPSF2-203ENST00000554290 CADP27708 2225 aa16.46■□□□□ 0.23
CPSF2-203ENST00000554290 TMEM120BA0PK00 339 aa16.46■□□□□ 0.23
CPSF2-203ENST00000554290 FAM234BA2RU67 622 aa16.46■□□□□ 0.23
CPSF2-203ENST00000554290 TMEM247A6NEH6 219 aa16.46■□□□□ 0.23
CPSF2-203ENST00000554290 LIPT2A6NK58 231 aa16.46■□□□□ 0.23
CPSF2-203ENST00000554290 SNNO75324 88 aaPredicted RBP16.46■□□□□ 0.23
CPSF2-203ENST00000554290 WNT11O96014 354 aa16.46■□□□□ 0.23
CPSF2-203ENST00000554290 ZCCHC18P0CG32 403 aa16.46■□□□□ 0.23
CPSF2-203ENST00000554290 MPGP29372 298 aa16.46■□□□□ 0.23
CPSF2-203ENST00000554290 WDR4P57081 412 aaKnown RBP16.46■□□□□ 0.23
CPSF2-203ENST00000554290 PRPS1P60891 318 aa16.46■□□□□ 0.23
CPSF2-203ENST00000554290 IRX1P78414 480 aaPredicted RBP16.46■□□□□ 0.23
CPSF2-203ENST00000554290 SPOCK1Q08629 439 aa16.46■□□□□ 0.23
CPSF2-203ENST00000554290 CEACAM7Q14002 265 aa16.46■□□□□ 0.23
CPSF2-203ENST00000554290 LARS2Q15031 903 aaKnown RBP16.46■□□□□ 0.23
CPSF2-203ENST00000554290 OR7A5Q15622 319 aa16.46■□□□□ 0.23
CPSF2-203ENST00000554290 TMEM225Q6GV28 225 aa16.46■□□□□ 0.23
CPSF2-203ENST00000554290 WBP2NLQ6ICG8 309 aa16.46■□□□□ 0.23
CPSF2-203ENST00000554290 C11orf71Q6IPW1 123 aa16.46■□□□□ 0.23
CPSF2-203ENST00000554290 KLHL24Q6TFL4 600 aa16.46■□□□□ 0.23
CPSF2-203ENST00000554290 CLEC2AQ6UVW9 174 aa16.46■□□□□ 0.23
CPSF2-203ENST00000554290 AAED1Q7RTV5 226 aa16.46■□□□□ 0.23
CPSF2-203ENST00000554290 ABHD12BQ7Z5M8 362 aaPredicted RBP16.46■□□□□ 0.23
CPSF2-203ENST00000554290 VRK2Q86Y07 508 aa16.46■□□□□ 0.23
CPSF2-203ENST00000554290 CADM2Q8N3J6 435 aa16.46■□□□□ 0.23
CPSF2-203ENST00000554290 TMEM99Q8N816 258 aa16.46■□□□□ 0.23
CPSF2-203ENST00000554290 POMGNT2Q8NAT1 580 aa16.46■□□□□ 0.23
CPSF2-203ENST00000554290 TAPBPLQ9BX59 468 aa16.46■□□□□ 0.23
CPSF2-203ENST00000554290 RMND5AQ9H871 391 aa16.46■□□□□ 0.23
CPSF2-203ENST00000554290 YAE1D1Q9NRH1 226 aa16.46■□□□□ 0.23
CPSF2-203ENST00000554290 THUMPD1Q9NXG2 353 aaKnown RBP16.46■□□□□ 0.23
CPSF2-203ENST00000554290 ATP23Q9Y6H3 246 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms