RNA–Protein interactions for RNA: ENST00000553405.1

MTHFD1-204, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 833 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-204ENST00000553405 ZDHHC21Q8IVQ6 265 aa13.29□□□□□ -0.28
MTHFD1-204ENST00000553405 ELOA3Q8NG57 546 aa13.29□□□□□ -0.28
MTHFD1-204ENST00000553405 MBD3L2Q8NHZ7 208 aaPredicted RBP13.29□□□□□ -0.28
MTHFD1-204ENST00000553405 SLC7A13Q8TCU3 470 aa13.29□□□□□ -0.28
MTHFD1-204ENST00000553405 TMEM255BQ8WV15 326 aa13.29□□□□□ -0.28
MTHFD1-204ENST00000553405 OSTF1Q92882 214 aa13.29□□□□□ -0.28
MTHFD1-204ENST00000553405 TAAR8Q969N4 342 aa13.29□□□□□ -0.28
MTHFD1-204ENST00000553405 LRGUKQ96M69 825 aa13.29□□□□□ -0.28
MTHFD1-204ENST00000553405 OR5B2Q96R09 309 aa13.29□□□□□ -0.28
MTHFD1-204ENST00000553405 PIP5K1AQ99755 562 aa13.29□□□□□ -0.28
MTHFD1-204ENST00000553405 VKORC1Q9BQB6 163 aa13.29□□□□□ -0.28
MTHFD1-204ENST00000553405 ANKRD19PQ9H560 264 aa13.29□□□□□ -0.28
MTHFD1-204ENST00000553405 CALHM2Q9HA72 323 aa13.29□□□□□ -0.28
MTHFD1-204ENST00000553405 CCM2LQ9NUG4 571 aaPredicted RBP13.29□□□□□ -0.28
MTHFD1-204ENST00000553405 VNN3Q9NY84 501 aa13.29□□□□□ -0.28
MTHFD1-204ENST00000553405 ING1Q9UK53 422 aaPredicted RBP13.29□□□□□ -0.28
MTHFD1-204ENST00000553405 ZNF175Q9Y473 711 aa13.29□□□□□ -0.28
MTHFD1-204ENST00000553405 TRGV8A0A0C4DH27 118 aa13.28□□□□□ -0.28
MTHFD1-204ENST00000553405 SMAD9O15198 467 aaKnown RBP13.28□□□□□ -0.28
MTHFD1-204ENST00000553405 DNPH1O43598 174 aa13.28□□□□□ -0.28
MTHFD1-204ENST00000553405 AQP8O94778 261 aa13.28□□□□□ -0.28
MTHFD1-204ENST00000553405 BGLAPP02818 100 aa13.28□□□□□ -0.28
MTHFD1-204ENST00000553405 RAP2AP10114 183 aa13.28□□□□□ -0.28
MTHFD1-204ENST00000553405 PTNP21246 168 aa13.28□□□□□ -0.28
MTHFD1-204ENST00000553405 SLC7A1P30825 629 aa13.28□□□□□ -0.28
MTHFD1-204ENST00000553405 CEACAM8P31997 349 aaPredicted RBP13.28□□□□□ -0.28
MTHFD1-204ENST00000553405 RBM34P42696 430 aaKnown RBP13.28□□□□□ -0.28
MTHFD1-204ENST00000553405 EIF1AXP47813 144 aaKnown RBP13.28□□□□□ -0.28
MTHFD1-204ENST00000553405 ERFP50548 548 aa13.28□□□□□ -0.28
MTHFD1-204ENST00000553405 HMGA2P52926 109 aa13.28□□□□□ -0.28
MTHFD1-204ENST00000553405 CARD18P57730 90 aa13.28□□□□□ -0.28
MTHFD1-204ENST00000553405 ST3GAL3Q11203 375 aa13.28□□□□□ -0.28
MTHFD1-204ENST00000553405 C1orf146Q5VVC0 180 aa13.28□□□□□ -0.28
MTHFD1-204ENST00000553405 C9orf106Q8NAJ2 232 aa13.28□□□□□ -0.28
MTHFD1-204ENST00000553405 NAXEQ8NCW5 288 aa13.28□□□□□ -0.28
MTHFD1-204ENST00000553405 OR6S1Q8NH40 331 aa13.28□□□□□ -0.28
MTHFD1-204ENST00000553405 FNDC9Q8TBE3 224 aa13.28□□□□□ -0.28
MTHFD1-204ENST00000553405 DDIT4LQ96D03 193 aa13.28□□□□□ -0.28
MTHFD1-204ENST00000553405 DNAJA3Q96EY1 480 aa13.28□□□□□ -0.28
MTHFD1-204ENST00000553405 TTYH2Q9BSA4 534 aa13.28□□□□□ -0.28
MTHFD1-204ENST00000553405 SLC19A3Q9BZV2 496 aa13.28□□□□□ -0.28
MTHFD1-204ENST00000553405 DENND2DQ9H6A0 471 aaPredicted RBP13.28□□□□□ -0.28
MTHFD1-204ENST00000553405 STOML1Q9UBI4 398 aa13.28□□□□□ -0.28
MTHFD1-204ENST00000553405 DIDO1Q9BTC0 2240 aaKnown RBP13.27□□□□□ -0.28
MTHFD1-204ENST00000553405 TRAV36DV7A0A075B6V5 113 aa13.27□□□□□ -0.29
MTHFD1-204ENST00000553405 A0A087WUU8 490 aa13.27□□□□□ -0.29
MTHFD1-204ENST00000553405 TRBV4-1A0A0J9YWV2 114 aa13.27□□□□□ -0.29
MTHFD1-204ENST00000553405 RAMP1O60894 148 aa13.27□□□□□ -0.29
MTHFD1-204ENST00000553405 IGF2P01344 180 aa13.27□□□□□ -0.29
MTHFD1-204ENST00000553405 ITGA2P17301 1181 aa13.27□□□□□ -0.29
MTHFD1-204ENST00000553405 ENPP1P22413 925 aa13.27□□□□□ -0.29
MTHFD1-204ENST00000553405 IDUAP35475 653 aa13.27□□□□□ -0.29
MTHFD1-204ENST00000553405 TIMP3P35625 211 aa13.27□□□□□ -0.29
MTHFD1-204ENST00000553405 NUP107P57740 925 aa13.27□□□□□ -0.29
MTHFD1-204ENST00000553405 ADORA2A-AS1P86434 159 aa13.27□□□□□ -0.29
MTHFD1-204ENST00000553405 CHRNB3Q05901 458 aa13.27□□□□□ -0.29
MTHFD1-204ENST00000553405 TRAM2Q15035 370 aa13.27□□□□□ -0.29
MTHFD1-204ENST00000553405 PON3Q15166 354 aa13.27□□□□□ -0.29
MTHFD1-204ENST00000553405 SEC23BQ15437 767 aa13.27□□□□□ -0.29
MTHFD1-204ENST00000553405 FAM98BQ52LJ0 330 aaKnown RBP13.27□□□□□ -0.29
MTHFD1-204ENST00000553405 C4orf17Q53FE4 359 aa13.27□□□□□ -0.29
MTHFD1-204ENST00000553405 ABLIM2Q6H8Q1 611 aa13.27□□□□□ -0.29
MTHFD1-204ENST00000553405 C5orf46Q6UWT4 87 aa13.27□□□□□ -0.29
MTHFD1-204ENST00000553405 B3GNT6Q6ZMB0 384 aa13.27□□□□□ -0.29
MTHFD1-204ENST00000553405 SLC46A3Q7Z3Q1 461 aa13.27□□□□□ -0.29
MTHFD1-204ENST00000553405 SPATA24Q86W54 205 aa13.27□□□□□ -0.29
MTHFD1-204ENST00000553405 OR4C15Q8NGM1 316 aa13.27□□□□□ -0.29
MTHFD1-204ENST00000553405 PFN4Q8NHR9 129 aa13.27□□□□□ -0.29
MTHFD1-204ENST00000553405 MFSD8Q8NHS3 518 aa13.27□□□□□ -0.29
MTHFD1-204ENST00000553405 PRR7Q8TB68 274 aa13.27□□□□□ -0.29
MTHFD1-204ENST00000553405 RNF128Q8TEB7 428 aa13.27□□□□□ -0.29
MTHFD1-204ENST00000553405 TMEM239Q8WW34 195 aa13.27□□□□□ -0.29
MTHFD1-204ENST00000553405 WNT2BQ93097 391 aa13.27□□□□□ -0.29
MTHFD1-204ENST00000553405 MOGAT1Q96PD6 335 aa13.27□□□□□ -0.29
MTHFD1-204ENST00000553405 FNDC11Q9BVV2 318 aa13.27□□□□□ -0.29
MTHFD1-204ENST00000553405 CHID1Q9BWS9 393 aa13.27□□□□□ -0.29
MTHFD1-204ENST00000553405 RNF122Q9H9V4 155 aa13.27□□□□□ -0.29
MTHFD1-204ENST00000553405 C20orf141Q9NUB4 165 aa13.27□□□□□ -0.29
MTHFD1-204ENST00000553405 PAQR5Q9NXK6 330 aaPredicted RBP13.27□□□□□ -0.29
MTHFD1-204ENST00000553405 SH3BGRL2Q9UJC5 107 aa13.27□□□□□ -0.29
MTHFD1-204ENST00000553405 ERRFI1Q9UJM3 462 aaPredicted RBP13.27□□□□□ -0.29
MTHFD1-204ENST00000553405 LYVE1Q9Y5Y7 322 aa13.27□□□□□ -0.29
MTHFD1-204ENST00000553405 SLC22A20A6NK97 555 aa13.26□□□□□ -0.29
MTHFD1-204ENST00000553405 LRRN3E7EW58 273 aa13.26□□□□□ -0.29
MTHFD1-204ENST00000553405 J3QKU1 62 aa13.26□□□□□ -0.29
MTHFD1-204ENST00000553405 SULT2B1O00204 365 aa13.26□□□□□ -0.29
MTHFD1-204ENST00000553405 LRRTM2O43300 516 aa13.26□□□□□ -0.29
MTHFD1-204ENST00000553405 PIP5K1CO60331 668 aa13.26□□□□□ -0.29
MTHFD1-204ENST00000553405 FKBP6O75344 327 aa13.26□□□□□ -0.29
MTHFD1-204ENST00000553405 H1F0P07305 194 aaKnown RBP13.26□□□□□ -0.29
MTHFD1-204ENST00000553405 TFPIP10646 304 aa13.26□□□□□ -0.29
MTHFD1-204ENST00000553405 RPS3AP61247 264 aaKnown RBP13.26□□□□□ -0.29
MTHFD1-204ENST00000553405 FHL1Q13642 323 aa13.26□□□□□ -0.29
MTHFD1-204ENST00000553405 KPNB1Q14974 876 aaKnown RBP13.26□□□□□ -0.29
MTHFD1-204ENST00000553405 ZNF74Q16587 644 aa13.26□□□□□ -0.29
MTHFD1-204ENST00000553405 FAM69AQ5T7M9 428 aa13.26□□□□□ -0.29
MTHFD1-204ENST00000553405 PODNL1Q6PEZ8 512 aa13.26□□□□□ -0.29
MTHFD1-204ENST00000553405 TBPL2Q6SJ96 375 aa13.26□□□□□ -0.29
MTHFD1-204ENST00000553405 NHLRC1Q6VVB1 395 aa13.26□□□□□ -0.29
MTHFD1-204ENST00000553405 CYP4Z1Q86W10 505 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms