RNA–Protein interactions for RNA: ENST00000553868.1

SHMT2-208, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 941 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-208ENST00000553868 DLL4Q9NR61 685 aa13.1□□□□□ -0.31
SHMT2-208ENST00000553868 SACM1LQ9NTJ5 587 aa13.1□□□□□ -0.31
SHMT2-208ENST00000553868 TAS2R10Q9NYW0 307 aa13.1□□□□□ -0.31
SHMT2-208ENST00000553868 AKAP6Q13023 2319 aa13.1□□□□□ -0.31
SHMT2-208ENST00000553868 FBN1P35555 2871 aaKnown RBP13.09□□□□□ -0.31
SHMT2-208ENST00000553868 A0A087WUJ7 227 aa13.09□□□□□ -0.31
SHMT2-208ENST00000553868 DLGAP1O14490 977 aa13.09□□□□□ -0.31
SHMT2-208ENST00000553868 ADAM11O75078 769 aa13.09□□□□□ -0.31
SHMT2-208ENST00000553868 LYPD3O95274 346 aa13.09□□□□□ -0.31
SHMT2-208ENST00000553868 GASTP01350 101 aa13.09□□□□□ -0.31
SHMT2-208ENST00000553868 THY1P04216 161 aa13.09□□□□□ -0.31
SHMT2-208ENST00000553868 PTGDSP41222 190 aa13.09□□□□□ -0.31
SHMT2-208ENST00000553868 MASP1P48740 699 aa13.09□□□□□ -0.31
SHMT2-208ENST00000553868 ZNF41P51814 821 aaPredicted RBP13.09□□□□□ -0.31
SHMT2-208ENST00000553868 ESRRGP62508 458 aa13.09□□□□□ -0.31
SHMT2-208ENST00000553868 QPRTQ15274 297 aa13.09□□□□□ -0.31
SHMT2-208ENST00000553868 ZIK1Q3SY52 487 aaPredicted RBP13.09□□□□□ -0.31
SHMT2-208ENST00000553868 ZNF324BQ6AW86 544 aaPredicted RBP13.09□□□□□ -0.31
SHMT2-208ENST00000553868 XKRXQ6PP77 449 aa13.09□□□□□ -0.31
SHMT2-208ENST00000553868 ISLR2Q6UXK2 745 aa13.09□□□□□ -0.31
SHMT2-208ENST00000553868 CD300LDQ6UXZ3 194 aa13.09□□□□□ -0.31
SHMT2-208ENST00000553868 GALNT5Q7Z7M9 940 aa13.09□□□□□ -0.31
SHMT2-208ENST00000553868 OR4K17Q8NGC6 315 aa13.09□□□□□ -0.31
SHMT2-208ENST00000553868 GPR119Q8TDV5 335 aa13.09□□□□□ -0.31
SHMT2-208ENST00000553868 TMEM255BQ8WV15 326 aa13.09□□□□□ -0.31
SHMT2-208ENST00000553868 GTPBP3Q969Y2 492 aaKnown RBP13.09□□□□□ -0.31
SHMT2-208ENST00000553868 C3orf49Q96BT1 292 aa13.09□□□□□ -0.31
SHMT2-208ENST00000553868 FRMD6Q96NE9 622 aa13.09□□□□□ -0.31
SHMT2-208ENST00000553868 PRSS27Q9BQR3 290 aa13.09□□□□□ -0.31
SHMT2-208ENST00000553868 GABARAPL3Q9BY60 117 aa13.09□□□□□ -0.31
SHMT2-208ENST00000553868 RIBC2Q9H4K1 309 aa13.09□□□□□ -0.31
SHMT2-208ENST00000553868 SH2D2AQ9NP31 389 aa13.09□□□□□ -0.31
SHMT2-208ENST00000553868 ADAM10O14672 748 aa13.08□□□□□ -0.32
SHMT2-208ENST00000553868 CCL3P10147 92 aa13.08□□□□□ -0.32
SHMT2-208ENST00000553868 FUT4P22083 530 aa13.08□□□□□ -0.32
SHMT2-208ENST00000553868 CXCR1P25024 350 aa13.08□□□□□ -0.32
SHMT2-208ENST00000553868 FPR3P25089 353 aa13.08□□□□□ -0.32
SHMT2-208ENST00000553868 CA7P43166 264 aa13.08□□□□□ -0.32
SHMT2-208ENST00000553868 POLR2HP52434 150 aaKnown RBP13.08□□□□□ -0.32
SHMT2-208ENST00000553868 TPD52P55327 224 aaPredicted RBP13.08□□□□□ -0.32
SHMT2-208ENST00000553868 TSPAN31Q12999 210 aa13.08□□□□□ -0.32
SHMT2-208ENST00000553868 IL18R1Q13478 541 aa13.08□□□□□ -0.32
SHMT2-208ENST00000553868 SLC36A3Q495N2 470 aa13.08□□□□□ -0.32
SHMT2-208ENST00000553868 PRAMEF20Q5VT98 475 aa13.08□□□□□ -0.32
SHMT2-208ENST00000553868 MEX3BQ6ZN04 569 aaKnown RBP13.08□□□□□ -0.32
SHMT2-208ENST00000553868 CXXC5Q7LFL8 322 aaKnown RBP13.08□□□□□ -0.32
SHMT2-208ENST00000553868 GRINAQ7Z429 371 aa13.08□□□□□ -0.32
SHMT2-208ENST00000553868 ATG4DQ86TL0 474 aaPredicted RBP13.08□□□□□ -0.32
SHMT2-208ENST00000553868 PLCZ1Q86YW0 608 aa13.08□□□□□ -0.32
SHMT2-208ENST00000553868 NRMQ8IXM6 262 aa13.08□□□□□ -0.32
SHMT2-208ENST00000553868 SPATA3Q8NHX4 192 aa13.08□□□□□ -0.32
SHMT2-208ENST00000553868 TMEM41AQ96HV5 264 aa13.08□□□□□ -0.32
SHMT2-208ENST00000553868 MBOAT4Q96T53 435 aa13.08□□□□□ -0.32
SHMT2-208ENST00000553868 NIPSNAP1Q9BPW8 284 aa13.08□□□□□ -0.32
SHMT2-208ENST00000553868 SPOCK3Q9BQ16 436 aa13.08□□□□□ -0.32
SHMT2-208ENST00000553868 TMEM43Q9BTV4 400 aa13.08□□□□□ -0.32
SHMT2-208ENST00000553868 ZNF426Q9BUY5 554 aa13.08□□□□□ -0.32
SHMT2-208ENST00000553868 ANKRD60Q9BZ19 345 aa13.08□□□□□ -0.32
SHMT2-208ENST00000553868 ADAM19Q9H013 955 aa13.08□□□□□ -0.32
SHMT2-208ENST00000553868 FAM118AQ9NWS6 357 aa13.08□□□□□ -0.32
SHMT2-208ENST00000553868 LRFN1Q9P244 771 aa13.08□□□□□ -0.32
SHMT2-208ENST00000553868 A0A087WZY1 265 aa13.07□□□□□ -0.32
SHMT2-208ENST00000553868 SNPHO15079 494 aa13.07□□□□□ -0.32
SHMT2-208ENST00000553868 SLC16A6O15403 523 aa13.07□□□□□ -0.32
SHMT2-208ENST00000553868 GMFGO60234 142 aa13.07□□□□□ -0.32
SHMT2-208ENST00000553868 MITFO75030 526 aaPredicted RBP13.07□□□□□ -0.32
SHMT2-208ENST00000553868 IGF2P01344 180 aa13.07□□□□□ -0.32
SHMT2-208ENST00000553868 IFI30P13284 250 aa13.07□□□□□ -0.32
SHMT2-208ENST00000553868 OSMP13725 252 aa13.07□□□□□ -0.32
SHMT2-208ENST00000553868 POU2F1P14859 743 aa13.07□□□□□ -0.32
SHMT2-208ENST00000553868 TACR3P29371 465 aa13.07□□□□□ -0.32
SHMT2-208ENST00000553868 OMPP47874 163 aa13.07□□□□□ -0.32
SHMT2-208ENST00000553868 GSSP48637 474 aa13.07□□□□□ -0.32
SHMT2-208ENST00000553868 MAP2K6P52564 334 aa13.07□□□□□ -0.32
SHMT2-208ENST00000553868 CTBP2P56545 445 aa13.07□□□□□ -0.32
SHMT2-208ENST00000553868 ADARB1P78563 741 aaKnown RBP13.07□□□□□ -0.32
SHMT2-208ENST00000553868 ALDH6A1Q02252 535 aaKnown RBP13.07□□□□□ -0.32
SHMT2-208ENST00000553868 PRKCDQ05655 676 aa13.07□□□□□ -0.32
SHMT2-208ENST00000553868 NPRL3Q12980 569 aa13.07□□□□□ -0.32
SHMT2-208ENST00000553868 MFAP5Q13361 173 aa13.07□□□□□ -0.32
SHMT2-208ENST00000553868 ANKRD34AQ69YU3 496 aa13.07□□□□□ -0.32
SHMT2-208ENST00000553868 BICRALQ6AI39 1079 aa13.07□□□□□ -0.32
SHMT2-208ENST00000553868 KRT80Q6KB66 452 aa13.07□□□□□ -0.32
SHMT2-208ENST00000553868 C5orf46Q6UWT4 87 aa13.07□□□□□ -0.32
SHMT2-208ENST00000553868 LINC00114Q6XXX2 140 aa13.07□□□□□ -0.32
SHMT2-208ENST00000553868 NCCRP1Q6ZVX7 275 aaPredicted RBP13.07□□□□□ -0.32
SHMT2-208ENST00000553868 ZER1Q7Z7L7 766 aa13.07□□□□□ -0.32
SHMT2-208ENST00000553868 MARVELD2Q8N4S9 558 aa13.07□□□□□ -0.32
SHMT2-208ENST00000553868 PSD4Q8NDX1 1056 aa13.07□□□□□ -0.32
SHMT2-208ENST00000553868 SETD9Q8NE22 299 aa13.07□□□□□ -0.32
SHMT2-208ENST00000553868 OR2M3Q8NG83 312 aa13.07□□□□□ -0.32
SHMT2-208ENST00000553868 OR1J4Q8NGS1 313 aa13.07□□□□□ -0.32
SHMT2-208ENST00000553868 TAAR6Q96RI8 345 aa13.07□□□□□ -0.32
SHMT2-208ENST00000553868 APOL4Q9BPW4 351 aa13.07□□□□□ -0.32
SHMT2-208ENST00000553868 RNF32Q9H0A6 362 aa13.07□□□□□ -0.32
SHMT2-208ENST00000553868 CXXC4Q9H2H0 198 aa13.07□□□□□ -0.32
SHMT2-208ENST00000553868 DSN1Q9H410 356 aa13.07□□□□□ -0.32
SHMT2-208ENST00000553868 MED11Q9P086 117 aa13.07□□□□□ -0.32
SHMT2-208ENST00000553868 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.06□□□□□ -0.32
SHMT2-208ENST00000553868 LOC100130705A0A1B0GUX0 176 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms