RNA–Protein interactions for RNA: ENST00000553308.1

SYNE2-209, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 557 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-209ENST00000553308 LGI1O95970 557 aa7.88□□□□□ -1.15
SYNE2-209ENST00000553308 CRYAAP02489 173 aa7.88□□□□□ -1.15
SYNE2-209ENST00000553308 FAM153BP0C7A2 387 aa7.88□□□□□ -1.15
SYNE2-209ENST00000553308 CECR9P0C854 216 aa7.88□□□□□ -1.15
SYNE2-209ENST00000553308 OR12D1P0DN82 309 aa7.88□□□□□ -1.15
SYNE2-209ENST00000553308 CALCRP30988 508 aa7.88□□□□□ -1.15
SYNE2-209ENST00000553308 CRHR1P34998 444 aa7.88□□□□□ -1.15
SYNE2-209ENST00000553308 IDH2P48735 452 aaKnown RBP7.88□□□□□ -1.15
SYNE2-209ENST00000553308 CLK1P49759 484 aaKnown RBP7.88□□□□□ -1.15
SYNE2-209ENST00000553308 ACTG1P63261 375 aa7.88□□□□□ -1.15
SYNE2-209ENST00000553308 SLC35A1P78382 337 aa7.88□□□□□ -1.15
SYNE2-209ENST00000553308 WHAMMP3Q1A5X7 153 aa7.88□□□□□ -1.15
SYNE2-209ENST00000553308 FAM153CQ494X1 144 aa7.88□□□□□ -1.15
SYNE2-209ENST00000553308 ATP6AP1LQ52LC2 224 aa7.88□□□□□ -1.15
SYNE2-209ENST00000553308 OTUD3Q5T2D3 398 aaPredicted RBP7.88□□□□□ -1.15
SYNE2-209ENST00000553308 C1QTNF12Q5T7M4 302 aa7.88□□□□□ -1.15
SYNE2-209ENST00000553308 IL23RQ5VWK5 629 aa7.88□□□□□ -1.15
SYNE2-209ENST00000553308 TNFAIP8L2Q6P589 184 aaPredicted RBP7.88□□□□□ -1.15
SYNE2-209ENST00000553308 BHLHB9Q6PI77 547 aa7.88□□□□□ -1.15
SYNE2-209ENST00000553308 PAQR6Q6TCH4 344 aa7.88□□□□□ -1.15
SYNE2-209ENST00000553308 FRRS1Q6ZNA5 592 aa7.88□□□□□ -1.15
SYNE2-209ENST00000553308 AAED1Q7RTV5 226 aa7.88□□□□□ -1.15
SYNE2-209ENST00000553308 MYPOPQ86VE0 399 aaPredicted RBP7.88□□□□□ -1.15
SYNE2-209ENST00000553308 RIMKLAQ8IXN7 391 aa7.88□□□□□ -1.15
SYNE2-209ENST00000553308 SVOPLQ8N434 492 aa7.88□□□□□ -1.15
SYNE2-209ENST00000553308 ARFGAP2Q8N6H7 521 aa7.88□□□□□ -1.15
SYNE2-209ENST00000553308 NATD1Q8N6N6 113 aa7.88□□□□□ -1.15
SYNE2-209ENST00000553308 ZIC4Q8N9L1 334 aa7.88□□□□□ -1.15
SYNE2-209ENST00000553308 POMGNT2Q8NAT1 580 aa7.88□□□□□ -1.15
SYNE2-209ENST00000553308 OR1K1Q8NGR3 316 aa7.88□□□□□ -1.15
SYNE2-209ENST00000553308 RAB8BQ92930 207 aa7.88□□□□□ -1.15
SYNE2-209ENST00000553308 ZG16BQ96DA0 208 aa7.88□□□□□ -1.15
SYNE2-209ENST00000553308 AURKBQ96GD4 344 aaPredicted RBP7.88□□□□□ -1.15
SYNE2-209ENST00000553308 PPP3R2Q96LZ3 170 aa7.88□□□□□ -1.15
SYNE2-209ENST00000553308 C3orf30Q96M34 536 aa7.88□□□□□ -1.15
SYNE2-209ENST00000553308 ALKBH3Q96Q83 286 aaPredicted RBP7.88□□□□□ -1.15
SYNE2-209ENST00000553308 NAA11Q9BSU3 229 aaPredicted RBP7.88□□□□□ -1.15
SYNE2-209ENST00000553308 RAB1BQ9H0U4 201 aa7.88□□□□□ -1.15
SYNE2-209ENST00000553308 METTL17Q9H7H0 456 aaPredicted RBP7.88□□□□□ -1.15
SYNE2-209ENST00000553308 OBP2BQ9NPH6 170 aa7.88□□□□□ -1.15
SYNE2-209ENST00000553308 METRNQ9UJH8 293 aa7.88□□□□□ -1.15
SYNE2-209ENST00000553308 OSGIN1Q9UJX0 560 aa7.88□□□□□ -1.15
SYNE2-209ENST00000553308 PCDHGB4Q9UN71 923 aa7.88□□□□□ -1.15
SYNE2-209ENST00000553308 TMED7Q9Y3B3 224 aa7.88□□□□□ -1.15
SYNE2-209ENST00000553308 WDR45Q9Y484 360 aa7.88□□□□□ -1.15
SYNE2-209ENST00000553308 A0A096LPE4 126 aa7.87□□□□□ -1.15
SYNE2-209ENST00000553308 A0A1W2PPZ6 126 aa7.87□□□□□ -1.15
SYNE2-209ENST00000553308 LYNX1G3V0Z9 82 aa7.87□□□□□ -1.15
SYNE2-209ENST00000553308 NR5A2O00482 541 aa7.87□□□□□ -1.15
SYNE2-209ENST00000553308 COPEO14579 308 aa7.87□□□□□ -1.15
SYNE2-209ENST00000553308 TRIM13O60858 407 aa7.87□□□□□ -1.15
SYNE2-209ENST00000553308 LYPLA1O75608 230 aaPredicted RBP7.87□□□□□ -1.15
SYNE2-209ENST00000553308 AKR7A3O95154 331 aa7.87□□□□□ -1.15
SYNE2-209ENST00000553308 FGF4P08620 206 aa7.87□□□□□ -1.15
SYNE2-209ENST00000553308 IGFBP1P08833 259 aaPredicted RBP7.87□□□□□ -1.15
SYNE2-209ENST00000553308 CELA3BP08861 270 aa7.87□□□□□ -1.15
SYNE2-209ENST00000553308 LYNX1P0DP58 116 aa7.87□□□□□ -1.15
SYNE2-209ENST00000553308 PRPS1L1P21108 318 aa7.87□□□□□ -1.15
SYNE2-209ENST00000553308 FKBP2P26885 142 aaKnown RBP7.87□□□□□ -1.15
SYNE2-209ENST00000553308 TACR3P29371 465 aa7.87□□□□□ -1.15
SYNE2-209ENST00000553308 SLC1A3P43003 542 aa7.87□□□□□ -1.15
SYNE2-209ENST00000553308 CCT5P48643 541 aa7.87□□□□□ -1.15
SYNE2-209ENST00000553308 POLR2HP52434 150 aaKnown RBP7.87□□□□□ -1.15
SYNE2-209ENST00000553308 DVL1P1P54792 670 aaPredicted RBP7.87□□□□□ -1.15
SYNE2-209ENST00000553308 UBE2NP61088 152 aaKnown RBP7.87□□□□□ -1.15
SYNE2-209ENST00000553308 KCNJ10P78508 379 aa7.87□□□□□ -1.15
SYNE2-209ENST00000553308 HGFACQ04756 655 aa7.87□□□□□ -1.15
SYNE2-209ENST00000553308 RIN1Q13671 783 aa7.87□□□□□ -1.15
SYNE2-209ENST00000553308 PGS1Q32NB8 556 aa7.87□□□□□ -1.15
SYNE2-209ENST00000553308 C6orf136Q5SQH8 315 aa7.87□□□□□ -1.15
SYNE2-209ENST00000553308 OR4F3Q6IEY1 312 aa7.87□□□□□ -1.15
SYNE2-209ENST00000553308 ANKRD16Q6P6B7 361 aa7.87□□□□□ -1.15
SYNE2-209ENST00000553308 LINGO2Q7L985 606 aa7.87□□□□□ -1.15
SYNE2-209ENST00000553308 CDK20Q8IZL9 346 aa7.87□□□□□ -1.15
SYNE2-209ENST00000553308 C4orf33Q8N1A6 199 aa7.87□□□□□ -1.15
SYNE2-209ENST00000553308 ZNF786Q8N393 782 aa7.87□□□□□ -1.15
SYNE2-209ENST00000553308 TMEM99Q8N816 258 aa7.87□□□□□ -1.15
SYNE2-209ENST00000553308 FNDC5Q8NAU1 212 aa7.87□□□□□ -1.15
SYNE2-209ENST00000553308 OR9K2Q8NGE7 335 aa7.87□□□□□ -1.15
SYNE2-209ENST00000553308 MIPOL1Q8TD10 442 aa7.87□□□□□ -1.15
SYNE2-209ENST00000553308 ZFAND2BQ8WV99 257 aa7.87□□□□□ -1.15
SYNE2-209ENST00000553308 XAGE5Q8WWM1 108 aa7.87□□□□□ -1.15
SYNE2-209ENST00000553308 NEU4Q8WWR8 484 aaPredicted RBP7.87□□□□□ -1.15
SYNE2-209ENST00000553308 CNOT9Q92600 299 aaKnown RBP7.87□□□□□ -1.15
SYNE2-209ENST00000553308 ROPN1LQ96C74 230 aa7.87□□□□□ -1.15
SYNE2-209ENST00000553308 DDIT4LQ96D03 193 aa7.87□□□□□ -1.15
SYNE2-209ENST00000553308 BOD1Q96IK1 185 aa7.87□□□□□ -1.15
SYNE2-209ENST00000553308 PRPF18Q99633 342 aaKnown RBP7.87□□□□□ -1.15
SYNE2-209ENST00000553308 TXLNGYQ9BZA5 131 aa7.87□□□□□ -1.15
SYNE2-209ENST00000553308 NELFAQ9H3P2 528 aa7.87□□□□□ -1.15
SYNE2-209ENST00000553308 EXOSC3Q9NQT5 275 aaKnown RBP7.87□□□□□ -1.15
SYNE2-209ENST00000553308 EXD2Q9NVH0 621 aa7.87□□□□□ -1.15
SYNE2-209ENST00000553308 TMEM45AQ9NWC5 275 aa7.87□□□□□ -1.15
SYNE2-209ENST00000553308 CRNNQ9UBG3 495 aaPredicted RBP7.87□□□□□ -1.15
SYNE2-209ENST00000553308 ARPC4-TTLL3A0A0A6YYG9 625 aa7.86□□□□□ -1.15
SYNE2-209ENST00000553308 A0A0A6YYJ9 748 aa7.86□□□□□ -1.15
SYNE2-209ENST00000553308 TMEM129A0AVI4 362 aa7.86□□□□□ -1.15
SYNE2-209ENST00000553308 SH3PXD2BA1X283 911 aa7.86□□□□□ -1.15
SYNE2-209ENST00000553308 PRAMEF27A3QJZ7 478 aa7.86□□□□□ -1.15
SYNE2-209ENST00000553308 LIPT2A6NK58 231 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms