RNA–Protein interactions for RNA: ENST00000553947.1

AL049839.2-201, humanhuman

APPRIS P1 TSL 2 BASIC

Gene AL049839.2, Length 3,067 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL049839.2-201ENST00000553947 MCATQ8IVS2 390 aaKnown RBP8.34□□□□□ -1.07
AL049839.2-201ENST00000553947 NANOGP1Q8N7R0 232 aa8.34□□□□□ -1.07
AL049839.2-201ENST00000553947 PRRC1Q96M27 445 aa8.34□□□□□ -1.07
AL049839.2-201ENST00000553947 PFDN5Q99471 154 aa8.34□□□□□ -1.07
AL049839.2-201ENST00000553947 TMED9Q9BVK6 235 aa8.34□□□□□ -1.07
AL049839.2-201ENST00000553947 TSSK6Q9BXA6 273 aa8.34□□□□□ -1.07
AL049839.2-201ENST00000553947 PLA2G12AQ9BZM1 189 aa8.34□□□□□ -1.07
AL049839.2-201ENST00000553947 SEMA4CQ9C0C4 833 aa8.34□□□□□ -1.07
AL049839.2-201ENST00000553947 FBRSQ9HAH7 460 aa8.34□□□□□ -1.07
AL049839.2-201ENST00000553947 MYEF2Q9P2K5 600 aaKnown RBP8.34□□□□□ -1.07
AL049839.2-201ENST00000553947 MBD2Q9UBB5 411 aa8.34□□□□□ -1.07
AL049839.2-201ENST00000553947 RPL36Q9Y3U8 105 aaKnown RBP8.34□□□□□ -1.07
AL049839.2-201ENST00000553947 TCRBV21S2A2A0A5A6 115 aa8.34□□□□□ -1.07
AL049839.2-201ENST00000553947 OR6C74A6NCV1 312 aa8.34□□□□□ -1.07
AL049839.2-201ENST00000553947 TXNL1O43396 289 aa8.34□□□□□ -1.07
AL049839.2-201ENST00000553947 SPDEFO95238 335 aa8.34□□□□□ -1.07
AL049839.2-201ENST00000553947 APBB3O95704 486 aa8.34□□□□□ -1.07
AL049839.2-201ENST00000553947 SMIM10L1P0DMW3 83 aa8.34□□□□□ -1.07
AL049839.2-201ENST00000553947 PEPDP12955 493 aa8.34□□□□□ -1.07
AL049839.2-201ENST00000553947 GABRG2P18507 467 aa8.34□□□□□ -1.07
AL049839.2-201ENST00000553947 ELK1P19419 428 aa8.34□□□□□ -1.07
AL049839.2-201ENST00000553947 CXCL2P19875 107 aa8.34□□□□□ -1.07
AL049839.2-201ENST00000553947 RAB30Q15771 203 aa8.34□□□□□ -1.07
AL049839.2-201ENST00000553947 OR2G6Q5TZ20 316 aa8.34□□□□□ -1.07
AL049839.2-201ENST00000553947 MARCH9Q86YJ5 346 aa8.34□□□□□ -1.07
AL049839.2-201ENST00000553947 SPAG16Q8N0X2 631 aa8.34□□□□□ -1.07
AL049839.2-201ENST00000553947 SLC22A18ASQ8N1D0 253 aa8.34□□□□□ -1.07
AL049839.2-201ENST00000553947 UXS1Q8NBZ7 420 aa8.34□□□□□ -1.07
AL049839.2-201ENST00000553947 NEIL3Q8TAT5 605 aa8.34□□□□□ -1.07
AL049839.2-201ENST00000553947 NT5CQ8TCD5 201 aa8.34□□□□□ -1.07
AL049839.2-201ENST00000553947 CNOT9Q92600 299 aaKnown RBP8.34□□□□□ -1.07
AL049839.2-201ENST00000553947 RNFT2Q96EX2 444 aa8.34□□□□□ -1.07
AL049839.2-201ENST00000553947 SMIM10Q96HG1 83 aa8.34□□□□□ -1.07
AL049839.2-201ENST00000553947 GAS2L1Q99501 681 aaPredicted RBP8.34□□□□□ -1.07
AL049839.2-201ENST00000553947 PINK1Q9BXM7 581 aa8.34□□□□□ -1.07
AL049839.2-201ENST00000553947 GSDMCQ9BYG8 508 aa8.34□□□□□ -1.07
AL049839.2-201ENST00000553947 EGLN3Q9H6Z9 239 aa8.34□□□□□ -1.07
AL049839.2-201ENST00000553947 SEMA4GQ9NTN9 838 aa8.34□□□□□ -1.07
AL049839.2-201ENST00000553947 MED9Q9NWA0 146 aa8.34□□□□□ -1.07
AL049839.2-201ENST00000553947 MED11Q9P086 117 aa8.34□□□□□ -1.07
AL049839.2-201ENST00000553947 KCNK7Q9Y2U2 307 aa8.34□□□□□ -1.07
AL049839.2-201ENST00000553947 LSM2Q9Y333 95 aaKnown RBP8.34□□□□□ -1.07
AL049839.2-201ENST00000553947 BRWD1Q9NSI6 2320 aa8.34□□□□□ -1.08
AL049839.2-201ENST00000553947 A0A087WUU8 490 aa8.33□□□□□ -1.08
AL049839.2-201ENST00000553947 CENPVL1A0A0U1RR11 272 aa8.33□□□□□ -1.08
AL049839.2-201ENST00000553947 CPSF4LA6NMK7 179 aaKnown RBP8.33□□□□□ -1.08
AL049839.2-201ENST00000553947 TLX2O43763 284 aaPredicted RBP8.33□□□□□ -1.08
AL049839.2-201ENST00000553947 CD3GP09693 182 aa8.33□□□□□ -1.08
AL049839.2-201ENST00000553947 SMIM6P0DI80 62 aa8.33□□□□□ -1.08
AL049839.2-201ENST00000553947 SULT1A3P0DMM9 295 aa8.33□□□□□ -1.08
AL049839.2-201ENST00000553947 SULT1A4P0DMN0 295 aa8.33□□□□□ -1.08
AL049839.2-201ENST00000553947 NDUFS1P28331 727 aa8.33□□□□□ -1.08
AL049839.2-201ENST00000553947 PPP1CAP62136 330 aa8.33□□□□□ -1.08
AL049839.2-201ENST00000553947 GINS1Q14691 196 aa8.33□□□□□ -1.08
AL049839.2-201ENST00000553947 SMCO1Q147U7 214 aa8.33□□□□□ -1.08
AL049839.2-201ENST00000553947 TRAM2Q15035 370 aa8.33□□□□□ -1.08
AL049839.2-201ENST00000553947 TMEM201Q5SNT2 666 aa8.33□□□□□ -1.08
AL049839.2-201ENST00000553947 C1orf94Q6P1W5 598 aa8.33□□□□□ -1.08
AL049839.2-201ENST00000553947 FIGLAQ6QHK4 219 aa8.33□□□□□ -1.08
AL049839.2-201ENST00000553947 IL20RBQ6UXL0 311 aa8.33□□□□□ -1.08
AL049839.2-201ENST00000553947 Q6ZSR6 202 aa8.33□□□□□ -1.08
AL049839.2-201ENST00000553947 PRICKLE2Q7Z3G6 844 aa8.33□□□□□ -1.08
AL049839.2-201ENST00000553947 RELL2Q8NC24 303 aaPredicted RBP8.33□□□□□ -1.08
AL049839.2-201ENST00000553947 OR13H1Q8NG92 308 aa8.33□□□□□ -1.08
AL049839.2-201ENST00000553947 CDS1Q92903 461 aa8.33□□□□□ -1.08
AL049839.2-201ENST00000553947 MOAP1Q96BY2 351 aa8.33□□□□□ -1.08
AL049839.2-201ENST00000553947 ZFP3Q96NJ6 502 aa8.33□□□□□ -1.08
AL049839.2-201ENST00000553947 MNTQ99583 582 aa8.33□□□□□ -1.08
AL049839.2-201ENST00000553947 ATF6BQ99941 703 aa8.33□□□□□ -1.08
AL049839.2-201ENST00000553947 SPATA5L1Q9BVQ7 753 aa8.33□□□□□ -1.08
AL049839.2-201ENST00000553947 TWSG1Q9GZX9 223 aa8.33□□□□□ -1.08
AL049839.2-201ENST00000553947 NANSQ9NR45 359 aa8.33□□□□□ -1.08
AL049839.2-201ENST00000553947 MGAT4CQ9UBM8 478 aa8.33□□□□□ -1.08
AL049839.2-201ENST00000553947 CD207Q9UJ71 328 aa8.33□□□□□ -1.08
AL049839.2-201ENST00000553947 PILRAQ9UKJ1 303 aa8.33□□□□□ -1.08
AL049839.2-201ENST00000553947 DTX4Q9Y2E6 619 aa8.33□□□□□ -1.08
AL049839.2-201ENST00000553947 COL4A2P08572 1712 aa8.33□□□□□ -1.08
AL049839.2-201ENST00000553947 FXYD6-FXYD2A0A087WZ82 144 aa8.33□□□□□ -1.08
AL049839.2-201ENST00000553947 C2orf92A0A1B0GVN3 265 aa8.33□□□□□ -1.08
AL049839.2-201ENST00000553947 SHISA7A6NL88 538 aa8.33□□□□□ -1.08
AL049839.2-201ENST00000553947 GPR31O00270 319 aa8.33□□□□□ -1.08
AL049839.2-201ENST00000553947 SULT1C2O00338 296 aa8.33□□□□□ -1.08
AL049839.2-201ENST00000553947 HPXP02790 462 aa8.33□□□□□ -1.08
AL049839.2-201ENST00000553947 SLC35G6P0C7Q6 338 aa8.33□□□□□ -1.08
AL049839.2-201ENST00000553947 STARP49675 285 aa8.33□□□□□ -1.08
AL049839.2-201ENST00000553947 SMIM11AP58511 58 aa8.33□□□□□ -1.08
AL049839.2-201ENST00000553947 MLLT1Q03111 559 aaPredicted RBP8.33□□□□□ -1.08
AL049839.2-201ENST00000553947 TGM3Q08188 693 aa8.33□□□□□ -1.08
AL049839.2-201ENST00000553947 MAP4K2Q12851 820 aa8.33□□□□□ -1.08
AL049839.2-201ENST00000553947 PLK5Q496M5 336 aa8.33□□□□□ -1.08
AL049839.2-201ENST00000553947 BEND4Q6ZU67 534 aa8.33□□□□□ -1.08
AL049839.2-201ENST00000553947 ZNF761Q86XN6 746 aaPredicted RBP8.33□□□□□ -1.08
AL049839.2-201ENST00000553947 TMEM52Q8NDY8 209 aa8.33□□□□□ -1.08
AL049839.2-201ENST00000553947 NR4A3Q92570 626 aa8.33□□□□□ -1.08
AL049839.2-201ENST00000553947 FGF11Q92914 225 aa8.33□□□□□ -1.08
AL049839.2-201ENST00000553947 SENP5Q96HI0 755 aaPredicted RBP8.33□□□□□ -1.08
AL049839.2-201ENST00000553947 ARHGDIGQ99819 225 aa8.33□□□□□ -1.08
AL049839.2-201ENST00000553947 ACTRT3Q9BYD9 372 aa8.33□□□□□ -1.08
AL049839.2-201ENST00000553947 FXYD6Q9H0Q3 95 aa8.33□□□□□ -1.08
AL049839.2-201ENST00000553947 OR51M1Q9H341 326 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms