RNA–Protein interactions for RNA: ENST00000553923.1

SRP54-204, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-204ENST00000553923 MARCH9Q86YJ5 346 aa1.86□□□□□ -2.11
SRP54-204ENST00000553923 LACC1Q8IV20 430 aa1.86□□□□□ -2.11
SRP54-204ENST00000553923 SLC22A15Q8IZD6 547 aa1.86□□□□□ -2.11
SRP54-204ENST00000553923 KIR3DL3Q8N743 410 aa1.86□□□□□ -2.11
SRP54-204ENST00000553923 FAM86B1Q8N7N1 296 aa1.86□□□□□ -2.11
SRP54-204ENST00000553923 PRSS33Q8NF86 280 aa1.86□□□□□ -2.11
SRP54-204ENST00000553923 B3GNT7Q8NFL0 401 aa1.86□□□□□ -2.11
SRP54-204ENST00000553923 OR7G2Q8NG99 324 aa1.86□□□□□ -2.11
SRP54-204ENST00000553923 OR4D9Q8NGE8 314 aa1.86□□□□□ -2.11
SRP54-204ENST00000553923 OR52B6Q8NGF0 335 aa1.86□□□□□ -2.11
SRP54-204ENST00000553923 OR52I1Q8NGK6 324 aa1.86□□□□□ -2.11
SRP54-204ENST00000553923 ZPLD1Q8TCW7 415 aa1.86□□□□□ -2.11
SRP54-204ENST00000553923 MAGEE2Q8TD90 523 aaPredicted RBP1.86□□□□□ -2.11
SRP54-204ENST00000553923 AENQ8WTP8 325 aaKnown RBP1.86□□□□□ -2.11
SRP54-204ENST00000553923 PCNPQ8WW12 178 aaKnown RBP1.86□□□□□ -2.11
SRP54-204ENST00000553923 TRUB1Q8WWH5 349 aaKnown RBP1.86□□□□□ -2.11
SRP54-204ENST00000553923 HPSE2Q8WWQ2 592 aa1.86□□□□□ -2.11
SRP54-204ENST00000553923 OR1E3Q8WZA6 343 aa1.86□□□□□ -2.11
SRP54-204ENST00000553923 DYRK2Q92630 601 aa1.86□□□□□ -2.11
SRP54-204ENST00000553923 UBE2E3Q969T4 207 aa1.86□□□□□ -2.11
SRP54-204ENST00000553923 ASB9Q96DX5 294 aa1.86□□□□□ -2.11
SRP54-204ENST00000553923 NUS1Q96E22 293 aa1.86□□□□□ -2.11
SRP54-204ENST00000553923 DNAJA3Q96EY1 480 aa1.86□□□□□ -2.11
SRP54-204ENST00000553923 MS4A14Q96JA4 679 aa1.86□□□□□ -2.11
SRP54-204ENST00000553923 CAPNS2Q96L46 248 aa1.86□□□□□ -2.11
SRP54-204ENST00000553923 CATSPER2Q96P56 530 aa1.86□□□□□ -2.11
SRP54-204ENST00000553923 TGS1Q96RS0 853 aaKnown RBP1.86□□□□□ -2.11
SRP54-204ENST00000553923 MBOAT4Q96T53 435 aa1.86□□□□□ -2.11
SRP54-204ENST00000553923 RNF2Q99496 336 aa1.86□□□□□ -2.11
SRP54-204ENST00000553923 SLC29A1Q99808 456 aa1.86□□□□□ -2.11
SRP54-204ENST00000553923 TMEM246Q9BRR3 403 aa1.86□□□□□ -2.11
SRP54-204ENST00000553923 LLPHQ9BRT6 129 aaKnown RBP1.86□□□□□ -2.11
SRP54-204ENST00000553923 HINT2Q9BX68 163 aa1.86□□□□□ -2.11
SRP54-204ENST00000553923 PINK1Q9BXM7 581 aa1.86□□□□□ -2.11
SRP54-204ENST00000553923 DGCR6LQ9BY27 220 aa1.86□□□□□ -2.11
SRP54-204ENST00000553923 ILKAPQ9H0C8 392 aaPredicted RBP1.86□□□□□ -2.11
SRP54-204ENST00000553923 ATP13A3Q9H7F0 1226 aa1.86□□□□□ -2.11
SRP54-204ENST00000553923 NHEJ1Q9H9Q4 299 aaPredicted RBP1.86□□□□□ -2.11
SRP54-204ENST00000553923 Q9HAA7 133 aa1.86□□□□□ -2.11
SRP54-204ENST00000553923 ADAP2Q9NPF8 381 aa1.86□□□□□ -2.11
SRP54-204ENST00000553923 ABCB10Q9NRK6 738 aa1.86□□□□□ -2.11
SRP54-204ENST00000553923 SAMSN1Q9NSI8 373 aaKnown RBP1.86□□□□□ -2.11
SRP54-204ENST00000553923 MAN2C1Q9NTJ4 1040 aa1.86□□□□□ -2.11
SRP54-204ENST00000553923 CUTCQ9NTM9 273 aa1.86□□□□□ -2.11
SRP54-204ENST00000553923 SIGLEC8Q9NYZ4 499 aa1.86□□□□□ -2.11
SRP54-204ENST00000553923 MYEF2Q9P2K5 600 aaKnown RBP1.86□□□□□ -2.11
SRP54-204ENST00000553923 LNPEPQ9UIQ6 1025 aa1.86□□□□□ -2.11
SRP54-204ENST00000553923 ZNF221Q9UK13 617 aa1.86□□□□□ -2.11
SRP54-204ENST00000553923 TMCO1Q9UM00 188 aa1.86□□□□□ -2.11
SRP54-204ENST00000553923 DDX19BQ9UMR2 479 aa1.86□□□□□ -2.11
SRP54-204ENST00000553923 RASD1Q9Y272 281 aa1.86□□□□□ -2.11
SRP54-204ENST00000553923 MAP3K19Q56UN5 1328 aa1.86□□□□□ -2.11
SRP54-204ENST00000553923 A0A0A6YYD4 124 aa1.85□□□□□ -2.11
SRP54-204ENST00000553923 A0A0J9YYE9 177 aa1.85□□□□□ -2.11
SRP54-204ENST00000553923 TRBV11-1A0A0K0K1C0 115 aa1.85□□□□□ -2.11
SRP54-204ENST00000553923 A0A1B0GUH1 482 aa1.85□□□□□ -2.11
SRP54-204ENST00000553923 IQCMA0A1B0GVH7 501 aa1.85□□□□□ -2.11
SRP54-204ENST00000553923 A0A1W2PNV4 684 aa1.85□□□□□ -2.11
SRP54-204ENST00000553923 VSTM2BA6NLU5 285 aa1.85□□□□□ -2.11
SRP54-204ENST00000553923 CCT8L1PA6NM43 557 aa1.85□□□□□ -2.11
SRP54-204ENST00000553923 ZNF724A8MTY0 619 aa1.85□□□□□ -2.11
SRP54-204ENST00000553923 A8MUA0 341 aa1.85□□□□□ -2.11
SRP54-204ENST00000553923 ARHGEF33A8MVX0 844 aa1.85□□□□□ -2.11
SRP54-204ENST00000553923 EPM2AB3EWF7 344 aa1.85□□□□□ -2.11
SRP54-204ENST00000553923 FBP2O00757 339 aa1.85□□□□□ -2.11
SRP54-204ENST00000553923 SCAMP2O15127 329 aaKnown RBP1.85□□□□□ -2.11
SRP54-204ENST00000553923 POLR1CO15160 346 aaPredicted RBP1.85□□□□□ -2.11
SRP54-204ENST00000553923 SIVA1O15304 175 aa1.85□□□□□ -2.11
SRP54-204ENST00000553923 AIREO43918 545 aa1.85□□□□□ -2.11
SRP54-204ENST00000553923 HUS1O60921 280 aa1.85□□□□□ -2.11
SRP54-204ENST00000553923 KHDRBS3O75525 346 aaKnown RBP1.85□□□□□ -2.11
SRP54-204ENST00000553923 POP4O95707 220 aaKnown RBP1.85□□□□□ -2.11
SRP54-204ENST00000553923 CLDN1O95832 211 aa1.85□□□□□ -2.11
SRP54-204ENST00000553923 NUDT14O95848 222 aa1.85□□□□□ -2.11
SRP54-204ENST00000553923 IGKV3-15P01624 115 aa1.85□□□□□ -2.11
SRP54-204ENST00000553923 TRBC1P01850 177 aa1.85□□□□□ -2.11
SRP54-204ENST00000553923 MYL2P10916 166 aa1.85□□□□□ -2.11
SRP54-204ENST00000553923 HOXB8P17481 243 aaPredicted RBP1.85□□□□□ -2.11
SRP54-204ENST00000553923 SDC1P18827 310 aa1.85□□□□□ -2.11
SRP54-204ENST00000553923 KITLGP21583 273 aa1.85□□□□□ -2.11
SRP54-204ENST00000553923 BCKDHBP21953 392 aa1.85□□□□□ -2.11
SRP54-204ENST00000553923 UGT1A4P22310 534 aa1.85□□□□□ -2.11
SRP54-204ENST00000553923 FGF9P31371 208 aaPredicted RBP1.85□□□□□ -2.11
SRP54-204ENST00000553923 OTX1P32242 354 aaPredicted RBP1.85□□□□□ -2.11
SRP54-204ENST00000553923 MMP12P39900 470 aa1.85□□□□□ -2.11
SRP54-204ENST00000553923 TSFMP43897 325 aaKnown RBP1.85□□□□□ -2.11
SRP54-204ENST00000553923 QARSP47897 775 aaKnown RBP1.85□□□□□ -2.11
SRP54-204ENST00000553923 POU3F4P49335 361 aa1.85□□□□□ -2.11
SRP54-204ENST00000553923 STK19P49842 368 aaPredicted RBP1.85□□□□□ -2.11
SRP54-204ENST00000553923 HSPA2P54652 639 aa1.85□□□□□ -2.11
SRP54-204ENST00000553923 PKNOX1P55347 436 aa1.85□□□□□ -2.11
SRP54-204ENST00000553923 PAX9P55771 341 aa1.85□□□□□ -2.11
SRP54-204ENST00000553923 ST3GAL3Q11203 375 aa1.85□□□□□ -2.11
SRP54-204ENST00000553923 RAB40BQ12829 278 aa1.85□□□□□ -2.11
SRP54-204ENST00000553923 KLRB1Q12918 225 aa1.85□□□□□ -2.11
SRP54-204ENST00000553923 SELENBP1Q13228 472 aa1.85□□□□□ -2.11
SRP54-204ENST00000553923 SRSF9Q13242 221 aaKnown RBP eCLIP1.85□□□□□ -2.11
SRP54-204ENST00000553923 ITIH4Q14624 930 aa1.85□□□□□ -2.11
SRP54-204ENST00000553923 FASTKD3Q14CZ7 662 aaKnown RBP1.85□□□□□ -2.11
SRP54-204ENST00000553923 NECTIN1Q15223 517 aa1.85□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms