RNA–Protein interactions for RNA: ENST00000553855.5

PSEN1-209, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,254 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-209ENST00000553855 TPD52P55327 224 aaPredicted RBP7.47□□□□□ -1.21
PSEN1-209ENST00000553855 RAC3P60763 192 aa7.47□□□□□ -1.21
PSEN1-209ENST00000553855 EPS8Q12929 822 aa7.47□□□□□ -1.21
PSEN1-209ENST00000553855 SYT14P1Q58G82 188 aa7.47□□□□□ -1.21
PSEN1-209ENST00000553855 HIST2H2BCQ6DN03 193 aa7.47□□□□□ -1.21
PSEN1-209ENST00000553855 WBP2NLQ6ICG8 309 aa7.47□□□□□ -1.21
PSEN1-209ENST00000553855 ERICH5Q6P6B1 374 aa7.47□□□□□ -1.21
PSEN1-209ENST00000553855 MYO7BQ6PIF6 2116 aa7.47□□□□□ -1.21
PSEN1-209ENST00000553855 SEZ6L2Q6UXD5 910 aa7.47□□□□□ -1.21
PSEN1-209ENST00000553855 ZNF836Q6ZNA1 936 aa7.47□□□□□ -1.21
PSEN1-209ENST00000553855 LUZP2Q86TE4 346 aa7.47□□□□□ -1.21
PSEN1-209ENST00000553855 SERPINA11Q86U17 422 aa7.47□□□□□ -1.21
PSEN1-209ENST00000553855 MTDHQ86UE4 582 aaKnown RBP7.47□□□□□ -1.21
PSEN1-209ENST00000553855 RANBP3LQ86VV4 465 aaPredicted RBP7.47□□□□□ -1.21
PSEN1-209ENST00000553855 MSRB3Q8IXL7 192 aa7.47□□□□□ -1.21
PSEN1-209ENST00000553855 NAXEQ8NCW5 288 aa7.47□□□□□ -1.21
PSEN1-209ENST00000553855 FAM71CQ8NEG0 241 aa7.47□□□□□ -1.21
PSEN1-209ENST00000553855 OR8J3Q8NGG0 315 aa7.47□□□□□ -1.21
PSEN1-209ENST00000553855 OR10A6Q8NH74 314 aa7.47□□□□□ -1.21
PSEN1-209ENST00000553855 SLC35B4Q969S0 331 aa7.47□□□□□ -1.21
PSEN1-209ENST00000553855 LRRC58Q96CX6 371 aa7.47□□□□□ -1.21
PSEN1-209ENST00000553855 COX4I2Q96KJ9 171 aa7.47□□□□□ -1.21
PSEN1-209ENST00000553855 ZNF559Q9BR84 538 aa7.47□□□□□ -1.21
PSEN1-209ENST00000553855 NAA11Q9BSU3 229 aaPredicted RBP7.47□□□□□ -1.21
PSEN1-209ENST00000553855 TAPBPLQ9BX59 468 aa7.47□□□□□ -1.21
PSEN1-209ENST00000553855 EFCAB1Q9HAE3 211 aa7.47□□□□□ -1.21
PSEN1-209ENST00000553855 TMEM27Q9HBJ8 222 aa7.47□□□□□ -1.21
PSEN1-209ENST00000553855 SLC52A3Q9NQ40 469 aa7.47□□□□□ -1.21
PSEN1-209ENST00000553855 CTPS2Q9NRF8 586 aa7.47□□□□□ -1.21
PSEN1-209ENST00000553855 ARMCX1Q9P291 453 aa7.47□□□□□ -1.21
PSEN1-209ENST00000553855 KLHL9Q9P2J3 617 aa7.47□□□□□ -1.21
PSEN1-209ENST00000553855 NDRG3Q9UGV2 375 aa7.47□□□□□ -1.21
PSEN1-209ENST00000553855 HDGFL3Q9Y3E1 203 aa7.47□□□□□ -1.21
PSEN1-209ENST00000553855 ZNF407Q9C0G0 2248 aa7.47□□□□□ -1.21
PSEN1-209ENST00000553855 PTPN13Q12923 2485 aa7.46□□□□□ -1.21
PSEN1-209ENST00000553855 GTF3C1Q12789 2109 aa7.46□□□□□ -1.21
PSEN1-209ENST00000553855 TMED7-TICAM2A0A0A6YYA0 188 aa7.46□□□□□ -1.22
PSEN1-209ENST00000553855 TUBAL3A6NHL2 446 aa7.46□□□□□ -1.22
PSEN1-209ENST00000553855 KDM4EB2RXH2 506 aaPredicted RBP7.46□□□□□ -1.22
PSEN1-209ENST00000553855 ETV2O00321 342 aaPredicted RBP7.46□□□□□ -1.22
PSEN1-209ENST00000553855 SYT5O00445 386 aa7.46□□□□□ -1.22
PSEN1-209ENST00000553855 AIM2O14862 343 aa7.46□□□□□ -1.22
PSEN1-209ENST00000553855 GSTA4O15217 222 aa7.46□□□□□ -1.22
PSEN1-209ENST00000553855 ZNF208O43345 1280 aa7.46□□□□□ -1.22
PSEN1-209ENST00000553855 DNPH1O43598 174 aa7.46□□□□□ -1.22
PSEN1-209ENST00000553855 EIF1BO60739 113 aaKnown RBP7.46□□□□□ -1.22
PSEN1-209ENST00000553855 GMNNO75496 209 aa7.46□□□□□ -1.22
PSEN1-209ENST00000553855 GKN3PP0CG01 181 aa7.46□□□□□ -1.22
PSEN1-209ENST00000553855 COX4I1P13073 169 aa7.46□□□□□ -1.22
PSEN1-209ENST00000553855 HOXB9P17482 250 aaPredicted RBP7.46□□□□□ -1.22
PSEN1-209ENST00000553855 TACR3P29371 465 aa7.46□□□□□ -1.22
PSEN1-209ENST00000553855 SSTR2P30874 369 aa7.46□□□□□ -1.22
PSEN1-209ENST00000553855 IFNA8P32881 189 aa7.46□□□□□ -1.22
PSEN1-209ENST00000553855 CPOXP36551 454 aa7.46□□□□□ -1.22
PSEN1-209ENST00000553855 KIR2DL3P43628 341 aa7.46□□□□□ -1.22
PSEN1-209ENST00000553855 RGS8P57771 180 aaPredicted RBP7.46□□□□□ -1.22
PSEN1-209ENST00000553855 OR2B6P58173 313 aa7.46□□□□□ -1.22
PSEN1-209ENST00000553855 FOXF2Q12947 444 aa7.46□□□□□ -1.22
PSEN1-209ENST00000553855 ZNF239Q16600 458 aaKnown RBP7.46□□□□□ -1.22
PSEN1-209ENST00000553855 FBXL19-AS1Q494R0 122 aa7.46□□□□□ -1.22
PSEN1-209ENST00000553855 NANOGP8Q6NSW7 305 aa7.46□□□□□ -1.22
PSEN1-209ENST00000553855 DHRS4L2Q6PKH6 230 aa7.46□□□□□ -1.22
PSEN1-209ENST00000553855 TMPPEQ6ZT21 453 aa7.46□□□□□ -1.22
PSEN1-209ENST00000553855 FCRLAQ7L513 359 aa7.46□□□□□ -1.22
PSEN1-209ENST00000553855 FAM214BQ7L5A3 538 aa7.46□□□□□ -1.22
PSEN1-209ENST00000553855 LIX1LQ8IVB5 337 aa7.46□□□□□ -1.22
PSEN1-209ENST00000553855 CLIP4Q8N3C7 705 aa7.46□□□□□ -1.22
PSEN1-209ENST00000553855 RELL2Q8NC24 303 aaPredicted RBP7.46□□□□□ -1.22
PSEN1-209ENST00000553855 OR6K3Q8NGY3 331 aa7.46□□□□□ -1.22
PSEN1-209ENST00000553855 ROBO4Q8WZ75 1007 aa7.46□□□□□ -1.22
PSEN1-209ENST00000553855 RCN3Q96D15 328 aa7.46□□□□□ -1.22
PSEN1-209ENST00000553855 C1orf159Q96HA4 380 aa7.46□□□□□ -1.22
PSEN1-209ENST00000553855 ADGRG7Q96K78 797 aa7.46□□□□□ -1.22
PSEN1-209ENST00000553855 HOPXQ9BPY8 73 aaPredicted RBP7.46□□□□□ -1.22
PSEN1-209ENST00000553855 TRIM2Q9C040 744 aa7.46□□□□□ -1.22
PSEN1-209ENST00000553855 ENKD1Q9H0I2 346 aa7.46□□□□□ -1.22
PSEN1-209ENST00000553855 KAT8Q9H7Z6 458 aaKnown RBP7.46□□□□□ -1.22
PSEN1-209ENST00000553855 NANOGQ9H9S0 305 aa7.46□□□□□ -1.22
PSEN1-209ENST00000553855 RNF122Q9H9V4 155 aa7.46□□□□□ -1.22
PSEN1-209ENST00000553855 RLIMQ9NVW2 624 aa7.46□□□□□ -1.22
PSEN1-209ENST00000553855 EMC3Q9P0I2 261 aa7.46□□□□□ -1.22
PSEN1-209ENST00000553855 KCNN3Q9UGI6 736 aa7.46□□□□□ -1.22
PSEN1-209ENST00000553855 ARL2BPQ9Y2Y0 163 aa7.46□□□□□ -1.22
PSEN1-209ENST00000553855 TMED7Q9Y3B3 224 aa7.46□□□□□ -1.22
PSEN1-209ENST00000553855 DOPEY1Q5JWR5 2465 aa7.46□□□□□ -1.22
PSEN1-209ENST00000553855 DNAJC13O75165 2243 aa7.46□□□□□ -1.22
PSEN1-209ENST00000553855 DIDO1Q9BTC0 2240 aaKnown RBP7.46□□□□□ -1.22
PSEN1-209ENST00000553855 DOPEY2Q9Y3R5 2298 aa7.45□□□□□ -1.22
PSEN1-209ENST00000553855 A8MVM7 634 aa7.45□□□□□ -1.22
PSEN1-209ENST00000553855 C19orf84I3L1E1 186 aa7.45□□□□□ -1.22
PSEN1-209ENST00000553855 M0QX08 132 aa7.45□□□□□ -1.22
PSEN1-209ENST00000553855 FBP2O00757 339 aa7.45□□□□□ -1.22
PSEN1-209ENST00000553855 AP3D1O14617 1153 aa7.45□□□□□ -1.22
PSEN1-209ENST00000553855 GPR171O14626 319 aa7.45□□□□□ -1.22
PSEN1-209ENST00000553855 SNX3O60493 162 aa7.45□□□□□ -1.22
PSEN1-209ENST00000553855 SS18L1O75177 396 aaPredicted RBP7.45□□□□□ -1.22
PSEN1-209ENST00000553855 AQP8O94778 261 aa7.45□□□□□ -1.22
PSEN1-209ENST00000553855 AHSA1O95433 338 aa7.45□□□□□ -1.22
PSEN1-209ENST00000553855 NTN1O95631 604 aa7.45□□□□□ -1.22
PSEN1-209ENST00000553855 PMS2P2O95744 297 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms