RNA–Protein interactions for RNA: ENST00000553683.1

VRK1-202, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 247 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-202ENST00000553683 TPGS2Q68CL5 300 aa1.89□□□□□ -2.11
VRK1-202ENST00000553683 ACP7Q6ZNF0 438 aa1.89□□□□□ -2.11
VRK1-202ENST00000553683 RUFY3Q7L099 469 aa1.89□□□□□ -2.11
VRK1-202ENST00000553683 TPRA1Q86W33 373 aa1.89□□□□□ -2.11
VRK1-202ENST00000553683 CCDC65Q8IXS2 484 aa1.89□□□□□ -2.11
VRK1-202ENST00000553683 TBC1D21Q8IYX1 336 aa1.89□□□□□ -2.11
VRK1-202ENST00000553683 ZNF619Q8N2I2 560 aa1.89□□□□□ -2.11
VRK1-202ENST00000553683 ZNF561Q8N587 486 aa1.89□□□□□ -2.11
VRK1-202ENST00000553683 LINC00469Q8N7U9 141 aa1.89□□□□□ -2.11
VRK1-202ENST00000553683 DUSP18Q8NEJ0 188 aa1.89□□□□□ -2.11
VRK1-202ENST00000553683 CCDC148Q8NFR7 591 aa1.89□□□□□ -2.11
VRK1-202ENST00000553683 OR10G3Q8NGC4 313 aa1.89□□□□□ -2.11
VRK1-202ENST00000553683 KIR2DL5BQ8NHK3 375 aa1.89□□□□□ -2.11
VRK1-202ENST00000553683 RPL3LQ92901 407 aaKnown RBP1.89□□□□□ -2.11
VRK1-202ENST00000553683 CNDP1Q96KN2 507 aa1.89□□□□□ -2.11
VRK1-202ENST00000553683 GAL3ST1Q99999 423 aa1.89□□□□□ -2.11
VRK1-202ENST00000553683 PELOQ9BRX2 385 aaKnown RBP1.89□□□□□ -2.11
VRK1-202ENST00000553683 GPR61Q9BZJ8 451 aa1.89□□□□□ -2.11
VRK1-202ENST00000553683 NTN4Q9HB63 628 aa1.89□□□□□ -2.11
VRK1-202ENST00000553683 ZNHIT6Q9NWK9 470 aaKnown RBP1.89□□□□□ -2.11
VRK1-202ENST00000553683 NINJ2Q9NZG7 142 aa1.89□□□□□ -2.11
VRK1-202ENST00000553683 STOX2Q9P2F5 926 aaPredicted RBP1.89□□□□□ -2.11
VRK1-202ENST00000553683 ZNF223Q9UK11 482 aaPredicted RBP1.89□□□□□ -2.11
VRK1-202ENST00000553683 TBX21Q9UL17 535 aa1.89□□□□□ -2.11
VRK1-202ENST00000553683 CHMP2BQ9UQN3 213 aa1.89□□□□□ -2.11
VRK1-202ENST00000553683 GSTK1Q9Y2Q3 226 aa1.89□□□□□ -2.11
VRK1-202ENST00000553683 V9GYY5 206 aaPredicted RBP1.89□□□□□ -2.11
VRK1-202ENST00000553683 SLIT3O75094 1523 aa1.89□□□□□ -2.11
VRK1-202ENST00000553683 A0A096LNJ9 63 aa1.88□□□□□ -2.11
VRK1-202ENST00000553683 A0A1B0GUL7 405 aa1.88□□□□□ -2.11
VRK1-202ENST00000553683 ERVV-1B6SEH8 477 aa1.88□□□□□ -2.11
VRK1-202ENST00000553683 F8WDY8 70 aa1.88□□□□□ -2.11
VRK1-202ENST00000553683 CHADO15335 359 aa1.88□□□□□ -2.11
VRK1-202ENST00000553683 AIREO43918 545 aa1.88□□□□□ -2.11
VRK1-202ENST00000553683 SNX4O95219 450 aa1.88□□□□□ -2.11
VRK1-202ENST00000553683 SMC2O95347 1197 aa1.88□□□□□ -2.11
VRK1-202ENST00000553683 STAMBPO95630 424 aa1.88□□□□□ -2.11
VRK1-202ENST00000553683 GUCA1CO95843 209 aa1.88□□□□□ -2.11
VRK1-202ENST00000553683 SLC25A27O95847 323 aa1.88□□□□□ -2.11
VRK1-202ENST00000553683 LGI1O95970 557 aa1.88□□□□□ -2.11
VRK1-202ENST00000553683 TDGF1P13385 188 aa1.88□□□□□ -2.11
VRK1-202ENST00000553683 ICAM2P13598 275 aa1.88□□□□□ -2.11
VRK1-202ENST00000553683 IGFBP3P17936 291 aaPredicted RBP1.88□□□□□ -2.11
VRK1-202ENST00000553683 PBLDP30039 288 aaPredicted RBP1.88□□□□□ -2.11
VRK1-202ENST00000553683 S100A5P33763 92 aa1.88□□□□□ -2.11
VRK1-202ENST00000553683 RFC4P35249 363 aa1.88□□□□□ -2.11
VRK1-202ENST00000553683 LONP1P36776 959 aaKnown RBP1.88□□□□□ -2.11
VRK1-202ENST00000553683 PMELP40967 661 aa1.88□□□□□ -2.11
VRK1-202ENST00000553683 ACADVLP49748 655 aa1.88□□□□□ -2.11
VRK1-202ENST00000553683 TDGF1P3P51864 188 aa1.88□□□□□ -2.11
VRK1-202ENST00000553683 ZNF136P52737 540 aa1.88□□□□□ -2.11
VRK1-202ENST00000553683 DLX1P56177 255 aa1.88□□□□□ -2.11
VRK1-202ENST00000553683 RWDD2BP57060 319 aa1.88□□□□□ -2.11
VRK1-202ENST00000553683 ZNF763Q0D2J5 394 aa1.88□□□□□ -2.11
VRK1-202ENST00000553683 UNC119Q13432 240 aa1.88□□□□□ -2.11
VRK1-202ENST00000553683 SMUG1Q53HV7 270 aa1.88□□□□□ -2.11
VRK1-202ENST00000553683 HHATQ5VTY9 493 aa1.88□□□□□ -2.11
VRK1-202ENST00000553683 FAM71E1Q6IPT2 247 aa1.88□□□□□ -2.11
VRK1-202ENST00000553683 RAB12Q6IQ22 244 aa1.88□□□□□ -2.11
VRK1-202ENST00000553683 CNSTQ6PJW8 725 aa1.88□□□□□ -2.11
VRK1-202ENST00000553683 C6orf89Q6UWU4 347 aa1.88□□□□□ -2.11
VRK1-202ENST00000553683 RFLNAQ6ZTI6 216 aa1.88□□□□□ -2.11
VRK1-202ENST00000553683 CCDC80Q76M96 950 aa1.88□□□□□ -2.11
VRK1-202ENST00000553683 PPP1R42Q7Z4L9 355 aa1.88□□□□□ -2.11
VRK1-202ENST00000553683 CAMK2N1Q7Z7J9 78 aa1.88□□□□□ -2.11
VRK1-202ENST00000553683 DHRSXQ8N5I4 330 aa1.88□□□□□ -2.11
VRK1-202ENST00000553683 TPRX1Q8N7U7 411 aa1.88□□□□□ -2.11
VRK1-202ENST00000553683 NPBQ8NG41 125 aa1.88□□□□□ -2.11
VRK1-202ENST00000553683 OR52K2Q8NGK3 314 aa1.88□□□□□ -2.11
VRK1-202ENST00000553683 OR56B4Q8NH76 319 aa1.88□□□□□ -2.11
VRK1-202ENST00000553683 ANKRD7Q92527 254 aa1.88□□□□□ -2.11
VRK1-202ENST00000553683 LRRC45Q96CN5 670 aa1.88□□□□□ -2.11
VRK1-202ENST00000553683 TMEM237Q96Q45 408 aa1.88□□□□□ -2.11
VRK1-202ENST00000553683 KCNA7Q96RP8 456 aa1.88□□□□□ -2.11
VRK1-202ENST00000553683 SH3GL1Q99961 368 aa1.88□□□□□ -2.11
VRK1-202ENST00000553683 ZNF670Q9BS34 389 aa1.88□□□□□ -2.11
VRK1-202ENST00000553683 RHOJQ9H4E5 214 aa1.88□□□□□ -2.11
VRK1-202ENST00000553683 VCPKMTQ9H867 229 aa1.88□□□□□ -2.11
VRK1-202ENST00000553683 WDR76Q9H967 626 aa1.88□□□□□ -2.11
VRK1-202ENST00000553683 CALHM2Q9HA72 323 aa1.88□□□□□ -2.11
VRK1-202ENST00000553683 NGBQ9NPG2 151 aa1.88□□□□□ -2.11
VRK1-202ENST00000553683 LHX9Q9NQ69 397 aa1.88□□□□□ -2.11
VRK1-202ENST00000553683 HPF1Q9NWY4 346 aa1.88□□□□□ -2.11
VRK1-202ENST00000553683 SMPD3Q9NY59 655 aaPredicted RBP1.88□□□□□ -2.11
VRK1-202ENST00000553683 RBAKQ9NYW8 714 aaPredicted RBP1.88□□□□□ -2.11
VRK1-202ENST00000553683 IL20Q9NYY1 176 aa1.88□□□□□ -2.11
VRK1-202ENST00000553683 TREM2Q9NZC2 230 aa1.88□□□□□ -2.11
VRK1-202ENST00000553683 PHF11Q9UIL8 331 aa1.88□□□□□ -2.11
VRK1-202ENST00000553683 RASD1Q9Y272 281 aa1.88□□□□□ -2.11
VRK1-202ENST00000553683 FRMPD3Q5JV73 1810 aa1.88□□□□□ -2.11
VRK1-202ENST00000553683 AKNAQ7Z591 1439 aa1.88□□□□□ -2.11
VRK1-202ENST00000553683 ATAD2BQ9ULI0 1458 aa1.88□□□□□ -2.11
VRK1-202ENST00000553683 IGHV1OR21-1A0A087WYE8 117 aa1.87□□□□□ -2.11
VRK1-202ENST00000553683 A0A1W2PQ67 120 aa1.87□□□□□ -2.11
VRK1-202ENST00000553683 TMX2-CTNND1H3BSU7 103 aa1.87□□□□□ -2.11
VRK1-202ENST00000553683 LAD1O00515 517 aa1.87□□□□□ -2.11
VRK1-202ENST00000553683 POLR3GO15318 223 aaPredicted RBP1.87□□□□□ -2.11
VRK1-202ENST00000553683 PALMO75781 387 aa1.87□□□□□ -2.11
VRK1-202ENST00000553683 CHTF8P0CG12 524 aa1.87□□□□□ -2.11
VRK1-202ENST00000553683 ZNF823P16415 610 aa1.87□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms