RNA–Protein interactions for RNA: ENST00000553950.5

SHMT2-210, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-210ENST00000553950 MAGEE2Q8TD90 523 aaPredicted RBP13.08□□□□□ -0.32
SHMT2-210ENST00000553950 LIPHQ8WWY8 451 aa13.08□□□□□ -0.32
SHMT2-210ENST00000553950 CRELD1Q96HD1 420 aa13.08□□□□□ -0.32
SHMT2-210ENST00000553950 FAM46AQ96IP4 442 aaKnown RBP13.08□□□□□ -0.32
SHMT2-210ENST00000553950 PRRG3Q9BZD7 231 aa13.08□□□□□ -0.32
SHMT2-210ENST00000553950 UCK2Q9BZX2 261 aa13.08□□□□□ -0.32
SHMT2-210ENST00000553950 SLC6A15Q9H2J7 730 aa13.08□□□□□ -0.32
SHMT2-210ENST00000553950 MEPEQ9NQ76 525 aaPredicted RBP13.08□□□□□ -0.32
SHMT2-210ENST00000553950 TIGARQ9NQ88 270 aa13.08□□□□□ -0.32
SHMT2-210ENST00000553950 NANSQ9NR45 359 aa13.08□□□□□ -0.32
SHMT2-210ENST00000553950 ALKBH4Q9NXW9 302 aa13.08□□□□□ -0.32
SHMT2-210ENST00000553950 SMPD3Q9NY59 655 aaPredicted RBP13.08□□□□□ -0.32
SHMT2-210ENST00000553950 TRAPPC4Q9Y296 219 aa13.08□□□□□ -0.32
SHMT2-210ENST00000553950 CFAP47Q6ZTR5 3102 aa13.07□□□□□ -0.32
SHMT2-210ENST00000553950 ZNF407Q9C0G0 2248 aa13.07□□□□□ -0.32
SHMT2-210ENST00000553950 OR14I1A6ND48 311 aa13.07□□□□□ -0.32
SHMT2-210ENST00000553950 SHISA8B8ZZ34 492 aa13.07□□□□□ -0.32
SHMT2-210ENST00000553950 PDLIM1O00151 329 aa13.07□□□□□ -0.32
SHMT2-210ENST00000553950 SOCS2O14508 198 aa13.07□□□□□ -0.32
SHMT2-210ENST00000553950 AQP7O14520 342 aa13.07□□□□□ -0.32
SHMT2-210ENST00000553950 PIP5K1CO60331 668 aa13.07□□□□□ -0.32
SHMT2-210ENST00000553950 EIF1BO60739 113 aaKnown RBP13.07□□□□□ -0.32
SHMT2-210ENST00000553950 HIST1H2ABP04908 130 aa13.07□□□□□ -0.32
SHMT2-210ENST00000553950 PRPS1P60891 318 aa13.07□□□□□ -0.32
SHMT2-210ENST00000553950 ESRRGP62508 458 aa13.07□□□□□ -0.32
SHMT2-210ENST00000553950 SLC35A1P78382 337 aa13.07□□□□□ -0.32
SHMT2-210ENST00000553950 EGR4Q05215 589 aa13.07□□□□□ -0.32
SHMT2-210ENST00000553950 LAPTM4AQ15012 233 aa13.07□□□□□ -0.32
SHMT2-210ENST00000553950 PLEKHN1Q494U1 663 aaPredicted RBP13.07□□□□□ -0.32
SHMT2-210ENST00000553950 NADK2Q4G0N4 442 aa13.07□□□□□ -0.32
SHMT2-210ENST00000553950 KRTCAP3Q53RY4 240 aa13.07□□□□□ -0.32
SHMT2-210ENST00000553950 CMPK2Q5EBM0 449 aa13.07□□□□□ -0.32
SHMT2-210ENST00000553950 ARHGAP11AQ6P4F7 1023 aa13.07□□□□□ -0.32
SHMT2-210ENST00000553950 RASSF6Q6ZTQ3 369 aa13.07□□□□□ -0.32
SHMT2-210ENST00000553950 TRILQ7L0X0 811 aa13.07□□□□□ -0.32
SHMT2-210ENST00000553950 HIST3H2AQ7L7L0 130 aa13.07□□□□□ -0.32
SHMT2-210ENST00000553950 NANOGNBQ7Z5D8 188 aa13.07□□□□□ -0.32
SHMT2-210ENST00000553950 HS3ST5Q8IZT8 346 aa13.07□□□□□ -0.32
SHMT2-210ENST00000553950 GHDCQ8N2G8 530 aa13.07□□□□□ -0.32
SHMT2-210ENST00000553950 ADPRHL1Q8NDY3 354 aa13.07□□□□□ -0.32
SHMT2-210ENST00000553950 OR52L1Q8NGH7 329 aa13.07□□□□□ -0.32
SHMT2-210ENST00000553950 FANK1Q8TC84 345 aa13.07□□□□□ -0.32
SHMT2-210ENST00000553950 SMPDL3BQ92485 455 aa13.07□□□□□ -0.32
SHMT2-210ENST00000553950 HIST1H2ACQ93077 130 aa13.07□□□□□ -0.32
SHMT2-210ENST00000553950 ABTB1Q969K4 478 aaPredicted RBP13.07□□□□□ -0.32
SHMT2-210ENST00000553950 GTPBP3Q969Y2 492 aaKnown RBP13.07□□□□□ -0.32
SHMT2-210ENST00000553950 CPNE4Q96A23 557 aaPredicted RBP13.07□□□□□ -0.32
SHMT2-210ENST00000553950 MIB2Q96AX9 1013 aa13.07□□□□□ -0.32
SHMT2-210ENST00000553950 SARAFQ96BY9 339 aa13.07□□□□□ -0.32
SHMT2-210ENST00000553950 ZNF524Q96C55 264 aa13.07□□□□□ -0.32
SHMT2-210ENST00000553950 OR5B2Q96R09 309 aa13.07□□□□□ -0.32
SHMT2-210ENST00000553950 TEX12Q9BXU0 123 aa13.07□□□□□ -0.32
SHMT2-210ENST00000553950 COQ10BQ9H8M1 238 aa13.07□□□□□ -0.32
SHMT2-210ENST00000553950 PLSCR2Q9NRY7 297 aa13.07□□□□□ -0.32
SHMT2-210ENST00000553950 A0A1B0GVC2 190 aa13.06□□□□□ -0.32
SHMT2-210ENST00000553950 UNC119BA6NIH7 251 aa13.06□□□□□ -0.32
SHMT2-210ENST00000553950 KLF4O43474 513 aa13.06□□□□□ -0.32
SHMT2-210ENST00000553950 RCBTB2O95199 551 aa13.06□□□□□ -0.32
SHMT2-210ENST00000553950 OSMP13725 252 aa13.06□□□□□ -0.32
SHMT2-210ENST00000553950 ZNF26P17031 533 aaPredicted RBP13.06□□□□□ -0.32
SHMT2-210ENST00000553950 SFTPDP35247 375 aa13.06□□□□□ -0.32
SHMT2-210ENST00000553950 RPS5P46782 204 aaKnown RBP13.06□□□□□ -0.32
SHMT2-210ENST00000553950 MYBPHQ13203 477 aa13.06□□□□□ -0.32
SHMT2-210ENST00000553950 SF3B4Q15427 424 aaKnown RBP eCLIP13.06□□□□□ -0.327e-19■■■■□ 22
SHMT2-210ENST00000553950 C19orf48Q6RUI8 117 aa13.06□□□□□ -0.32
SHMT2-210ENST00000553950 TBPL2Q6SJ96 375 aa13.06□□□□□ -0.32
SHMT2-210ENST00000553950 ZNF620Q6ZNG0 422 aa13.06□□□□□ -0.32
SHMT2-210ENST00000553950 ZER1Q7Z7L7 766 aa13.06□□□□□ -0.32
SHMT2-210ENST00000553950 OAFQ86UD1 273 aa13.06□□□□□ -0.32
SHMT2-210ENST00000553950 SIAH3Q8IW03 269 aa13.06□□□□□ -0.32
SHMT2-210ENST00000553950 ATP6V1C2Q8NEY4 427 aa13.06□□□□□ -0.32
SHMT2-210ENST00000553950 OR5M1Q8NGP8 315 aa13.06□□□□□ -0.32
SHMT2-210ENST00000553950 TEX47Q8TBZ9 253 aa13.06□□□□□ -0.32
SHMT2-210ENST00000553950 OSTF1Q92882 214 aa13.06□□□□□ -0.32
SHMT2-210ENST00000553950 KTI12Q96EK9 354 aaPredicted RBP13.06□□□□□ -0.32
SHMT2-210ENST00000553950 CNTNAP3BQ96NU0 1288 aa13.06□□□□□ -0.32
SHMT2-210ENST00000553950 UBL7Q96S82 380 aaPredicted RBP13.06□□□□□ -0.32
SHMT2-210ENST00000553950 PTDSS2Q9BVG9 487 aa13.06□□□□□ -0.32
SHMT2-210ENST00000553950 GABARAPL3Q9BY60 117 aa13.06□□□□□ -0.32
SHMT2-210ENST00000553950 CNTNAP3Q9BZ76 1288 aa13.06□□□□□ -0.32
SHMT2-210ENST00000553950 OR11A1Q9GZK7 315 aa13.06□□□□□ -0.32
SHMT2-210ENST00000553950 TMEM185BQ9H7F4 350 aa13.06□□□□□ -0.32
SHMT2-210ENST00000553950 C20orf141Q9NUB4 165 aa13.06□□□□□ -0.32
SHMT2-210ENST00000553950 MRPL39Q9NYK5 338 aaKnown RBP13.06□□□□□ -0.32
SHMT2-210ENST00000553950 CDH10Q9Y6N8 788 aa13.06□□□□□ -0.32
SHMT2-210ENST00000553950 PKD1L2Q7Z442 2459 aa13.06□□□□□ -0.32
SHMT2-210ENST00000553950 ZC3H12DA2A288 527 aaKnown RBP13.05□□□□□ -0.32
SHMT2-210ENST00000553950 LIPT2A6NK58 231 aa13.05□□□□□ -0.32
SHMT2-210ENST00000553950 NPIPA5E9PKD4 350 aa13.05□□□□□ -0.32
SHMT2-210ENST00000553950 SULT2B1O00204 365 aa13.05□□□□□ -0.32
SHMT2-210ENST00000553950 BCKDKO14874 412 aa13.05□□□□□ -0.32
SHMT2-210ENST00000553950 SEC14L5O43304 696 aa13.05□□□□□ -0.32
SHMT2-210ENST00000553950 OR6A2O95222 327 aa13.05□□□□□ -0.32
SHMT2-210ENST00000553950 CH25HO95992 272 aa13.05□□□□□ -0.32
SHMT2-210ENST00000553950 GASTP01350 101 aa13.05□□□□□ -0.32
SHMT2-210ENST00000553950 BGLAPP02818 100 aa13.05□□□□□ -0.32
SHMT2-210ENST00000553950 CELA3AP09093 270 aa13.05□□□□□ -0.32
SHMT2-210ENST00000553950 ZNF708P17019 499 aa13.05□□□□□ -0.32
SHMT2-210ENST00000553950 BMP7P18075 431 aa13.05□□□□□ -0.32
SHMT2-210ENST00000553950 PRKACGP22612 351 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms