RNA–Protein interactions for RNA: ENST00000553949.1

SHMT2-209, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-209ENST00000553949 TAAR8Q969N4 342 aa10.98□□□□□ -0.65
SHMT2-209ENST00000553949 PTDSS2Q9BVG9 487 aa10.98□□□□□ -0.65
SHMT2-209ENST00000553949 SRXN1Q9BYN0 137 aa10.98□□□□□ -0.65
SHMT2-209ENST00000553949 MEPEQ9NQ76 525 aaPredicted RBP10.98□□□□□ -0.65
SHMT2-209ENST00000553949 TIGARQ9NQ88 270 aa10.98□□□□□ -0.65
SHMT2-209ENST00000553949 ARMC1Q9NVT9 282 aa10.98□□□□□ -0.65
SHMT2-209ENST00000553949 PAQR5Q9NXK6 330 aaPredicted RBP10.98□□□□□ -0.65
SHMT2-209ENST00000553949 TRAPPC4Q9Y296 219 aa10.98□□□□□ -0.65
SHMT2-209ENST00000553949 MED31Q9Y3C7 131 aa10.98□□□□□ -0.65
SHMT2-209ENST00000553949 SHANK1Q9Y566 2161 aa10.98□□□□□ -0.65
SHMT2-209ENST00000553949 MED12Q93074 2177 aa10.97□□□□□ -0.65
SHMT2-209ENST00000553949 A0A087WUU8 490 aa10.97□□□□□ -0.65
SHMT2-209ENST00000553949 TRGV8A0A0C4DH27 118 aa10.97□□□□□ -0.65
SHMT2-209ENST00000553949 TRBV4-1A0A0J9YWV2 114 aa10.97□□□□□ -0.65
SHMT2-209ENST00000553949 LIPT2A6NK58 231 aa10.97□□□□□ -0.65
SHMT2-209ENST00000553949 FTCDNL1E5RQL4 147 aa10.97□□□□□ -0.65
SHMT2-209ENST00000553949 TNFRSF11BO00300 401 aa10.97□□□□□ -0.65
SHMT2-209ENST00000553949 OR2T1O43869 369 aa10.97□□□□□ -0.65
SHMT2-209ENST00000553949 TIPRLO75663 272 aa10.97□□□□□ -0.65
SHMT2-209ENST00000553949 CST1P01037 141 aa10.97□□□□□ -0.65
SHMT2-209ENST00000553949 STSP08842 583 aa10.97□□□□□ -0.65
SHMT2-209ENST00000553949 HOXD4P09016 255 aaPredicted RBP10.97□□□□□ -0.65
SHMT2-209ENST00000553949 CA7P43166 264 aa10.97□□□□□ -0.65
SHMT2-209ENST00000553949 HMGA2P52926 109 aa10.97□□□□□ -0.65
SHMT2-209ENST00000553949 OR2B6P58173 313 aa10.97□□□□□ -0.65
SHMT2-209ENST00000553949 RAC3P60763 192 aa10.97□□□□□ -0.65
SHMT2-209ENST00000553949 SLC35A1P78382 337 aa10.97□□□□□ -0.65
SHMT2-209ENST00000553949 LSM11P83369 360 aaKnown RBP eCLIP10.97□□□□□ -0.65
SHMT2-209ENST00000553949 PON3Q15166 354 aa10.97□□□□□ -0.65
SHMT2-209ENST00000553949 SEC23BQ15437 767 aa10.97□□□□□ -0.65
SHMT2-209ENST00000553949 OR7A5Q15622 319 aa10.97□□□□□ -0.65
SHMT2-209ENST00000553949 C1orf185Q5T7R7 199 aa10.97□□□□□ -0.65
SHMT2-209ENST00000553949 RTL6Q6ICC9 239 aa10.97□□□□□ -0.65
SHMT2-209ENST00000553949 ZFP1Q6P2D0 407 aa10.97□□□□□ -0.65
SHMT2-209ENST00000553949 TBPL2Q6SJ96 375 aa10.97□□□□□ -0.65
SHMT2-209ENST00000553949 RPTNQ6XPR3 784 aa10.97□□□□□ -0.65
SHMT2-209ENST00000553949 C3P1Q6ZMU1 363 aa10.97□□□□□ -0.65
SHMT2-209ENST00000553949 ZNF730Q6ZMV8 503 aa10.97□□□□□ -0.65
SHMT2-209ENST00000553949 MBOAT2Q6ZWT7 520 aa10.97□□□□□ -0.65
SHMT2-209ENST00000553949 ADGRE4PQ86SQ3 457 aa10.97□□□□□ -0.65
SHMT2-209ENST00000553949 PFN4Q8NHR9 129 aa10.97□□□□□ -0.65
SHMT2-209ENST00000553949 MFSD8Q8NHS3 518 aa10.97□□□□□ -0.65
SHMT2-209ENST00000553949 CPNE4Q96A23 557 aaPredicted RBP10.97□□□□□ -0.65
SHMT2-209ENST00000553949 ALPK1Q96QP1 1244 aa10.97□□□□□ -0.65
SHMT2-209ENST00000553949 UCN2Q96RP3 112 aa10.97□□□□□ -0.65
SHMT2-209ENST00000553949 TRIB1Q96RU8 372 aa10.97□□□□□ -0.65
SHMT2-209ENST00000553949 FUZQ9BT04 418 aa10.97□□□□□ -0.65
SHMT2-209ENST00000553949 TAPBPLQ9BX59 468 aa10.97□□□□□ -0.65
SHMT2-209ENST00000553949 REEP1Q9H902 201 aa10.97□□□□□ -0.65
SHMT2-209ENST00000553949 CALHM2Q9HA72 323 aa10.97□□□□□ -0.65
SHMT2-209ENST00000553949 DNAJB9Q9UBS3 223 aa10.97□□□□□ -0.65
SHMT2-209ENST00000553949 SH3BGRL2Q9UJC5 107 aa10.97□□□□□ -0.65
SHMT2-209ENST00000553949 SAMHD1Q9Y3Z3 626 aaKnown RBP10.97□□□□□ -0.65
SHMT2-209ENST00000553949 FAM215AQ9Y5M1 114 aa10.97□□□□□ -0.65
SHMT2-209ENST00000553949 LYVE1Q9Y5Y7 322 aa10.97□□□□□ -0.65
SHMT2-209ENST00000553949 FREM3P0C091 2139 aa10.96□□□□□ -0.65
SHMT2-209ENST00000553949 SH3PXD2BA1X283 911 aa10.96□□□□□ -0.65
SHMT2-209ENST00000553949 CD8B2A6NJW9 211 aa10.96□□□□□ -0.65
SHMT2-209ENST00000553949 SLC22A20A6NK97 555 aa10.96□□□□□ -0.65
SHMT2-209ENST00000553949 KDM4EB2RXH2 506 aaPredicted RBP10.96□□□□□ -0.65
SHMT2-209ENST00000553949 H3BNX3 289 aa10.96□□□□□ -0.65
SHMT2-209ENST00000553949 GNGT2O14610 69 aa10.96□□□□□ -0.65
SHMT2-209ENST00000553949 HNRNPRO43390 633 aaKnown RBP10.96□□□□□ -0.65
SHMT2-209ENST00000553949 DNPH1O43598 174 aa10.96□□□□□ -0.65
SHMT2-209ENST00000553949 PIP5K1CO60331 668 aa10.96□□□□□ -0.65
SHMT2-209ENST00000553949 SYNGR4O95473 234 aa10.96□□□□□ -0.65
SHMT2-209ENST00000553949 IGF2P01344 180 aa10.96□□□□□ -0.65
SHMT2-209ENST00000553949 BGLAPP02818 100 aa10.96□□□□□ -0.65
SHMT2-209ENST00000553949 FCGR1AP12314 374 aa10.96□□□□□ -0.65
SHMT2-209ENST00000553949 FPR1P21462 350 aa10.96□□□□□ -0.65
SHMT2-209ENST00000553949 ENPP1P22413 925 aa10.96□□□□□ -0.65
SHMT2-209ENST00000553949 LIMS1P48059 325 aa10.96□□□□□ -0.65
SHMT2-209ENST00000553949 AGFG1P52594 562 aaKnown RBP10.96□□□□□ -0.65
SHMT2-209ENST00000553949 LTBQ06643 244 aa10.96□□□□□ -0.65
SHMT2-209ENST00000553949 ZNF74Q16587 644 aa10.96□□□□□ -0.65
SHMT2-209ENST00000553949 ZNF239Q16600 458 aaKnown RBP10.96□□□□□ -0.65
SHMT2-209ENST00000553949 EXOC3L2Q2M3D2 409 aa10.96□□□□□ -0.65
SHMT2-209ENST00000553949 EIF2S3LQ2VIR3 472 aaKnown RBP10.96□□□□□ -0.65
SHMT2-209ENST00000553949 FAM69AQ5T7M9 428 aa10.96□□□□□ -0.65
SHMT2-209ENST00000553949 NSUN5P2Q63ZY6 315 aa10.96□□□□□ -0.65
SHMT2-209ENST00000553949 PPP4R4Q6NUP7 873 aa10.96□□□□□ -0.65
SHMT2-209ENST00000553949 PLXDC2Q6UX71 529 aa10.96□□□□□ -0.65
SHMT2-209ENST00000553949 RRM2BQ7LG56 351 aa10.96□□□□□ -0.65
SHMT2-209ENST00000553949 NRMQ8IXM6 262 aa10.96□□□□□ -0.65
SHMT2-209ENST00000553949 RNF113BQ8IZP6 322 aaKnown RBP10.96□□□□□ -0.65
SHMT2-209ENST00000553949 C10orf53Q8N6V4 93 aa10.96□□□□□ -0.65
SHMT2-209ENST00000553949 OR4C15Q8NGM1 316 aa10.96□□□□□ -0.65
SHMT2-209ENST00000553949 OR6S1Q8NH40 331 aa10.96□□□□□ -0.65
SHMT2-209ENST00000553949 FNDC9Q8TBE3 224 aa10.96□□□□□ -0.65
SHMT2-209ENST00000553949 SLC25A36Q96CQ1 311 aa10.96□□□□□ -0.65
SHMT2-209ENST00000553949 MOGAT1Q96PD6 335 aa10.96□□□□□ -0.65
SHMT2-209ENST00000553949 KLHL4Q9C0H6 718 aa10.96□□□□□ -0.65
SHMT2-209ENST00000553949 S100A14Q9HCY8 104 aa10.96□□□□□ -0.65
SHMT2-209ENST00000553949 C20orf141Q9NUB4 165 aa10.96□□□□□ -0.65
SHMT2-209ENST00000553949 VNN3Q9NY84 501 aa10.96□□□□□ -0.65
SHMT2-209ENST00000553949 CLCF1Q9UBD9 225 aa10.96□□□□□ -0.65
SHMT2-209ENST00000553949 MCTS1Q9ULC4 181 aaKnown RBP10.96□□□□□ -0.65
SHMT2-209ENST00000553949 TMCC3Q9ULS5 477 aa10.96□□□□□ -0.65
SHMT2-209ENST00000553949 ZNF175Q9Y473 711 aa10.96□□□□□ -0.65
SHMT2-209ENST00000553949 U3KQV3 271 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms