RNA–Protein interactions for RNA: ENST00000553693.5

SCFD1-210, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-210ENST00000553693 NCR3LG1Q68D85 454 aa2.48□□□□□ -2.01
SCFD1-210ENST00000553693 CENPPQ6IPU0 288 aa2.48□□□□□ -2.01
SCFD1-210ENST00000553693 PRSS48Q7RTY5 328 aa2.48□□□□□ -2.01
SCFD1-210ENST00000553693 C16orf62Q7Z3J2 963 aa2.48□□□□□ -2.01
SCFD1-210ENST00000553693 NANOGNBQ7Z5D8 188 aa2.48□□□□□ -2.01
SCFD1-210ENST00000553693 CBWD2Q8IUF1 395 aa2.48□□□□□ -2.01
SCFD1-210ENST00000553693 CCDC36Q8IYA8 594 aa2.48□□□□□ -2.01
SCFD1-210ENST00000553693 OR52M1Q8NGK5 317 aa2.48□□□□□ -2.01
SCFD1-210ENST00000553693 FNDC8Q8TC99 324 aa2.48□□□□□ -2.01
SCFD1-210ENST00000553693 SLC39A3Q9BRY0 314 aa2.48□□□□□ -2.01
SCFD1-210ENST00000553693 APOOQ9BUR5 198 aa2.48□□□□□ -2.01
SCFD1-210ENST00000553693 ALG12Q9BV10 488 aa2.48□□□□□ -2.01
SCFD1-210ENST00000553693 CAPS2Q9BXY5 557 aa2.48□□□□□ -2.01
SCFD1-210ENST00000553693 CRNKL1Q9BZJ0 848 aaKnown RBP2.48□□□□□ -2.01
SCFD1-210ENST00000553693 LPAR2Q9HBW0 351 aa2.48□□□□□ -2.01
SCFD1-210ENST00000553693 NRN1Q9NPD7 142 aa2.48□□□□□ -2.01
SCFD1-210ENST00000553693 TRPV5Q9NQA5 729 aa2.48□□□□□ -2.01
SCFD1-210ENST00000553693 HYPKQ9NX55 129 aa2.48□□□□□ -2.01
SCFD1-210ENST00000553693 SLC2A6Q9UGQ3 507 aa2.48□□□□□ -2.01
SCFD1-210ENST00000553693 RAB26Q9ULW5 256 aa2.48□□□□□ -2.01
SCFD1-210ENST00000553693 DHRS7Q9Y394 339 aa2.48□□□□□ -2.01
SCFD1-210ENST00000553693 AP4B1Q9Y6B7 739 aa2.48□□□□□ -2.01
SCFD1-210ENST00000553693 NACAE9PAV3 2078 aa2.48□□□□□ -2.01
SCFD1-210ENST00000553693 MGAMO43451 1857 aa2.48□□□□□ -2.01
SCFD1-210ENST00000553693 CHD9Q3L8U1 2897 aa2.47□□□□□ -2.01
SCFD1-210ENST00000553693 CDH23Q9H251 3354 aa2.47□□□□□ -2.01
SCFD1-210ENST00000553693 ECM29Q5VYK3 1845 aa2.47□□□□□ -2.01
SCFD1-210ENST00000553693 E9PMD0 336 aa2.47□□□□□ -2.01
SCFD1-210ENST00000553693 SGK494L7N484 410 aa2.47□□□□□ -2.01
SCFD1-210ENST00000553693 CXCL11O14625 94 aa2.47□□□□□ -2.01
SCFD1-210ENST00000553693 ADAM12O43184 909 aa2.47□□□□□ -2.01
SCFD1-210ENST00000553693 SDC3O75056 442 aa2.47□□□□□ -2.01
SCFD1-210ENST00000553693 CIB2O75838 187 aa2.47□□□□□ -2.01
SCFD1-210ENST00000553693 STK17BO94768 372 aa2.47□□□□□ -2.01
SCFD1-210ENST00000553693 CLUP10909 449 aa2.47□□□□□ -2.01
SCFD1-210ENST00000553693 DBTP11182 482 aaKnown RBP2.47□□□□□ -2.01
SCFD1-210ENST00000553693 H2AFXP16104 143 aaPredicted RBP2.47□□□□□ -2.01
SCFD1-210ENST00000553693 CYP2B6P20813 491 aa2.47□□□□□ -2.01
SCFD1-210ENST00000553693 UGT1A3P35503 534 aa2.47□□□□□ -2.01
SCFD1-210ENST00000553693 TRIM23P36406 574 aa2.47□□□□□ -2.01
SCFD1-210ENST00000553693 GYG1P46976 350 aa2.47□□□□□ -2.01
SCFD1-210ENST00000553693 EMDP50402 254 aa2.47□□□□□ -2.01
SCFD1-210ENST00000553693 ARFIP1P53367 373 aa2.47□□□□□ -2.01
SCFD1-210ENST00000553693 FGL1Q08830 312 aa2.47□□□□□ -2.01
SCFD1-210ENST00000553693 TCP10Q12799 353 aa2.47□□□□□ -2.01
SCFD1-210ENST00000553693 IL24Q13007 206 aa2.47□□□□□ -2.01
SCFD1-210ENST00000553693 ORC2Q13416 577 aaPredicted RBP2.47□□□□□ -2.01
SCFD1-210ENST00000553693 GPM6BQ13491 265 aa2.47□□□□□ -2.01
SCFD1-210ENST00000553693 MESDQ14696 234 aa2.47□□□□□ -2.01
SCFD1-210ENST00000553693 IL17AQ16552 155 aa2.47□□□□□ -2.01
SCFD1-210ENST00000553693 MAJINQ3KP22 176 aa2.47□□□□□ -2.01
SCFD1-210ENST00000553693 CCDC14Q49A88 953 aa2.47□□□□□ -2.01
SCFD1-210ENST00000553693 ACSF3Q4G176 576 aaPredicted RBP2.47□□□□□ -2.01
SCFD1-210ENST00000553693 BOLA3Q53S33 107 aa2.47□□□□□ -2.01
SCFD1-210ENST00000553693 CCDC183Q5T5S1 534 aa2.47□□□□□ -2.01
SCFD1-210ENST00000553693 SLX4IPQ5VYV7 408 aa2.47□□□□□ -2.01
SCFD1-210ENST00000553693 TMEM225Q6GV28 225 aa2.47□□□□□ -2.01
SCFD1-210ENST00000553693 APOBEC3HQ6NTF7 200 aaKnown RBP2.47□□□□□ -2.01
SCFD1-210ENST00000553693 CES3Q6UWW8 571 aa2.47□□□□□ -2.01
SCFD1-210ENST00000553693 PAQR9Q6ZVX9 377 aa2.47□□□□□ -2.01
SCFD1-210ENST00000553693 SLC5A11Q8WWX8 675 aa2.47□□□□□ -2.01
SCFD1-210ENST00000553693 LHX4Q969G2 390 aa2.47□□□□□ -2.01
SCFD1-210ENST00000553693 MCHR2Q969V1 340 aa2.47□□□□□ -2.01
SCFD1-210ENST00000553693 DHTKD1Q96HY7 919 aaPredicted RBP2.47□□□□□ -2.01
SCFD1-210ENST00000553693 ACCSQ96QU6 501 aa2.47□□□□□ -2.01
SCFD1-210ENST00000553693 ZBTB18Q99592 522 aa2.47□□□□□ -2.01
SCFD1-210ENST00000553693 JPH2Q9BR39 696 aaPredicted RBP2.47□□□□□ -2.01
SCFD1-210ENST00000553693 GCOM2Q9BZD3 368 aaPredicted RBP2.47□□□□□ -2.01
SCFD1-210ENST00000553693 SLC25A39Q9BZJ4 359 aaPredicted RBP2.47□□□□□ -2.01
SCFD1-210ENST00000553693 DHX33Q9H6R0 707 aaKnown RBP2.47□□□□□ -2.01
SCFD1-210ENST00000553693 GORASP2Q9H8Y8 452 aa2.47□□□□□ -2.01
SCFD1-210ENST00000553693 DUS2Q9NX74 493 aaKnown RBP2.47□□□□□ -2.01
SCFD1-210ENST00000553693 DCAF16Q9NXF7 216 aa2.47□□□□□ -2.01
SCFD1-210ENST00000553693 CTNNA3Q9UI47 895 aa2.47□□□□□ -2.01
SCFD1-210ENST00000553693 MRPS33Q9Y291 106 aaKnown RBP2.47□□□□□ -2.01
SCFD1-210ENST00000553693 WDR45Q9Y484 360 aa2.47□□□□□ -2.01
SCFD1-210ENST00000553693 ARAP2Q8WZ64 1704 aa2.47□□□□□ -2.01
SCFD1-210ENST00000553693 SPEF2Q9C093 1822 aa2.47□□□□□ -2.01
SCFD1-210ENST00000553693 MAPK8IP3Q9UPT6 1336 aa2.46□□□□□ -2.02
SCFD1-210ENST00000553693 PPIAL4CA0A0B4J2A2 164 aa2.46□□□□□ -2.02
SCFD1-210ENST00000553693 HSFX4A0A1B0GTS1 333 aaPredicted RBP2.46□□□□□ -2.02
SCFD1-210ENST00000553693 HSFX3A0A1B0GWH4 333 aaPredicted RBP2.46□□□□□ -2.02
SCFD1-210ENST00000553693 LRIT2A6NDA9 550 aa2.46□□□□□ -2.02
SCFD1-210ENST00000553693 NPIPA2E9PIF3 369 aa2.46□□□□□ -2.02
SCFD1-210ENST00000553693 C11orf98E9PRG8 122 aa2.46□□□□□ -2.02
SCFD1-210ENST00000553693 H0Y8G0 127 aa2.46□□□□□ -2.02
SCFD1-210ENST00000553693 H3BMH7 237 aa2.46□□□□□ -2.02
SCFD1-210ENST00000553693 WWP2O00308 870 aa2.46□□□□□ -2.02
SCFD1-210ENST00000553693 CASKO14936 926 aa2.46□□□□□ -2.02
SCFD1-210ENST00000553693 XPO1O14980 1071 aaKnown RBP2.46□□□□□ -2.02
SCFD1-210ENST00000553693 ALOX15BO15296 676 aa2.46□□□□□ -2.02
SCFD1-210ENST00000553693 ZNF208O43345 1280 aa2.46□□□□□ -2.02
SCFD1-210ENST00000553693 LANCL1O43813 399 aa2.46□□□□□ -2.02
SCFD1-210ENST00000553693 BCAS1O75363 584 aaPredicted RBP2.46□□□□□ -2.02
SCFD1-210ENST00000553693 WBP4O75554 376 aaKnown RBP2.46□□□□□ -2.02
SCFD1-210ENST00000553693 ADCY5O95622 1261 aa2.46□□□□□ -2.02
SCFD1-210ENST00000553693 PGK1P00558 417 aa2.46□□□□□ -2.02
SCFD1-210ENST00000553693 HOXB7P09629 217 aa2.46□□□□□ -2.02
SCFD1-210ENST00000553693 ZCCHC18P0CG32 403 aa2.46□□□□□ -2.02
SCFD1-210ENST00000553693 PPIAL4GP0DN37 164 aa2.46□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms