RNA–Protein interactions for RNA: ENST00000552783.5

LIMA1-214, Transcript of LIM domain and actin binding 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LIMA1, Length 3,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-214ENST00000552783 BCL2L10Q9HD36 194 aa4.47□□□□□ -1.69
LIMA1-214ENST00000552783 C2orf42Q9NWW7 574 aa4.47□□□□□ -1.69
LIMA1-214ENST00000552783 USP36Q9P275 1121 aaKnown RBP4.47□□□□□ -1.69
LIMA1-214ENST00000552783 COPZ2Q9P299 210 aa4.47□□□□□ -1.69
LIMA1-214ENST00000552783 ZNF860A6NHJ4 632 aa4.47□□□□□ -1.69
LIMA1-214ENST00000552783 C1QTNF3-AMACRE9PGA6 284 aa4.47□□□□□ -1.69
LIMA1-214ENST00000552783 NDUFS4O43181 175 aa4.47□□□□□ -1.69
LIMA1-214ENST00000552783 DNAJB6O75190 326 aa4.47□□□□□ -1.69
LIMA1-214ENST00000552783 ATG12O94817 140 aa4.47□□□□□ -1.69
LIMA1-214ENST00000552783 OR5F1O95221 314 aa4.47□□□□□ -1.69
LIMA1-214ENST00000552783 MT-ND5P03915 603 aa4.47□□□□□ -1.69
LIMA1-214ENST00000552783 RPN2P04844 631 aa4.47□□□□□ -1.69
LIMA1-214ENST00000552783 ATP1B1P05026 303 aa4.47□□□□□ -1.69
LIMA1-214ENST00000552783 GIPP09681 153 aaPredicted RBP4.47□□□□□ -1.69
LIMA1-214ENST00000552783 CEBPBP17676 345 aa4.47□□□□□ -1.69
LIMA1-214ENST00000552783 RAB3AP20336 220 aa4.47□□□□□ -1.69
LIMA1-214ENST00000552783 NT5EP21589 574 aa4.47□□□□□ -1.69
LIMA1-214ENST00000552783 GALP22466 123 aa4.47□□□□□ -1.69
LIMA1-214ENST00000552783 GRPRP30550 384 aa4.47□□□□□ -1.69
LIMA1-214ENST00000552783 STAT5AP42229 794 aa4.47□□□□□ -1.69
LIMA1-214ENST00000552783 RGS8P57771 180 aaPredicted RBP4.47□□□□□ -1.69
LIMA1-214ENST00000552783 TAS2R38P59533 333 aa4.47□□□□□ -1.69
LIMA1-214ENST00000552783 SORDQ00796 357 aa4.47□□□□□ -1.69
LIMA1-214ENST00000552783 FOXK2Q01167 660 aa4.47□□□□□ -1.69
LIMA1-214ENST00000552783 ST3GAL3Q11203 375 aa4.47□□□□□ -1.69
LIMA1-214ENST00000552783 GUCA2BQ16661 112 aa4.47□□□□□ -1.69
LIMA1-214ENST00000552783 GXYLT1Q4G148 440 aa4.47□□□□□ -1.69
LIMA1-214ENST00000552783 HSD17B12Q53GQ0 312 aa4.47□□□□□ -1.69
LIMA1-214ENST00000552783 IGSF11Q5DX21 431 aa4.47□□□□□ -1.69
LIMA1-214ENST00000552783 PDSS1Q5T2R2 415 aa4.47□□□□□ -1.69
LIMA1-214ENST00000552783 FAM46CQ5VWP2 391 aa4.47□□□□□ -1.69
LIMA1-214ENST00000552783 ZNF626Q68DY1 528 aa4.47□□□□□ -1.69
LIMA1-214ENST00000552783 GSG1LQ6UXU4 331 aa4.47□□□□□ -1.69
LIMA1-214ENST00000552783 MBOAT2Q6ZWT7 520 aa4.47□□□□□ -1.69
LIMA1-214ENST00000552783 SPRED2Q7Z698 418 aa4.47□□□□□ -1.69
LIMA1-214ENST00000552783 SFTPA1Q8IWL2 248 aa4.47□□□□□ -1.69
LIMA1-214ENST00000552783 MUC20Q8N307 709 aaPredicted RBP4.47□□□□□ -1.69
LIMA1-214ENST00000552783 LINC01555Q8NAE3 123 aa4.47□□□□□ -1.69
LIMA1-214ENST00000552783 KCT2Q8NC54 265 aa4.47□□□□□ -1.69
LIMA1-214ENST00000552783 OR5M9Q8NGP3 310 aa4.47□□□□□ -1.69
LIMA1-214ENST00000552783 FANK1Q8TC84 345 aa4.47□□□□□ -1.69
LIMA1-214ENST00000552783 C2CD4CQ8TF44 421 aa4.47□□□□□ -1.69
LIMA1-214ENST00000552783 NXPE3Q969Y0 559 aa4.47□□□□□ -1.69
LIMA1-214ENST00000552783 ZNF75AQ96N20 296 aa4.47□□□□□ -1.69
LIMA1-214ENST00000552783 PINK1Q9BXM7 581 aa4.47□□□□□ -1.69
LIMA1-214ENST00000552783 TSPAN10Q9H1Z9 355 aaPredicted RBP4.47□□□□□ -1.69
LIMA1-214ENST00000552783 NOX4Q9NPH5 578 aa4.47□□□□□ -1.69
LIMA1-214ENST00000552783 TMEM74BQ9NUR3 256 aa4.47□□□□□ -1.69
LIMA1-214ENST00000552783 SIDT1Q9NXL6 827 aaKnown RBP4.47□□□□□ -1.69
LIMA1-214ENST00000552783 PRELID3BQ9Y3B1 194 aa4.47□□□□□ -1.69
LIMA1-214ENST00000552783 OBSL1O75147 1896 aa4.47□□□□□ -1.69
LIMA1-214ENST00000552783 A0A0A6YYD5 115 aa4.47□□□□□ -1.69
LIMA1-214ENST00000552783 A0A1B0GTH9 108 aa4.47□□□□□ -1.69
LIMA1-214ENST00000552783 A0A1W2PPV9 198 aa4.47□□□□□ -1.69
LIMA1-214ENST00000552783 PRR23D1E9PI22 279 aaPredicted RBP4.47□□□□□ -1.69
LIMA1-214ENST00000552783 H0YC42 278 aa4.47□□□□□ -1.69
LIMA1-214ENST00000552783 GOSR2O14653 212 aa4.47□□□□□ -1.69
LIMA1-214ENST00000552783 GNB5O14775 395 aa4.47□□□□□ -1.69
LIMA1-214ENST00000552783 FLRT2O43155 660 aa4.47□□□□□ -1.69
LIMA1-214ENST00000552783 GSTZ1O43708 216 aaPredicted RBP4.47□□□□□ -1.69
LIMA1-214ENST00000552783 ADAM11O75078 769 aa4.47□□□□□ -1.69
LIMA1-214ENST00000552783 KHDRBS3O75525 346 aaKnown RBP4.47□□□□□ -1.69
LIMA1-214ENST00000552783 RP2O75695 350 aa4.47□□□□□ -1.69
LIMA1-214ENST00000552783 OLFM2O95897 454 aa4.47□□□□□ -1.69
LIMA1-214ENST00000552783 FGBP02675 491 aa4.47□□□□□ -1.69
LIMA1-214ENST00000552783 ASGR2P07307 311 aa4.47□□□□□ -1.69
LIMA1-214ENST00000552783 PRR23D2P0DMB1 279 aaPredicted RBP4.47□□□□□ -1.69
LIMA1-214ENST00000552783 ADRB3P13945 408 aa4.47□□□□□ -1.69
LIMA1-214ENST00000552783 IFNGR1P15260 489 aa4.47□□□□□ -1.69
LIMA1-214ENST00000552783 ADCYAP1P18509 176 aa4.47□□□□□ -1.69
LIMA1-214ENST00000552783 SLC2A5P22732 501 aa4.47□□□□□ -1.69
LIMA1-214ENST00000552783 CDK2P24941 298 aa4.47□□□□□ -1.69
LIMA1-214ENST00000552783 DPP4P27487 766 aa4.47□□□□□ -1.69
LIMA1-214ENST00000552783 GDI2P50395 445 aaKnown RBP4.47□□□□□ -1.69
LIMA1-214ENST00000552783 P2RX1P51575 399 aa4.47□□□□□ -1.69
LIMA1-214ENST00000552783 EPHA4P54764 986 aa4.47□□□□□ -1.69
LIMA1-214ENST00000552783 NANOS3P60323 173 aaKnown RBP4.47□□□□□ -1.69
LIMA1-214ENST00000552783 PPP2CBP62714 309 aa4.47□□□□□ -1.69
LIMA1-214ENST00000552783 PPP2CAP67775 309 aa4.47□□□□□ -1.69
LIMA1-214ENST00000552783 SRSF3P84103 164 aaKnown RBP4.47□□□□□ -1.69
LIMA1-214ENST00000552783 BDH1Q02338 343 aa4.47□□□□□ -1.69
LIMA1-214ENST00000552783 GUCA2AQ02747 115 aa4.47□□□□□ -1.69
LIMA1-214ENST00000552783 PLAURQ03405 335 aa4.47□□□□□ -1.69
LIMA1-214ENST00000552783 TGM3Q08188 693 aa4.47□□□□□ -1.69
LIMA1-214ENST00000552783 DECR1Q16698 335 aa4.47□□□□□ -1.69
LIMA1-214ENST00000552783 PABPC1L2AQ5JQF8 200 aa4.47□□□□□ -1.69
LIMA1-214ENST00000552783 METTL11BQ5VVY1 283 aa4.47□□□□□ -1.69
LIMA1-214ENST00000552783 CDC73Q6P1J9 531 aa4.47□□□□□ -1.69
LIMA1-214ENST00000552783 VITQ6UXI7 678 aa4.47□□□□□ -1.69
LIMA1-214ENST00000552783 TPRA1Q86W33 373 aa4.47□□□□□ -1.69
LIMA1-214ENST00000552783 NUDT13Q86X67 352 aa4.47□□□□□ -1.69
LIMA1-214ENST00000552783 SLITRK4Q8IW52 837 aa4.47□□□□□ -1.69
LIMA1-214ENST00000552783 OR4N5Q8IXE1 308 aa4.47□□□□□ -1.69
LIMA1-214ENST00000552783 CRIPAKQ8N1N5 446 aa4.47□□□□□ -1.69
LIMA1-214ENST00000552783 SLC44A3Q8N4M1 653 aa4.47□□□□□ -1.69
LIMA1-214ENST00000552783 SPICQ8N5J4 248 aa4.47□□□□□ -1.69
LIMA1-214ENST00000552783 ZPLD1Q8TCW7 415 aa4.47□□□□□ -1.69
LIMA1-214ENST00000552783 RGP1Q92546 391 aaPredicted RBP4.47□□□□□ -1.69
LIMA1-214ENST00000552783 MENTQ9BUN1 341 aa4.47□□□□□ -1.69
LIMA1-214ENST00000552783 TEX12Q9BXU0 123 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms