RNA–Protein interactions for RNA: ENST00000553324.5

SHMT2-204, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-204ENST00000553324 OR52E4Q8NGH9 312 aa13.62□□□□□ -0.23
SHMT2-204ENST00000553324 C10orf82Q8WW14 230 aa13.62□□□□□ -0.23
SHMT2-204ENST00000553324 SF3B5Q9BWJ5 86 aaKnown RBP13.62□□□□□ -0.23
SHMT2-204ENST00000553324 PIF1Q9H611 641 aa13.62□□□□□ -0.23
SHMT2-204ENST00000553324 TESQ9UGI8 421 aaKnown RBP13.62□□□□□ -0.23
SHMT2-204ENST00000553324 NOSIPQ9Y314 301 aaKnown RBP13.62□□□□□ -0.23
SHMT2-204ENST00000553324 MPDZO75970 2070 aa13.61□□□□□ -0.23
SHMT2-204ENST00000553324 ZC3H12DA2A288 527 aaKnown RBP13.61□□□□□ -0.23
SHMT2-204ENST00000553324 LIPT2A6NK58 231 aa13.61□□□□□ -0.23
SHMT2-204ENST00000553324 ELOA3DA6NLF2 546 aaPredicted RBP13.61□□□□□ -0.23
SHMT2-204ENST00000553324 ZNF716A6NP11 495 aa13.61□□□□□ -0.23
SHMT2-204ENST00000553324 OR2T1O43869 369 aa13.61□□□□□ -0.23
SHMT2-204ENST00000553324 TPST1O60507 370 aa13.61□□□□□ -0.23
SHMT2-204ENST00000553324 MRPL33O75394 65 aaKnown RBP13.61□□□□□ -0.23
SHMT2-204ENST00000553324 VAMP5O95183 116 aa13.61□□□□□ -0.23
SHMT2-204ENST00000553324 LGI1O95970 557 aa13.61□□□□□ -0.23
SHMT2-204ENST00000553324 IL32P24001 234 aa13.61□□□□□ -0.23
SHMT2-204ENST00000553324 DNAJA1P31689 397 aaKnown RBP13.61□□□□□ -0.23
SHMT2-204ENST00000553324 PCGF2P35227 344 aa13.61□□□□□ -0.23
SHMT2-204ENST00000553324 RGS8P57771 180 aaPredicted RBP13.61□□□□□ -0.23
SHMT2-204ENST00000553324 CEACAM7Q14002 265 aa13.61□□□□□ -0.23
SHMT2-204ENST00000553324 SELPLGQ14242 412 aa13.61□□□□□ -0.23
SHMT2-204ENST00000553324 VMACQ2NL98 169 aa13.61□□□□□ -0.23
SHMT2-204ENST00000553324 ELOA3BQ3SY89 546 aa13.61□□□□□ -0.23
SHMT2-204ENST00000553324 C1orf140Q5VVS0 124 aa13.61□□□□□ -0.23
SHMT2-204ENST00000553324 REP15Q6BDI9 236 aa13.61□□□□□ -0.23
SHMT2-204ENST00000553324 ERICH5Q6P6B1 374 aa13.61□□□□□ -0.23
SHMT2-204ENST00000553324 C6orf89Q6UWU4 347 aa13.61□□□□□ -0.23
SHMT2-204ENST00000553324 RANBP3LQ86VV4 465 aaPredicted RBP13.61□□□□□ -0.23
SHMT2-204ENST00000553324 SNX32Q86XE0 403 aa13.61□□□□□ -0.23
SHMT2-204ENST00000553324 CCDC103Q8IW40 242 aa13.61□□□□□ -0.23
SHMT2-204ENST00000553324 ELOA3Q8NG57 546 aa13.61□□□□□ -0.23
SHMT2-204ENST00000553324 SLC26A7Q8TE54 656 aa13.61□□□□□ -0.23
SHMT2-204ENST00000553324 HSD17B8Q92506 261 aa13.61□□□□□ -0.23
SHMT2-204ENST00000553324 KISS1RQ969F8 398 aaPredicted RBP13.61□□□□□ -0.23
SHMT2-204ENST00000553324 ZNF775Q96BV0 537 aaPredicted RBP13.61□□□□□ -0.23
SHMT2-204ENST00000553324 SLC47A1Q96FL8 570 aa13.61□□□□□ -0.23
SHMT2-204ENST00000553324 ZNF300Q96RE9 604 aaPredicted RBP13.61□□□□□ -0.23
SHMT2-204ENST00000553324 ACTR6Q9GZN1 396 aa13.61□□□□□ -0.23
SHMT2-204ENST00000553324 ZNF814B7Z6K7 855 aa13.6□□□□□ -0.23
SHMT2-204ENST00000553324 FRS3O43559 492 aa13.6□□□□□ -0.23
SHMT2-204ENST00000553324 FMO6PO60774 539 aa13.6□□□□□ -0.23
SHMT2-204ENST00000553324 NPIPB7O75200 414 aa13.6□□□□□ -0.23
SHMT2-204ENST00000553324 GCM2O75603 506 aaPredicted RBP13.6□□□□□ -0.23
SHMT2-204ENST00000553324 AHSA1O95433 338 aa13.6□□□□□ -0.23
SHMT2-204ENST00000553324 ADAP00813 363 aa13.6□□□□□ -0.23
SHMT2-204ENST00000553324 IFNA14P01570 189 aa13.6□□□□□ -0.23
SHMT2-204ENST00000553324 DNASE1P24855 282 aa13.6□□□□□ -0.23
SHMT2-204ENST00000553324 CCKARP32238 428 aa13.6□□□□□ -0.23
SHMT2-204ENST00000553324 HOXC5Q00444 222 aa13.6□□□□□ -0.23
SHMT2-204ENST00000553324 DMTNQ08495 405 aa13.6□□□□□ -0.23
SHMT2-204ENST00000553324 BNIP2Q12982 314 aa13.6□□□□□ -0.23
SHMT2-204ENST00000553324 VEZF1Q14119 521 aa13.6□□□□□ -0.23
SHMT2-204ENST00000553324 SLC17A1Q14916 467 aa13.6□□□□□ -0.23
SHMT2-204ENST00000553324 OR7A5Q15622 319 aa13.6□□□□□ -0.23
SHMT2-204ENST00000553324 ALG10BQ5I7T1 473 aa13.6□□□□□ -0.23
SHMT2-204ENST00000553324 OTUD3Q5T2D3 398 aaPredicted RBP13.6□□□□□ -0.23
SHMT2-204ENST00000553324 ANKRD34AQ69YU3 496 aa13.6□□□□□ -0.23
SHMT2-204ENST00000553324 TMEM225Q6GV28 225 aa13.6□□□□□ -0.23
SHMT2-204ENST00000553324 CCDC80Q76M96 950 aa13.6□□□□□ -0.23
SHMT2-204ENST00000553324 SPATA21Q7Z572 469 aa13.6□□□□□ -0.23
SHMT2-204ENST00000553324 CXorf67Q86X51 503 aaPredicted RBP13.6□□□□□ -0.23
SHMT2-204ENST00000553324 MFSD8Q8NHS3 518 aa13.6□□□□□ -0.23
SHMT2-204ENST00000553324 APH1AQ96BI3 265 aa13.6□□□□□ -0.23
SHMT2-204ENST00000553324 DNAJA3Q96EY1 480 aa13.6□□□□□ -0.23
SHMT2-204ENST00000553324 ZC3HAV1LQ96H79 300 aaKnown RBP13.6□□□□□ -0.23
SHMT2-204ENST00000553324 NSRP1Q9H0G5 558 aaKnown RBP13.6□□□□□ -0.23
SHMT2-204ENST00000553324 NGBQ9NPG2 151 aa13.6□□□□□ -0.23
SHMT2-204ENST00000553324 ITGB1BP2Q9UKP3 347 aa13.6□□□□□ -0.23
SHMT2-204ENST00000553324 SLC9A8Q9Y2E8 581 aa13.6□□□□□ -0.23
SHMT2-204ENST00000553324 PDZD2O15018 2839 aa13.59□□□□□ -0.23
SHMT2-204ENST00000553324 A0A1B0GWA3 101 aa13.59□□□□□ -0.23
SHMT2-204ENST00000553324 AQP7P3A6NL99 342 aa13.59□□□□□ -0.23
SHMT2-204ENST00000553324 TMEM229AB2RXF0 380 aa13.59□□□□□ -0.23
SHMT2-204ENST00000553324 KLK2P20151 261 aa13.59□□□□□ -0.23
SHMT2-204ENST00000553324 GZMMP51124 257 aa13.59□□□□□ -0.23
SHMT2-204ENST00000553324 NR1H2P55055 460 aa13.59□□□□□ -0.23
SHMT2-204ENST00000553324 MFSD13AQ14CX5 517 aa13.59□□□□□ -0.23
SHMT2-204ENST00000553324 DUSP7Q16829 419 aa13.59□□□□□ -0.23
SHMT2-204ENST00000553324 GLIPR1L2Q4G1C9 344 aa13.59□□□□□ -0.23
SHMT2-204ENST00000553324 BEX5Q5H9J7 111 aa13.59□□□□□ -0.23
SHMT2-204ENST00000553324 SWT1Q5T5J6 900 aaKnown RBP13.59□□□□□ -0.23
SHMT2-204ENST00000553324 FBXW9Q5XUX1 488 aa13.59□□□□□ -0.23
SHMT2-204ENST00000553324 ARPINQ7Z6K5 226 aa13.59□□□□□ -0.23
SHMT2-204ENST00000553324 CPLX4Q7Z7G2 160 aa13.59□□□□□ -0.23
SHMT2-204ENST00000553324 P2RY8Q86VZ1 359 aa13.59□□□□□ -0.23
SHMT2-204ENST00000553324 CALHM3Q86XJ0 350 aa13.59□□□□□ -0.23
SHMT2-204ENST00000553324 UBE2J2Q8N2K1 259 aa13.59□□□□□ -0.23
SHMT2-204ENST00000553324 SMYD1Q8NB12 490 aa13.59□□□□□ -0.23
SHMT2-204ENST00000553324 SLC38A4Q969I6 547 aa13.59□□□□□ -0.23
SHMT2-204ENST00000553324 EPYCQ99645 322 aa13.59□□□□□ -0.23
SHMT2-204ENST00000553324 HOPXQ9BPY8 73 aaPredicted RBP13.59□□□□□ -0.23
SHMT2-204ENST00000553324 ELAC2Q9BQ52 826 aaKnown RBP13.59□□□□□ -0.23
SHMT2-204ENST00000553324 RSPO3Q9BXY4 272 aaPredicted RBP13.59□□□□□ -0.23
SHMT2-204ENST00000553324 PLEKHF2Q9H8W4 249 aa13.59□□□□□ -0.23
SHMT2-204ENST00000553324 EFCAB1Q9HAE3 211 aa13.59□□□□□ -0.23
SHMT2-204ENST00000553324 C6orf203Q9P0P8 240 aaPredicted RBP13.59□□□□□ -0.23
SHMT2-204ENST00000553324 ARMCX1Q9P291 453 aa13.59□□□□□ -0.23
SHMT2-204ENST00000553324 ST6GALNAC2Q9UJ37 374 aa13.59□□□□□ -0.23
SHMT2-204ENST00000553324 RASD1Q9Y272 281 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms