RNA–Protein interactions for RNA: ENST00000552839.6

TMEM116-218, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 511 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-218ENST00000552839 KIAA1549Q9HCM3 1950 aa10.23□□□□□ -0.77
TMEM116-218ENST00000552839 FBN3Q75N90 2809 aa10.23□□□□□ -0.77
TMEM116-218ENST00000552839 TNFSF12-TNFSF13A0A0A6YY99 330 aa10.23□□□□□ -0.77
TMEM116-218ENST00000552839 OR2M5A3KFT3 312 aa10.23□□□□□ -0.77
TMEM116-218ENST00000552839 hCG_2039718K7EN88 272 aa10.23□□□□□ -0.77
TMEM116-218ENST00000552839 FAAHO00519 579 aa10.23□□□□□ -0.77
TMEM116-218ENST00000552839 GNGT2O14610 69 aa10.23□□□□□ -0.77
TMEM116-218ENST00000552839 RRP9O43818 475 aaKnown RBP10.23□□□□□ -0.77
TMEM116-218ENST00000552839 SUSD5O60279 629 aa10.23□□□□□ -0.77
TMEM116-218ENST00000552839 FMO6PO60774 539 aa10.23□□□□□ -0.77
TMEM116-218ENST00000552839 ACTL6AO96019 429 aa10.23□□□□□ -0.77
TMEM116-218ENST00000552839 GPIP06744 558 aa10.23□□□□□ -0.77
TMEM116-218ENST00000552839 PNMTP11086 282 aa10.23□□□□□ -0.77
TMEM116-218ENST00000552839 PRG2P13727 222 aa10.23□□□□□ -0.77
TMEM116-218ENST00000552839 TACR3P29371 465 aa10.23□□□□□ -0.77
TMEM116-218ENST00000552839 SFTPDP35247 375 aa10.23□□□□□ -0.77
TMEM116-218ENST00000552839 PEX19P40855 299 aa10.23□□□□□ -0.77
TMEM116-218ENST00000552839 APOBEC1P41238 236 aaKnown RBP10.23□□□□□ -0.77
TMEM116-218ENST00000552839 RPS3AP61247 264 aaKnown RBP10.23□□□□□ -0.77
TMEM116-218ENST00000552839 MS4A2Q01362 244 aa10.23□□□□□ -0.77
TMEM116-218ENST00000552839 SPIBQ01892 262 aa10.23□□□□□ -0.77
TMEM116-218ENST00000552839 SRYQ05066 204 aa10.23□□□□□ -0.77
TMEM116-218ENST00000552839 KEAP1Q14145 624 aa10.23□□□□□ -0.77
TMEM116-218ENST00000552839 DAZAP2Q15038 168 aaPredicted RBP10.23□□□□□ -0.77
TMEM116-218ENST00000552839 OR1Q1Q15612 314 aa10.23□□□□□ -0.77
TMEM116-218ENST00000552839 TOMM34Q15785 309 aaPredicted RBP10.23□□□□□ -0.77
TMEM116-218ENST00000552839 FXNQ16595 210 aa10.23□□□□□ -0.77
TMEM116-218ENST00000552839 ENTPD8Q5MY95 495 aa10.23□□□□□ -0.77
TMEM116-218ENST00000552839 WLSQ5T9L3 541 aa10.23□□□□□ -0.77
TMEM116-218ENST00000552839 RIPPLY2Q5TAB7 128 aa10.23□□□□□ -0.77
TMEM116-218ENST00000552839 PGM2L1Q6PCE3 622 aa10.23□□□□□ -0.77
TMEM116-218ENST00000552839 ZDHHC21Q8IVQ6 265 aa10.23□□□□□ -0.77
TMEM116-218ENST00000552839 GTPBP8Q8N3Z3 284 aaPredicted RBP10.23□□□□□ -0.77
TMEM116-218ENST00000552839 NEIL3Q8TAT5 605 aa10.23□□□□□ -0.77
TMEM116-218ENST00000552839 FAM222BQ8WU58 562 aa10.23□□□□□ -0.77
TMEM116-218ENST00000552839 SLC25A43Q8WUT9 341 aaPredicted RBP10.23□□□□□ -0.77
TMEM116-218ENST00000552839 DDIT4LQ96D03 193 aa10.23□□□□□ -0.77
TMEM116-218ENST00000552839 PRRC1Q96M27 445 aa10.23□□□□□ -0.77
TMEM116-218ENST00000552839 POLR2J2Q9GZM3 115 aaKnown RBP10.23□□□□□ -0.77
TMEM116-218ENST00000552839 POLR2J3Q9H1A7 115 aaKnown RBP10.23□□□□□ -0.77
TMEM116-218ENST00000552839 ACKR4Q9NPB9 350 aa10.23□□□□□ -0.77
TMEM116-218ENST00000552839 ACER3Q9NUN7 267 aa10.23□□□□□ -0.77
TMEM116-218ENST00000552839 C6orf203Q9P0P8 240 aaPredicted RBP10.23□□□□□ -0.77
TMEM116-218ENST00000552839 CHRNA9Q9UGM1 479 aa10.23□□□□□ -0.77
TMEM116-218ENST00000552839 PRDM4Q9UKN5 801 aa10.23□□□□□ -0.77
TMEM116-218ENST00000552839 MAP1AP78559 2803 aaPredicted RBP10.23□□□□□ -0.77
TMEM116-218ENST00000552839 TMED7-TICAM2A0A0A6YYA0 188 aa10.22□□□□□ -0.77
TMEM116-218ENST00000552839 A0A1B0GWA3 101 aa10.22□□□□□ -0.77
TMEM116-218ENST00000552839 TRAPPC13A5PLN9 417 aa10.22□□□□□ -0.77
TMEM116-218ENST00000552839 H0YHG0 523 aa10.22□□□□□ -0.77
TMEM116-218ENST00000552839 OR5F1O95221 314 aa10.22□□□□□ -0.77
TMEM116-218ENST00000552839 HEXAP06865 529 aa10.22□□□□□ -0.77
TMEM116-218ENST00000552839 UMPSP11172 480 aa10.22□□□□□ -0.77
TMEM116-218ENST00000552839 ADH6P28332 368 aa10.22□□□□□ -0.77
TMEM116-218ENST00000552839 YAP1P46937 504 aaKnown RBP10.22□□□□□ -0.77
TMEM116-218ENST00000552839 CRYBA2P53672 197 aa10.22□□□□□ -0.77
TMEM116-218ENST00000552839 SMIM11AP58511 58 aa10.22□□□□□ -0.77
TMEM116-218ENST00000552839 SF3B4Q15427 424 aaKnown RBP eCLIP10.22□□□□□ -0.77
TMEM116-218ENST00000552839 SGCBQ16585 318 aa10.22□□□□□ -0.77
TMEM116-218ENST00000552839 FGD3Q5JSP0 725 aa10.22□□□□□ -0.77
TMEM116-218ENST00000552839 ZNF613Q6PF04 617 aa10.22□□□□□ -0.77
TMEM116-218ENST00000552839 ULK3Q6PHR2 472 aa10.22□□□□□ -0.77
TMEM116-218ENST00000552839 SEM1Q6ZVN7 128 aa10.22□□□□□ -0.77
TMEM116-218ENST00000552839 RRM2BQ7LG56 351 aa10.22□□□□□ -0.77
TMEM116-218ENST00000552839 RBM45Q8IUH3 476 aaKnown RBP10.22□□□□□ -0.77
TMEM116-218ENST00000552839 LACC1Q8IV20 430 aa10.22□□□□□ -0.77
TMEM116-218ENST00000552839 PM20D2Q8IYS1 436 aa10.22□□□□□ -0.77
TMEM116-218ENST00000552839 C10orf53Q8N6V4 93 aa10.22□□□□□ -0.77
TMEM116-218ENST00000552839 ZHX1-C8orf76Q96EF9 292 aa10.22□□□□□ -0.77
TMEM116-218ENST00000552839 SLC41A3Q96GZ6 507 aa10.22□□□□□ -0.77
TMEM116-218ENST00000552839 EPYCQ99645 322 aa10.22□□□□□ -0.77
TMEM116-218ENST00000552839 TAPBPLQ9BX59 468 aa10.22□□□□□ -0.77
TMEM116-218ENST00000552839 MAGIXQ9H6Y5 334 aa10.22□□□□□ -0.77
TMEM116-218ENST00000552839 PLEKHF2Q9H8W4 249 aa10.22□□□□□ -0.77
TMEM116-218ENST00000552839 KRCC1Q9NPI7 259 aaPredicted RBP10.22□□□□□ -0.77
TMEM116-218ENST00000552839 TIGARQ9NQ88 270 aa10.22□□□□□ -0.77
TMEM116-218ENST00000552839 SPRR3Q9UBC9 169 aa10.22□□□□□ -0.77
TMEM116-218ENST00000552839 SLC7A7Q9UM01 511 aa10.22□□□□□ -0.77
TMEM116-218ENST00000552839 TMED7Q9Y3B3 224 aa10.22□□□□□ -0.77
TMEM116-218ENST00000552839 MRPS18CQ9Y3D5 142 aaKnown RBP10.22□□□□□ -0.77
TMEM116-218ENST00000552839 ENPP4Q9Y6X5 453 aa10.22□□□□□ -0.77
TMEM116-218ENST00000552839 HRNRQ86YZ3 2850 aaPredicted RBP10.21□□□□□ -0.77
TMEM116-218ENST00000552839 C7orf72A4D263 438 aa10.21□□□□□ -0.77
TMEM116-218ENST00000552839 EIF1AYO14602 144 aaKnown RBP10.21□□□□□ -0.77
TMEM116-218ENST00000552839 ACOT8O14734 319 aa10.21□□□□□ -0.77
TMEM116-218ENST00000552839 TPST2O60704 377 aa10.21□□□□□ -0.77
TMEM116-218ENST00000552839 AHSA1O95433 338 aa10.21□□□□□ -0.77
TMEM116-218ENST00000552839 LY6G6DO95868 133 aa10.21□□□□□ -0.77
TMEM116-218ENST00000552839 EPPINO95925 133 aa10.21□□□□□ -0.77
TMEM116-218ENST00000552839 RAP2AP10114 183 aa10.21□□□□□ -0.77
TMEM116-218ENST00000552839 GABRA1P14867 456 aa10.21□□□□□ -0.77
TMEM116-218ENST00000552839 BMP5P22003 454 aa10.21□□□□□ -0.77
TMEM116-218ENST00000552839 CHMP24386 653 aa10.21□□□□□ -0.77
TMEM116-218ENST00000552839 FKBP2P26885 142 aaKnown RBP10.21□□□□□ -0.77
TMEM116-218ENST00000552839 HTR2AP28223 471 aa10.21□□□□□ -0.77
TMEM116-218ENST00000552839 ACAA2P42765 397 aaKnown RBP10.21□□□□□ -0.77
TMEM116-218ENST00000552839 ASCL1P50553 236 aa10.21□□□□□ -0.77
TMEM116-218ENST00000552839 ZNF136P52737 540 aa10.21□□□□□ -0.77
TMEM116-218ENST00000552839 ST3GAL3Q11203 375 aa10.21□□□□□ -0.77
TMEM116-218ENST00000552839 KPNB1Q14974 876 aaKnown RBP10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms